Sida yellow net virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_000905775.1
Isolate Brazil
Release date 2015/2/22
Submitter Tavares,S.S., Ramos-Sobrinho,R., Gonzales-Aguilera,J., Lima,G.S.A., Assuncao,I.P., Zerbini,F.M.
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_020253
ACCGGATGGCCGCGCGATTTCTCCCCCCCCCCTACGTGGCGCTCTGGTGGCCGCTCGATCCCCCCACCCGCTCGCGTGGAGTCCCCCCGTACCCGCGCGCTCATCAAATTTAATTTGAATTAAAGGTTTTATCTTTTGTTTAGCCAATGATATTGCGCCTGAGAAGCTTAGATATCTGTGTAATACTTCGTCCCCAAGTTTTATAACCCCTATAAAACTAAAGCATTAATGACGTCATACTTTAATTCAGGAATGCCTAAGCGGGATCCCTCATGGCGCCAGATGGCGGGAACCTCAAAGGTTAGCCGCACTTCCAATTTCTCACCTCGTGGAGGTGGAGGCCCAAAATTCAACAAGGCCTCAGAATGGGTTAACAGGCCCATGTACAGGAAGCCCAGGATATATCGGACGCTGAGAACACCTGATGTGCCTAGAGGCTGTGAAGGACCCTGTAAGGTCCAGTCGTACGAGCAACGTCACGATATCTCCCATGTTGGGAAGGTGATGTGTATATCTGATATTACTCGCGGTAACGGTATTACCCACCGTGTAGGTAAGCGTTTTTGTGTTAAGTCTGTGTACATTCTAGGTAAGGTGTGGATGGACGAGAACATCAAGCTCAAGAACCACACGAACAGTTGCATGTTCTGGTTGGTCAGGGACCGTAGACCGTATGGCACACCTATGGATTTTGGCCAGGTATTCAACATGTTCGACAACGAGCCTAGCACTGCAACCGTGAAGAACGATCTGCGTGATCGTTTCCAAGTCATGCATAAGTTCTATGCCAAGGTCACTGGTGGACAGTATGCCAGCAACGAGCAGGCGCTGGTCAAGCGTTTCTGGAAGGTCAACAATCATGTAGTTTATAATCACCAGGAAGCTGGGAAGTACGAGAATCATACAGAGAACGCTTTATTATTGTATATGGCATGTACTCATGCCTCTAACCCTGTGTATGCAACGCTCAAGATTCGAATCTATTTCTACGATTCGATCACCAATTAATAAAGCTTAAATTTTATTGAATGATTTTCCAGTACATATCTGACGTAAGATCTGTCAGTCGCATAACGAACAGCTCTAATTACATTGTTTATCGTAATAACACCTAATCGGTCTAAATACATCATGACTAAATGTCTAAATCTAATCAAATAAGTCGTTCCAGAAGCTGTCAGAGATGTCGTCCAGACTTGGAAGTTCAGGAATGCCTTGTGGAGATCCAATGCTTTCCTGAGGTTGTGGTTGAACCGTATCTGTACGTGGTACACTCTGGTCGTCGTGTACAACATGTCCTCTACGTGGTATATCTTGAAATACAGGGGATTTGTTATCTCCCAGATATAGACGCCATTCTCTGCCTGAGGCGCAGTGATGAGTTCCCCGGTGCGTGAATCCATGATTGCTGCAGTTGATGTGGACGTAGACGGTGCACCCGCACTGTATATCAATTCTTCTACGGCGAGTTCCTCTCCTCTTCGCCGCTCTGTGTTGCACTTTGATACAGGGGGGAGTCGAGGAAGATGAATTTTGCATTGTGGAGTGTCCACGACTTTAATGCTGCATTCTCCTCTTTGTCTAGGTACTCTTTATAACTGACTCCCTCCCCCTGGATTGCAGAGCACGATTGATGGTATCCCACCTTTAATTTTGAACTGGCTTTTCCGTACTTGCAATTTGACTGCCAGTCTTTTTGAGCACCAATCAACTCCTTCCAGTGCTTTAACTTTAGATATTGCGGGTTGACGTCATCAATGACGTTGTATTCCACTTCGTTCGAGTAAACCCTAGAATTGAAGTCGAGATGACCACTCAAGTAATTATGTGGGCCTAACGCACGAGCCCACATCGTCTTCCCTGTTCGACTATCACCTTCGACTATCAAACTCATAGGTCTCAATGGCCGCGCAGCGGAACCCCTTCCAAAATACTCATCCGCCCACTCTTGCATCTCGTCGGGAACGTTAGTGAAGGAGGATAGGGGAAACGGAGGAACCCACGGCTCCGGAGCCTTTGTGAAAATTCTATTTAAATTAGAATTTAAATTGTGAAATTGAAAAAGAAATTTTTCCGGCAATTTCTCCCTAATTATTTGCAGAGCCGTCTGTTTATCCGGAGCATTTAACGCCTCAGCTGCAGCATCATTAGCTGTCTGTTGGCCTCCTCTAGCACTTCTTCCGTCGACCTGGAACTGTCCCCATTCAATTGTATCTCCGTCTTTGTCGATGTAGGACTTGACGTCGGAGCTGGATTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCTTGTTGGGGATACCAGGTCGAACAATCTATTATTCGTGCACTGGAATTTCCCTTCGAACTGGAGAAGGACGTGGAGATGAGGCTCCCCATTTTCATGAAGCTCTCTGCATATTTTGATGAATTTCTTGTTGACCGGTGTTTGAATGTCAAGAAATTGGGAAAGTGTTTCTTCTTTGGTTAACGAACACCGGGGATATGTTATGAAATAGTTTTTGGCTTTTATACAGAAAGAACCCTTCCGTGGCATTTTTGTAAATAAGGCTGTGTACCCCCGATTGCTCTCCGCTCTAAAACTCCTATGAATTGGGGGTACTGGGGGTACATTTATACTAGAAGTTCCTATAGGACTTAAAGGGGTACGTGGCGGCCATCCGCTATAATATT

Gene Information

NCBI Accession YP_007438865.1
Location 253-1008
Protein Name coat protein
Coding Region ATGCCTAAGCGGGATCCCTCATGGCGCCAGATGGCGGGAACCTCAAAGGTTAGCCGCACTTCCAATTTCTCACCTCGTGGAGGTGGAGGCCCAAAATTCAACAAGGCCTCAGAATGGGTTAACAGGCCCATGTACAGGAAGCCCAGGATATATCGGACGCTGAGAACACCTGATGTGCCTAGAGGCTGTGAAGGACCCTGTAAGGTCCAGTCGTACGAGCAACGTCACGATATCTCCCATGTTGGGAAGGTGATGTGTATATCTGATATTACTCGCGGTAACGGTATTACCCACCGTGTAGGTAAGCGTTTTTGTGTTAAGTCTGTGTACATTCTAGGTAAGGTGTGGATGGACGAGAACATCAAGCTCAAGAACCACACGAACAGTTGCATGTTCTGGTTGGTCAGGGACCGTAGACCGTATGGCACACCTATGGATTTTGGCCAGGTATTCAACATGTTCGACAACGAGCCTAGCACTGCAACCGTGAAGAACGATCTGCGTGATCGTTTCCAAGTCATGCATAAGTTCTATGCCAAGGTCACTGGTGGACAGTATGCCAGCAACGAGCAGGCGCTGGTCAAGCGTTTCTGGAAGGTCAACAATCATGTAGTTTATAATCACCAGGAAGCTGGGAAGTACGAGAATCATACAGAGAACGCTTTATTATTGTATATGGCATGTACTCATGCCTCTAACCCTGTGTATGCAACGCTCAAGATTCGAATCTATTTCTACGATTCGATCACCAATTAA
Protein Sequence MPKRDPSWRQMAGTSKVSRTSNFSPRGGGGPKFNKASEWVNRPMYRKPRIYRTLRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDITRGNGITHRVGKRFCVKSVYILGKVWMDENIKLKNHTNSCMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRFQVMHKFYAKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSITN

NCBI Accession YP_007438866.1
Location 1005-1403
Protein Name replication-enhancer protein
Coding Region ATGGATTCACGCACCGGGGAACTCATCACTGCGCCTCAGGCAGAGAATGGCGTCTATATCTGGGAGATAACAAATCCCCTGTATTTCAAGATATACCACGTAGAGGACATGTTGTACACGACGACCAGAGTGTACCACGTACAGATACGGTTCAACCACAACCTCAGGAAAGCATTGGATCTCCACAAGGCATTCCTGAACTTCCAAGTCTGGACGACATCTCTGACAGCTTCTGGAACGACTTATTTGATTAGATTTAGACATTTAGTCATGATGTATTTAGACCGATTAGGTGTTATTACGATAAACAATGTAATTAGAGCTGTTCGTTATGCGACTGACAGATCTTACGTCAGATATGTACTGGAAAATCATTCAATAAAATTTAAGCTTTATTAA
Protein Sequence MDSRTGELITAPQAENGVYIWEITNPLYFKIYHVEDMLYTTTRVYHVQIRFNHNLRKALDLHKAFLNFQVWTTSLTASGTTYLIRFRHLVMMYLDRLGVITINNVIRAVRYATDRSYVRYVLENHSIKFKLY

NCBI Accession YP_007438867.1
Location 1150-1539
Protein Name transactivating protein
Coding Region ATGCAAAATTCATCTTCCTCGACTCCCCCCTGTATCAAAGTGCAACACAGAGCGGCGAAGAGGAGAGGAACTCGCCGTAGAAGAATTGATATACAGTGCGGGTGCACCGTCTACGTCCACATCAACTGCAGCAATCATGGATTCACGCACCGGGGAACTCATCACTGCGCCTCAGGCAGAGAATGGCGTCTATATCTGGGAGATAACAAATCCCCTGTATTTCAAGATATACCACGTAGAGGACATGTTGTACACGACGACCAGAGTGTACCACGTACAGATACGGTTCAACCACAACCTCAGGAAAGCATTGGATCTCCACAAGGCATTCCTGAACTTCCAAGTCTGGACGACATCTCTGACAGCTTCTGGAACGACTTATTTGATTAG
Protein Sequence MQNSSSSTPPCIKVQHRAAKRRGTRRRRIDIQCGCTVYVHINCSNHGFTHRGTHHCASGREWRLYLGDNKSPVFQDIPRRGHVVHDDQSVPRTDTVQPQPQESIGSPQGIPELPSLDDISDSFWNDLFD

NCBI Accession YP_007438868.1
Location 1460-2539
Protein Name replication-associated protein
Coding Region ATGCCACGGAAGGGTTCTTTCTGTATAAAAGCCAAAAACTATTTCATAACATATCCCCGGTGTTCGTTAACCAAAGAAGAAACACTTTCCCAATTTCTTGACATTCAAACACCGGTCAACAAGAAATTCATCAAAATATGCAGAGAGCTTCATGAAAATGGGGAGCCTCATCTCCACGTCCTTCTCCAGTTCGAAGGGAAATTCCAGTGCACGAATAATAGATTGTTCGACCTGGTATCCCCAACAAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAAGACGGAGATACAATTGAATGGGGACAGTTCCAGGTCGACGGAAGAAGTGCTAGAGGAGGCCAACAGACAGCTAATGATGCTGCAGCTGAGGCGTTAAATGCTCCGGATAAACAGACGGCTCTGCAAATAATTAGGGAGAAATTGCCGGAAAAATTTCTTTTTCAATTTCACAATTTAAATTCTAATTTAAATAGAATTTTCACAAAGGCTCCGGAGCCGTGGGTTCCTCCGTTTCCCCTATCCTCCTTCACTAACGTTCCCGACGAGATGCAAGAGTGGGCGGATGAGTATTTTGGAAGGGGTTCCGCTGCGCGGCCATTGAGACCTATGAGTTTGATAGTCGAAGGTGATAGTCGAACAGGGAAGACGATGTGGGCTCGTGCGTTAGGCCCACATAATTACTTGAGTGGTCATCTCGACTTCAATTCTAGGGTTTACTCGAACGAAGTGGAATACAACGTCATTGATGACGTCAACCCGCAATATCTAAAGTTAAAGCACTGGAAGGAGTTGATTGGTGCTCAAAAAGACTGGCAGTCAAATTGCAAGTACGGAAAAGCCAGTTCAAAATTAAAGGTGGGATACCATCAATCGTGCTCTGCAATCCAGGGGGAGGGAGTCAGTTATAAAGAGTACCTAGACAAAGAGGAGAATGCAGCATTAAAGTCGTGGACACTCCACAATGCAAAATTCATCTTCCTCGACTCCCCCCTGTATCAAAGTGCAACACAGAGCGGCGAAGAGGAGAGGAACTCGCCGTAG
Protein Sequence MPRKGSFCIKAKNYFITYPRCSLTKEETLSQFLDIQTPVNKKFIKICRELHENGEPHLHVLLQFEGKFQCTNNRLFDLVSPTRSAHFHPNIQGAKSSSDVKSYIDKDGDTIEWGQFQVDGRSARGGQQTANDAAAEALNAPDKQTALQIIREKLPEKFLFQFHNLNSNLNRIFTKAPEPWVPPFPLSSFTNVPDEMQEWADEYFGRGSAARPLRPMSLIVEGDSRTGKTMWARALGPHNYLSGHLDFNSRVYSNEVEYNVIDDVNPQYLKLKHWKELIGAQKDWQSNCKYGKASSKLKVGYHQSCSAIQGEGVSYKEYLDKEENAALKSWTLHNAKFIFLDSPLYQSATQSGEEERNSP

NCBI Accession YP_007438869.1
Location 2125-2382
Protein Name AC4 protein
Coding Region ATGGGGAGCCTCATCTCCACGTCCTTCTCCAGTTCGAAGGGAAATTCCAGTGCACGAATAATAGATTGTTCGACCTGGTATCCCCAACAAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAAGACGGAGATACAATTGAATGGGGACAGTTCCAGGTCGACGGAAGAAGTGCTAGAGGAGGCCAACAGACAGCTAATGATGCTGCAGCTGAGGCGTTAA
Protein Sequence MGSLISTSFSSSKGNSSARIIDCSTWYPQQGQHISIRTFRELNPAPTSSPTSTKTEIQLNGDSSRSTEEVLEEANRQLMMLQLRR