Sida yellow net virus
Basic Information
Genus |
Begomovirus
|
NCBI Assembly |
GCF_000905775.1 |
Isolate |
Brazil |
Release date |
2015/2/22 |
Submitter |
Tavares,S.S., Ramos-Sobrinho,R., Gonzales-Aguilera,J., Lima,G.S.A., Assuncao,I.P., Zerbini,F.M. |
Vector |
|
Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCGCGATTTCTCCCCCCCCCCTACGTGGCGCTCTGGTGGCCGCTCGATCCCCCCACCCGCTCGCGTGGAGTCCCCCCGTACCCGCGCGCTCATCAAATTTAATTTGAATTAAAGGTTTTATCTTTTGTTTAGCCAATGATATTGCGCCTGAGAAGCTTAGATATCTGTGTAATACTTCGTCCCCAAGTTTTATAACCCCTATAAAACTAAAGCATTAATGACGTCATACTTTAATTCAGGAATGCCTAAGCGGGATCCCTCATGGCGCCAGATGGCGGGAACCTCAAAGGTTAGCCGCACTTCCAATTTCTCACCTCGTGGAGGTGGAGGCCCAAAATTCAACAAGGCCTCAGAATGGGTTAACAGGCCCATGTACAGGAAGCCCAGGATATATCGGACGCTGAGAACACCTGATGTGCCTAGAGGCTGTGAAGGACCCTGTAAGGTCCAGTCGTACGAGCAACGTCACGATATCTCCCATGTTGGGAAGGTGATGTGTATATCTGATATTACTCGCGGTAACGGTATTACCCACCGTGTAGGTAAGCGTTTTTGTGTTAAGTCTGTGTACATTCTAGGTAAGGTGTGGATGGACGAGAACATCAAGCTCAAGAACCACACGAACAGTTGCATGTTCTGGTTGGTCAGGGACCGTAGACCGTATGGCACACCTATGGATTTTGGCCAGGTATTCAACATGTTCGACAACGAGCCTAGCACTGCAACCGTGAAGAACGATCTGCGTGATCGTTTCCAAGTCATGCATAAGTTCTATGCCAAGGTCACTGGTGGACAGTATGCCAGCAACGAGCAGGCGCTGGTCAAGCGTTTCTGGAAGGTCAACAATCATGTAGTTTATAATCACCAGGAAGCTGGGAAGTACGAGAATCATACAGAGAACGCTTTATTATTGTATATGGCATGTACTCATGCCTCTAACCCTGTGTATGCAACGCTCAAGATTCGAATCTATTTCTACGATTCGATCACCAATTAATAAAGCTTAAATTTTATTGAATGATTTTCCAGTACATATCTGACGTAAGATCTGTCAGTCGCATAACGAACAGCTCTAATTACATTGTTTATCGTAATAACACCTAATCGGTCTAAATACATCATGACTAAATGTCTAAATCTAATCAAATAAGTCGTTCCAGAAGCTGTCAGAGATGTCGTCCAGACTTGGAAGTTCAGGAATGCCTTGTGGAGATCCAATGCTTTCCTGAGGTTGTGGTTGAACCGTATCTGTACGTGGTACACTCTGGTCGTCGTGTACAACATGTCCTCTACGTGGTATATCTTGAAATACAGGGGATTTGTTATCTCCCAGATATAGACGCCATTCTCTGCCTGAGGCGCAGTGATGAGTTCCCCGGTGCGTGAATCCATGATTGCTGCAGTTGATGTGGACGTAGACGGTGCACCCGCACTGTATATCAATTCTTCTACGGCGAGTTCCTCTCCTCTTCGCCGCTCTGTGTTGCACTTTGATACAGGGGGGAGTCGAGGAAGATGAATTTTGCATTGTGGAGTGTCCACGACTTTAATGCTGCATTCTCCTCTTTGTCTAGGTACTCTTTATAACTGACTCCCTCCCCCTGGATTGCAGAGCACGATTGATGGTATCCCACCTTTAATTTTGAACTGGCTTTTCCGTACTTGCAATTTGACTGCCAGTCTTTTTGAGCACCAATCAACTCCTTCCAGTGCTTTAACTTTAGATATTGCGGGTTGACGTCATCAATGACGTTGTATTCCACTTCGTTCGAGTAAACCCTAGAATTGAAGTCGAGATGACCACTCAAGTAATTATGTGGGCCTAACGCACGAGCCCACATCGTCTTCCCTGTTCGACTATCACCTTCGACTATCAAACTCATAGGTCTCAATGGCCGCGCAGCGGAACCCCTTCCAAAATACTCATCCGCCCACTCTTGCATCTCGTCGGGAACGTTAGTGAAGGAGGATAGGGGAAACGGAGGAACCCACGGCTCCGGAGCCTTTGTGAAAATTCTATTTAAATTAGAATTTAAATTGTGAAATTGAAAAAGAAATTTTTCCGGCAATTTCTCCCTAATTATTTGCAGAGCCGTCTGTTTATCCGGAGCATTTAACGCCTCAGCTGCAGCATCATTAGCTGTCTGTTGGCCTCCTCTAGCACTTCTTCCGTCGACCTGGAACTGTCCCCATTCAATTGTATCTCCGTCTTTGTCGATGTAGGACTTGACGTCGGAGCTGGATTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCTTGTTGGGGATACCAGGTCGAACAATCTATTATTCGTGCACTGGAATTTCCCTTCGAACTGGAGAAGGACGTGGAGATGAGGCTCCCCATTTTCATGAAGCTCTCTGCATATTTTGATGAATTTCTTGTTGACCGGTGTTTGAATGTCAAGAAATTGGGAAAGTGTTTCTTCTTTGGTTAACGAACACCGGGGATATGTTATGAAATAGTTTTTGGCTTTTATACAGAAAGAACCCTTCCGTGGCATTTTTGTAAATAAGGCTGTGTACCCCCGATTGCTCTCCGCTCTAAAACTCCTATGAATTGGGGGTACTGGGGGTACATTTATACTAGAAGTTCCTATAGGACTTAAAGGGGTACGTGGCGGCCATCCGCTATAATATT
Gene Information
NCBI Accession
|
YP_007438865.1
|
Location
|
253-1008 |
Protein Name
|
coat protein |
Coding Region
|
ATGCCTAAGCGGGATCCCTCATGGCGCCAGATGGCGGGAACCTCAAAGGTTAGCCGCACTTCCAATTTCTCACCTCGTGGAGGTGGAGGCCCAAAATTCAACAAGGCCTCAGAATGGGTTAACAGGCCCATGTACAGGAAGCCCAGGATATATCGGACGCTGAGAACACCTGATGTGCCTAGAGGCTGTGAAGGACCCTGTAAGGTCCAGTCGTACGAGCAACGTCACGATATCTCCCATGTTGGGAAGGTGATGTGTATATCTGATATTACTCGCGGTAACGGTATTACCCACCGTGTAGGTAAGCGTTTTTGTGTTAAGTCTGTGTACATTCTAGGTAAGGTGTGGATGGACGAGAACATCAAGCTCAAGAACCACACGAACAGTTGCATGTTCTGGTTGGTCAGGGACCGTAGACCGTATGGCACACCTATGGATTTTGGCCAGGTATTCAACATGTTCGACAACGAGCCTAGCACTGCAACCGTGAAGAACGATCTGCGTGATCGTTTCCAAGTCATGCATAAGTTCTATGCCAAGGTCACTGGTGGACAGTATGCCAGCAACGAGCAGGCGCTGGTCAAGCGTTTCTGGAAGGTCAACAATCATGTAGTTTATAATCACCAGGAAGCTGGGAAGTACGAGAATCATACAGAGAACGCTTTATTATTGTATATGGCATGTACTCATGCCTCTAACCCTGTGTATGCAACGCTCAAGATTCGAATCTATTTCTACGATTCGATCACCAATTAA |
Protein Sequence
|
MPKRDPSWRQMAGTSKVSRTSNFSPRGGGGPKFNKASEWVNRPMYRKPRIYRTLRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDITRGNGITHRVGKRFCVKSVYILGKVWMDENIKLKNHTNSCMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRFQVMHKFYAKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSITN |
NCBI Accession
|
YP_007438866.1
|
Location
|
1005-1403 |
Protein Name
|
replication-enhancer protein |
Coding Region
|
ATGGATTCACGCACCGGGGAACTCATCACTGCGCCTCAGGCAGAGAATGGCGTCTATATCTGGGAGATAACAAATCCCCTGTATTTCAAGATATACCACGTAGAGGACATGTTGTACACGACGACCAGAGTGTACCACGTACAGATACGGTTCAACCACAACCTCAGGAAAGCATTGGATCTCCACAAGGCATTCCTGAACTTCCAAGTCTGGACGACATCTCTGACAGCTTCTGGAACGACTTATTTGATTAGATTTAGACATTTAGTCATGATGTATTTAGACCGATTAGGTGTTATTACGATAAACAATGTAATTAGAGCTGTTCGTTATGCGACTGACAGATCTTACGTCAGATATGTACTGGAAAATCATTCAATAAAATTTAAGCTTTATTAA |
Protein Sequence
|
MDSRTGELITAPQAENGVYIWEITNPLYFKIYHVEDMLYTTTRVYHVQIRFNHNLRKALDLHKAFLNFQVWTTSLTASGTTYLIRFRHLVMMYLDRLGVITINNVIRAVRYATDRSYVRYVLENHSIKFKLY |
NCBI Accession
|
YP_007438867.1
|
Location
|
1150-1539 |
Protein Name
|
transactivating protein |
Coding Region
|
ATGCAAAATTCATCTTCCTCGACTCCCCCCTGTATCAAAGTGCAACACAGAGCGGCGAAGAGGAGAGGAACTCGCCGTAGAAGAATTGATATACAGTGCGGGTGCACCGTCTACGTCCACATCAACTGCAGCAATCATGGATTCACGCACCGGGGAACTCATCACTGCGCCTCAGGCAGAGAATGGCGTCTATATCTGGGAGATAACAAATCCCCTGTATTTCAAGATATACCACGTAGAGGACATGTTGTACACGACGACCAGAGTGTACCACGTACAGATACGGTTCAACCACAACCTCAGGAAAGCATTGGATCTCCACAAGGCATTCCTGAACTTCCAAGTCTGGACGACATCTCTGACAGCTTCTGGAACGACTTATTTGATTAG |
Protein Sequence
|
MQNSSSSTPPCIKVQHRAAKRRGTRRRRIDIQCGCTVYVHINCSNHGFTHRGTHHCASGREWRLYLGDNKSPVFQDIPRRGHVVHDDQSVPRTDTVQPQPQESIGSPQGIPELPSLDDISDSFWNDLFD |
NCBI Accession
|
YP_007438868.1
|
Location
|
1460-2539 |
Protein Name
|
replication-associated protein |
Coding Region
|
ATGCCACGGAAGGGTTCTTTCTGTATAAAAGCCAAAAACTATTTCATAACATATCCCCGGTGTTCGTTAACCAAAGAAGAAACACTTTCCCAATTTCTTGACATTCAAACACCGGTCAACAAGAAATTCATCAAAATATGCAGAGAGCTTCATGAAAATGGGGAGCCTCATCTCCACGTCCTTCTCCAGTTCGAAGGGAAATTCCAGTGCACGAATAATAGATTGTTCGACCTGGTATCCCCAACAAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAAGACGGAGATACAATTGAATGGGGACAGTTCCAGGTCGACGGAAGAAGTGCTAGAGGAGGCCAACAGACAGCTAATGATGCTGCAGCTGAGGCGTTAAATGCTCCGGATAAACAGACGGCTCTGCAAATAATTAGGGAGAAATTGCCGGAAAAATTTCTTTTTCAATTTCACAATTTAAATTCTAATTTAAATAGAATTTTCACAAAGGCTCCGGAGCCGTGGGTTCCTCCGTTTCCCCTATCCTCCTTCACTAACGTTCCCGACGAGATGCAAGAGTGGGCGGATGAGTATTTTGGAAGGGGTTCCGCTGCGCGGCCATTGAGACCTATGAGTTTGATAGTCGAAGGTGATAGTCGAACAGGGAAGACGATGTGGGCTCGTGCGTTAGGCCCACATAATTACTTGAGTGGTCATCTCGACTTCAATTCTAGGGTTTACTCGAACGAAGTGGAATACAACGTCATTGATGACGTCAACCCGCAATATCTAAAGTTAAAGCACTGGAAGGAGTTGATTGGTGCTCAAAAAGACTGGCAGTCAAATTGCAAGTACGGAAAAGCCAGTTCAAAATTAAAGGTGGGATACCATCAATCGTGCTCTGCAATCCAGGGGGAGGGAGTCAGTTATAAAGAGTACCTAGACAAAGAGGAGAATGCAGCATTAAAGTCGTGGACACTCCACAATGCAAAATTCATCTTCCTCGACTCCCCCCTGTATCAAAGTGCAACACAGAGCGGCGAAGAGGAGAGGAACTCGCCGTAG |
Protein Sequence
|
MPRKGSFCIKAKNYFITYPRCSLTKEETLSQFLDIQTPVNKKFIKICRELHENGEPHLHVLLQFEGKFQCTNNRLFDLVSPTRSAHFHPNIQGAKSSSDVKSYIDKDGDTIEWGQFQVDGRSARGGQQTANDAAAEALNAPDKQTALQIIREKLPEKFLFQFHNLNSNLNRIFTKAPEPWVPPFPLSSFTNVPDEMQEWADEYFGRGSAARPLRPMSLIVEGDSRTGKTMWARALGPHNYLSGHLDFNSRVYSNEVEYNVIDDVNPQYLKLKHWKELIGAQKDWQSNCKYGKASSKLKVGYHQSCSAIQGEGVSYKEYLDKEENAALKSWTLHNAKFIFLDSPLYQSATQSGEEERNSP |
NCBI Accession
|
YP_007438869.1
|
Location
|
2125-2382 |
Protein Name
|
AC4 protein |
Coding Region
|
ATGGGGAGCCTCATCTCCACGTCCTTCTCCAGTTCGAAGGGAAATTCCAGTGCACGAATAATAGATTGTTCGACCTGGTATCCCCAACAAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAAGACGGAGATACAATTGAATGGGGACAGTTCCAGGTCGACGGAAGAAGTGCTAGAGGAGGCCAACAGACAGCTAATGATGCTGCAGCTGAGGCGTTAA |
Protein Sequence
|
MGSLISTSFSSSKGNSSARIIDCSTWYPQQGQHISIRTFRELNPAPTSSPTSTKTEIQLNGDSSRSTEEVLEEANRQLMMLQLRR |