Sida yellow mosaic virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_000864865.1
Release date 2015/2/13
Submitter Fontes,E.P.B., Fernandes,A.V., Mariano,A.C., Galvao,R.M., Zerbini,F.M.
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_004639
ACCGGATGGCCGGCGCGATTTTCCCCCCCCTCACGTGGCGCTCTGGTGGCCGCTCGATCTCTCTCTCCCCCGCTCCCGAGGAGCCCCCCCTGCTCGCGCGATGTTCTCCTTTAATTCAAATTAAAGGATTTAACTTTTGTCTGACCAATTATAGTGCGCCTGAGGAGCTTAGATAACTGTGTTAATACTTGGTCCCTAAGTTTTATGGCCCCTATAAAACTAAAGCAAGCATGACGTCAGTCTTTAATTCGAAATGCCTAAGCGGGATCCCTCATGGCGCCAGATGGCGGGAACCTCAAAGGTAAGCCGCTCTTCCAATTTCTCTCCTCGTGGAGGTGGAGGCCCAAAACCCACTAGGGCCTTTGAATGGGTTAACAGGCCCATGTACAGGAAGCCCAGGATATATCGGACGATCAGAACGCCTGATGTTCCTAGAGGCTGTGAAGGGCCCTGTAAGGTCCAGTCCTACGAGCAACGTCACGATATTTCCCATGTTGGGAAGGTGATGTGTATATCTGATGTGACACGCGGTAACGGTATTACTCACCGTGTCGGTAAGCGTTTCTGTGTTAAGTCTGTGTTATATTTTAGGCAAGATATGGATGGACGAAAATATCAAGCTCAAGAACACACGAACAGTTGCATGTTCTGGTTGGTCCGGGACCGTAGACCGTATGGCACACCAATGGATTTCGGCCAGGTGTTCAACATGTTTGACAACGAGCCCAGTACTGCAACCGTGAAGAACGATCTTCGTGATCGTTTCCAGGTCATGCACAAGTTCTATGCCAAGGTCACGGGTGGACAGTATGCCAGCAATGAGCAGGCGCTGGTCAAGCGGTTTTGGAAGGTCAACAATCATGTGGTCTACAATCACCAGGAAGCTGGCAAGTACGAGAATCACACGGAGAACGCATTGCTACTTTATATGGCATGTACCCATGCCTCTAACCCTGTGTATGCAACGCTCAAGATTCGAATCTATTTCTACGATTCGATCACGAATTAATAAATTTTGAATTTTATTTCATGATTTTCCAGTACATATCTGACATATGATCTGTCAGTTGCAAAATAAACAGCTCTAAGTACATTATTAAGCGTAATAACGCCTAATTGGTCTAAATACATCATGACTAACTGTCTAAACCTAATCAAATAAGTCGTTCCAGAAGCTGTCAGAGATGTCGTCCAGACTTGGAAGTTCAGGAATGCCTTGTGGAGACCCAATGCTCTCCTGAGGTTGTGGTTGAACCGTATCTGTACGTGGTACACTCTGGTCGTCGTGTACAACAGGTCCTCTACGTGGTATATCTTGAAATACAGGGGATTTGTTATCTCCCCAGATATAGACGCCATTCTCTGCTTGAGGCACAGTGATGAGTTCCCTCGGTGCGTGAATCCCATCGTTGCTGCAGTTGATGTGGACGTATATGGAGCACCCGCACGCTAGATCAATCCTTCTACGGCGAGTTCCTCTCCTCTTCGCCGCTCTGTGTCGTGGTTTGATAGAGGGGGGAGTCGAGGAAGATGAATTTAGCATTGTGGAGTGTCCACGACTTTAGACCTGCATTCTCCTCTTTGTCGAGGAACTCTTTATAACTGACTCCCTCCCCAGGATTGCAGAGCACGATTGATGGGATTCCACCTTTAATTTGAACTGGCTTTCCGTACTTACAATTTGACTGCCAGTCTTTTTGAGCACCAATCAGCTCCTTCCAGTGCTTTAACTTTAGATATTGCGGAGTGACATCATCAATGACGTTATAATCCACTTCGTTTGAGTAAACCCTATTATTGAAGTCCAGATGTCCACTTAAGTAATTATGTGGGCTAATGCACGAGCCCACATCGTCTTTCCCTGTCCTTGAATCACCTTCCACTATCAAACTCATAGGTCTCAATGGCCGCGCAGCGGAACCCCTCCCAAAATAATCATCCGCCCACTCTTGCATCTCGTCGGGAACGTTAGTGAAGGAGGAGAGTGGAAACGGAGGAACCCACGGCTCCGGAGCCTTTTTGAATAACTTCTGGACATGCGTTTGTACTTTATCCAGATGTAAGACGTAATCCCTCGGTTGCTCTTCTTTCAAAATCTGCAATGCTTGTTCCGCAGATTGAGCATTTAGAACTTTCGCATACGTATCGTTGGCAGTTTGGCAACCTCCTCTAGCTGATCGTGGATCGATTTGGAAAACTCCAAAATCAATGAAGTCTCCGTCTTTCTCCACGTATTTTTTAACGTCTGACGAGCTCTTAGCTCCCTGAATGTTCGGATGGAAATGTGTTGACCTGGAAGGGGAGACGAGGTCGAAGAACCTGTTGTTCTTGCAATTGTACTTCCCTTCGAACTGGATAAGCACGTGGAGGTGAGGGCTCCCATCTTCGTGCAATTCCCTTGAAACACGGATGAATTTCTTACTGGTAGGGGTGTTCAACTCTTTCAATTGGGAAAGTGCTTCCTCTTTGGTCAAGGAGCACTTGGGATATGTAAGAAAATAGTTTTTGGAATTTATTCTAAAGGCCCTTGGAGAAGGCATATTTGCAGAAATGAACTGGGGTCTCGGCAACTCTGTGATATGAACTGGGGACTGGGGTCTTATTTATAGCAGACTCCATATAATTTTTGATGGACACGTGGCGGCCATCCGCTATAATATT

Gene Information

NCBI Accession NP_808761.1
Location 254-1009
Gene Name AV1
Protein Name coat protein CP
Coding Region ATGCCTAAGCGGGATCCCTCATGGCGCCAGATGGCGGGAACCTCAAAGGTAAGCCGCTCTTCCAATTTCTCTCCTCGTGGAGGTGGAGGCCCAAAACCCACTAGGGCCTTTGAATGGGTTAACAGGCCCATGTACAGGAAGCCCAGGATATATCGGACGATCAGAACGCCTGATGTTCCTAGAGGCTGTGAAGGGCCCTGTAAGGTCCAGTCCTACGAGCAACGTCACGATATTTCCCATGTTGGGAAGGTGATGTGTATATCTGATGTGACACGCGGTAACGGTATTACTCACCGTGTCGGTAAGCGTTTCTGTGTTAAGTCTGTGTTATATTTTAGGCAAGATATGGATGGACGAAAATATCAAGCTCAAGAACACACGAACAGTTGCATGTTCTGGTTGGTCCGGGACCGTAGACCGTATGGCACACCAATGGATTTCGGCCAGGTGTTCAACATGTTTGACAACGAGCCCAGTACTGCAACCGTGAAGAACGATCTTCGTGATCGTTTCCAGGTCATGCACAAGTTCTATGCCAAGGTCACGGGTGGACAGTATGCCAGCAATGAGCAGGCGCTGGTCAAGCGGTTTTGGAAGGTCAACAATCATGTGGTCTACAATCACCAGGAAGCTGGCAAGTACGAGAATCACACGGAGAACGCATTGCTACTTTATATGGCATGTACCCATGCCTCTAACCCTGTGTATGCAACGCTCAAGATTCGAATCTATTTCTACGATTCGATCACGAATTAA
Protein Sequence MPKRDPSWRQMAGTSKVSRSSNFSPRGGGGPKPTRAFEWVNRPMYRKPRIYRTIRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRFCVKSVLYFRQDMDGRKYQAQEHTNSCMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRFQVMHKFYAKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSITN

NCBI Accession NP_808762.1
Location 581-862
Gene Name AC5
Protein Name AC5 protein
Coding Region ATGATTGTTGACCTTCCAAAACCGCTTGACCAGCGCCTGCTCATTGCTGGCATACTGTCCACCCGTGACCTTGGCATAGAACTTGTGCATGACCTGGAAACGATCACGAAGATCGTTCTTCACGGTTGCAGTACTGGGCTCGTTGTCAAACATGTTGAACACCTGGCCGAAATCCATTGGTGTGCCATACGGTCTACGGTCCCGGACCAACCAGAACATGCAACTGTTCGTGTGTTCTTGAGCTTGATATTTTCGTCCATCCATATCTTGCCTAAAATATAA
Protein Sequence MIVDLPKPLDQRLLIAGILSTRDLGIELVHDLETITKIVLHGCSTGLVVKHVEHLAEIHWCAIRSTVPDQPEHATVRVFLSLIFSSIHILPKI

NCBI Accession NP_808763.1
Location 1006-1407
Gene Name AC3
Protein Name replication enhancer protein Ren
Coding Region ATGGGATTCACGCACCGAGGGAACTCATCACTGTGCCTCAAGCAGAGAATGGCGTCTATATCTGGGGAGATAACAAATCCCCTGTATTTCAAGATATACCACGTAGAGGACCTGTTGTACACGACGACCAGAGTGTACCACGTACAGATACGGTTCAACCACAACCTCAGGAGAGCATTGGGTCTCCACAAGGCATTCCTGAACTTCCAAGTCTGGACGACATCTCTGACAGCTTCTGGAACGACTTATTTGATTAGGTTTAGACAGTTAGTCATGATGTATTTAGACCAATTAGGCGTTATTACGCTTAATAATGTACTTAGAGCTGTTTATTTTGCAACTGACAGATCATATGTCAGATATGTACTGGAAAATCATGAAATAAAATTCAAAATTTATTAA
Protein Sequence MGFTHRGNSSLCLKQRMASISGEITNPLYFKIYHVEDLLYTTTRVYHVQIRFNHNLRRALGLHKAFLNFQVWTTSLTASGTTYLIRFRQLVMMYLDQLGVITLNNVLRAVYFATDRSYVRYVLENHEIKFKIY

NCBI Accession NP_808764.1
Location 1151-1543
Gene Name AC2
Protein Name transactivator protein Trap
Coding Region ATGCTAAATTCATCTTCCTCGACTCCCCCCTCTATCAAACCACGACACAGAGCGGCGAAGAGGAGAGGAACTCGCCGTAGAAGGATTGATCTAGCGTGCGGGTGCTCCATATACGTCCACATCAACTGCAGCAACGATGGGATTCACGCACCGAGGGAACTCATCACTGTGCCTCAAGCAGAGAATGGCGTCTATATCTGGGGAGATAACAAATCCCCTGTATTTCAAGATATACCACGTAGAGGACCTGTTGTACACGACGACCAGAGTGTACCACGTACAGATACGGTTCAACCACAACCTCAGGAGAGCATTGGGTCTCCACAAGGCATTCCTGAACTTCCAAGTCTGGACGACATCTCTGACAGCTTCTGGAACGACTTATTTGATTAG
Protein Sequence MLNSSSSTPPSIKPRHRAAKRRGTRRRRIDLACGCSIYVHINCSNDGIHAPRELITVPQAENGVYIWGDNKSPVFQDIPRRGPVVHDDQSVPRTDTVQPQPQESIGSPQGIPELPSLDDISDSFWNDLFD

NCBI Accession NP_808765.1
Location 1464-2540
Gene Name AC1
Protein Name replication associated protein Rep
Coding Region ATGCCTTCTCCAAGGGCCTTTAGAATAAATTCCAAAAACTATTTTCTTACATATCCCAAGTGCTCCTTGACCAAAGAGGAAGCACTTTCCCAATTGAAAGAGTTGAACACCCCTACCAGTAAGAAATTCATCCGTGTTTCAAGGGAATTGCACGAAGATGGGAGCCCTCACCTCCACGTGCTTATCCAGTTCGAAGGGAAGTACAATTGCAAGAACAACAGGTTCTTCGACCTCGTCTCCCCTTCCAGGTCAACACATTTCCATCCGAACATTCAGGGAGCTAAGAGCTCGTCAGACGTTAAAAAATACGTGGAGAAAGACGGAGACTTCATTGATTTTGGAGTTTTCCAAATCGATCCACGATCAGCTAGAGGAGGTTGCCAAACTGCCAACGATACGTATGCGAAAGTTCTAAATGCTCAATCTGCGGAACAAGCATTGCAGATTTTGAAAGAAGAGCAACCGAGGGATTACGTCTTACATCTGGATAAAGTACAAACGCATGTCCAGAAGTTATTCAAAAAGGCTCCGGAGCCGTGGGTTCCTCCGTTTCCACTCTCCTCCTTCACTAACGTTCCCGACGAGATGCAAGAGTGGGCGGATGATTATTTTGGGAGGGGTTCCGCTGCGCGGCCATTGAGACCTATGAGTTTGATAGTGGAAGGTGATTCAAGGACAGGGAAAGACGATGTGGGCTCGTGCATTAGCCCACATAATTACTTAAGTGGACATCTGGACTTCAATAATAGGGTTTACTCAAACGAAGTGGATTATAACGTCATTGATGATGTCACTCCGCAATATCTAAAGTTAAAGCACTGGAAGGAGCTGATTGGTGCTCAAAAAGACTGGCAGTCAAATTGTAAGTACGGAAAGCCAGTTCAAATTAAAGGTGGAATCCCATCAATCGTGCTCTGCAATCCTGGGGAGGGAGTCAGTTATAAAGAGTTCCTCGACAAAGAGGAGAATGCAGGTCTAAAGTCGTGGACACTCCACAATGCTAAATTCATCTTCCTCGACTCCCCCCTCTATCAAACCACGACACAGAGCGGCGAAGAGGAGAGGAACTCGCCGTAG
Protein Sequence MPSPRAFRINSKNYFLTYPKCSLTKEEALSQLKELNTPTSKKFIRVSRELHEDGSPHLHVLIQFEGKYNCKNNRFFDLVSPSRSTHFHPNIQGAKSSSDVKKYVEKDGDFIDFGVFQIDPRSARGGCQTANDTYAKVLNAQSAEQALQILKEEQPRDYVLHLDKVQTHVQKLFKKAPEPWVPPFPLSSFTNVPDEMQEWADDYFGRGSAARPLRPMSLIVEGDSRTGKDDVGSCISPHNYLSGHLDFNNRVYSNEVDYNVIDDVTPQYLKLKHWKELIGAQKDWQSNCKYGKPVQIKGGIPSIVLCNPGEGVSYKEFLDKEENAGLKSWTLHNAKFIFLDSPLYQTTTQSGEEERNSP

NCBI Accession NP_808766.1
Location 2126-2383
Gene Name AC4
Protein Name AC4 protein
Coding Region ATGGGAGCCCTCACCTCCACGTGCTTATCCAGTTCGAAGGGAAGTACAATTGCAAGAACAACAGGTTCTTCGACCTCGTCTCCCCTTCCAGGTCAACACATTTCCATCCGAACATTCAGGGAGCTAAGAGCTCGTCAGACGTTAAAAAATACGTGGAGAAAGACGGAGACTTCATTGATTTTGGAGTTTTCCAAATCGATCCACGATCAGCTAGAGGAGGTTGCCAAACTGCCAACGATACGTATGCGAAAGTTCTAA
Protein Sequence MGALTSTCLSSSKGSTIARTTGSSTSSPLPGQHISIRTFRELRARQTLKNTWRKTETSLILEFSKSIHDQLEEVAKLPTIRMRKF