Sida yellow leaf curl virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_002823465.1
Isolate Brazil
Release date 2018/8/25
Submitter Castillo-Urquiza,G.P., Beserra,J.E. Jr., Bruckner,F.P., Lima,A.T., Varsani,A., Alfenas-Zerbini,P., Murilo Zerbini,F., Beserra,J.E.A. Jr., Lima,A.T.M., Zerbini,P.A., Zerbini,F.M.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_038461
ACTGGATGGCCGCGCGATTTTTGGTGTCCCCCCCTACGTGGCGCTCTGGTGGCCGCTCAAATCCCCTCCCCCCCTGGTGTGGAGTCCCCCTTTGCCGCGCGCTTTCCTCCTTTAATTTGAATTAAAGGATTTAACCTTTGTCGGTCCAATTATAATGCGCCTGAGGAGCTTAGATATTTGTGTAAGACTTCGTTACTAAGTTTTATGAACCCTATAAAACTAAAGCAAGCATGACGTCAGTATGTAATTCGGAATGCCTAAGCGGGATCCCTCATGGCGCCAGGTGGCGGGAACCTCAAAGGTAAGCCGCACTTCCAATTTCTCACCTCGTGGAGGTGGAGGCCCAAAATTCAATAAGGCCTCTGAATGGGTCAACAGGCCTATGTATAGGAAGCCCAGGATATATCGAACGCTGAGAACGCCGGATGTTCCTAGAGGCTGTGAAGGGCCCTGTAAGGTCCAATCCTATGAGCAACGTCACGATATCTCCCATGTGGGGAAGGTGCTGTGCATATCTGATGTGACACGTGGAAACGGTATTACTCACCGTGTCGGTAAGCGTTTCTGTGTTAAGTCTGTGTATATTTTAGGGAAGATATGGATGGACGAGAATATCAAGCTCAAGAACCACACGAACAGTGTCATGTTCTGGTTGGTCAGGGACCGTAGACCGTATGGGACCCCGATGGACTTTGGCCAGGTGTTCAACATGTTCGATAACGAGCCCAGCACGGCAACCGTGAAGAACGATCTGCGTGATCGTTTCCAGGTGATGCACAAGTTCTATGCCAAGGTCACGGGTGGACAGTATGCCAGCAATGAGCAGGCGCTGGTCAAGCGCTTCTGGAAGGTCAACAATCATGTGGTGTACAATCATCAGGAAGCTGGGAAGTATGAGAATCACACGGAGAACGCTTTATTATTGTATATGGCATGTACTCATGCCTCTAACCCTGTGTATGCAACGCTTAAGATTCGAATCTATTTCTACGATTCGATCACGAATTAATAAAGCTTGAATTTTATTGAATGATTTTCCAGTACATATCTGACATATGATCTGTCAGTTGCGAAACGAACAGCTCTAATTACATTATTAACCGTAATTACTCCTAATATATCTAAATACAACATGACTAACTGTCTAAACCTAATCAAATAAGTCGTTCCAGAAGCTGTCAGGGAAGTCGTCCAGACTTGGAAGTTGAGATATGCCTTGTGGAGATCCAATGCTCTCCTGAGGTTGTGATTGAACCGGATCTGGATGTGGTACACTCTGGTCGTCGTGTACAGGAAGTCCTCTACGTGGTATATCTTGAAATACAGGGGATTTGTTATCTCCCAGGTATAGACGCCATTCTCTGCTTGAGGCACAGTGATGAGTTCCCCTGTGCGTGAATCCATGGTTGCTGCAACTGATGTGGACGTATATGGTGCACCCGCACTCGAGATCAATCCTTCTACGGCGAGTTCCTCTCTTCTTCGCCGCTCTGTGTTGAGGTTTGATACAGGGGGGAGTCGAGGAAGATGAATTTAGCATTGTGGAGTGTCCACGATTTTAGGGCTGCATTTTCCTCTTTGTCGAGGTAATCTTTATAACTGACTCCCTCCCCAGGATTGCAGAGCACGATTGATGGGATACCCCCTTTAATTTGAACAGGCTTGCCGTACTTGCAATTTGACTGCCAATCCTTTTGGGCCCCAATCAATTCCTTCCAGTGCTTTAGCTTTAGGTATTGCGGATTGACGTCATCAATGACGTTATATTCCACTTCATTTGAATAAACTTTGGAATTGAAGTCCAGATGGCCGCTCAGGTAATTATGTGGGCCTAATGCACGAGCCCACATCGTCTTACCAGTCCTTGACCCACCTTCTACTATCAAACTAACTGGCCTCAATGGCCGCGCAGCGGAACCTCTCCCAAAATACTCATCGGCCCACTCTTGCATCTCGTCTGGCACGTTAGTGAATGAGGAGAGGGGAAATGGAGGGACCCATGGCTCCGGAGACTTCATGAATATTCTGTCCAGGTTAGCCTTGACATTGTGATAGTTTACGAGGAAAGTCTTGGGGTCTCCGGCTTTGATAATGTCAAGAGCCTCTCCCGGAGTAGCTGCATTGACGGCGTTATGGTATACGTCGTCTTTATTCCCCTTTGTTCCCCCAGACACCTTGTACTGTCCGGATTCACAATAATCACCCTCTTTGGTGATGTAATTCTTGACGGCGTTGGTGTCTTTGGCTGCCTGAATATTGGGGTGAAATCCGGCAGACCGTCTGGGGTGAGTGAGGTCGAAAAATCTAACATCCTTGATGTTGGACTTGCCGGAGAGTTGGACAAGACAGTGAAGATGAGGGAAGCCGTCGGAGTGCTCCTCTCTGGCGACTCGTATGTATGTGGGTTTAACGACTGACCATGGAAGGGATTGAAGCATCTGAAGAGCTTCATCTTTGGGTATATCGCACTGGGGATATGTTAGGAATATGTTTTTGGCAGCTAGTCTGAACTTCTGAGGATTTCGTGGCATATTTGTAAATATTGATGAGGACACCAGGGATGGCTCTCAACTTCTGTGATATTTTCTGGTGTCCTGGTGTCCAATTTATACTAGAAAGCTCTAGGTTAGTACCAGGGGCAAAAGCGGCCATCCATATAATATT

Gene Information

NCBI Accession YP_009506481.1
Location 254-1009
Gene Name CP
Protein Name coat protein
Coding Region ATGCCTAAGCGGGATCCCTCATGGCGCCAGGTGGCGGGAACCTCAAAGGTAAGCCGCACTTCCAATTTCTCACCTCGTGGAGGTGGAGGCCCAAAATTCAATAAGGCCTCTGAATGGGTCAACAGGCCTATGTATAGGAAGCCCAGGATATATCGAACGCTGAGAACGCCGGATGTTCCTAGAGGCTGTGAAGGGCCCTGTAAGGTCCAATCCTATGAGCAACGTCACGATATCTCCCATGTGGGGAAGGTGCTGTGCATATCTGATGTGACACGTGGAAACGGTATTACTCACCGTGTCGGTAAGCGTTTCTGTGTTAAGTCTGTGTATATTTTAGGGAAGATATGGATGGACGAGAATATCAAGCTCAAGAACCACACGAACAGTGTCATGTTCTGGTTGGTCAGGGACCGTAGACCGTATGGGACCCCGATGGACTTTGGCCAGGTGTTCAACATGTTCGATAACGAGCCCAGCACGGCAACCGTGAAGAACGATCTGCGTGATCGTTTCCAGGTGATGCACAAGTTCTATGCCAAGGTCACGGGTGGACAGTATGCCAGCAATGAGCAGGCGCTGGTCAAGCGCTTCTGGAAGGTCAACAATCATGTGGTGTACAATCATCAGGAAGCTGGGAAGTATGAGAATCACACGGAGAACGCTTTATTATTGTATATGGCATGTACTCATGCCTCTAACCCTGTGTATGCAACGCTTAAGATTCGAATCTATTTCTACGATTCGATCACGAATTAA
Protein Sequence MPKRDPSWRQVAGTSKVSRTSNFSPRGGGGPKFNKASEWVNRPMYRKPRIYRTLRTPDVPRGCEGPCKVQSYEQRHDISHVGKVLCISDVTRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRFQVMHKFYAKVTGGQYASNEQALVKRFWKVNNHVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSITN

NCBI Accession YP_009506482.1
Location 1006-1404
Gene Name Ren
Protein Name replication enhancer protein
Coding Region ATGGATTCACGCACAGGGGAACTCATCACTGTGCCTCAAGCAGAGAATGGCGTCTATACCTGGGAGATAACAAATCCCCTGTATTTCAAGATATACCACGTAGAGGACTTCCTGTACACGACGACCAGAGTGTACCACATCCAGATCCGGTTCAATCACAACCTCAGGAGAGCATTGGATCTCCACAAGGCATATCTCAACTTCCAAGTCTGGACGACTTCCCTGACAGCTTCTGGAACGACTTATTTGATTAGGTTTAGACAGTTAGTCATGTTGTATTTAGATATATTAGGAGTAATTACGGTTAATAATGTAATTAGAGCTGTTCGTTTCGCAACTGACAGATCATATGTCAGATATGTACTGGAAAATCATTCAATAAAATTCAAGCTTTATTAA
Protein Sequence MDSRTGELITVPQAENGVYTWEITNPLYFKIYHVEDFLYTTTRVYHIQIRFNHNLRRALDLHKAYLNFQVWTTSLTASGTTYLIRFRQLVMLYLDILGVITVNNVIRAVRFATDRSYVRYVLENHSIKFKLY

NCBI Accession YP_009506483.1
Location 1151-1540
Gene Name Trap
Protein Name trans-activating protein
Coding Region ATGCTAAATTCATCTTCCTCGACTCCCCCCTGTATCAAACCTCAACACAGAGCGGCGAAGAAGAGAGGAACTCGCCGTAGAAGGATTGATCTCGAGTGCGGGTGCACCATATACGTCCACATCAGTTGCAGCAACCATGGATTCACGCACAGGGGAACTCATCACTGTGCCTCAAGCAGAGAATGGCGTCTATACCTGGGAGATAACAAATCCCCTGTATTTCAAGATATACCACGTAGAGGACTTCCTGTACACGACGACCAGAGTGTACCACATCCAGATCCGGTTCAATCACAACCTCAGGAGAGCATTGGATCTCCACAAGGCATATCTCAACTTCCAAGTCTGGACGACTTCCCTGACAGCTTCTGGAACGACTTATTTGATTAG
Protein Sequence MLNSSSSTPPCIKPQHRAAKKRGTRRRRIDLECGCTIYVHISCSNHGFTHRGTHHCASSREWRLYLGDNKSPVFQDIPRRGLPVHDDQSVPHPDPVQSQPQESIGSPQGISQLPSLDDFPDSFWNDLFD

NCBI Accession YP_009506484.1
Location 1461-2531
Gene Name Rep
Protein Name replication-associated protein
Coding Region ATGCCACGAAATCCTCAGAAGTTCAGACTAGCTGCCAAAAACATATTCCTAACATATCCCCAGTGCGATATACCCAAAGATGAAGCTCTTCAGATGCTTCAATCCCTTCCATGGTCAGTCGTTAAACCCACATACATACGAGTCGCCAGAGAGGAGCACTCCGACGGCTTCCCTCATCTTCACTGTCTTGTCCAACTCTCCGGCAAGTCCAACATCAAGGATGTTAGATTTTTCGACCTCACTCACCCCAGACGGTCTGCCGGATTTCACCCCAATATTCAGGCAGCCAAAGACACCAACGCCGTCAAGAATTACATCACCAAAGAGGGTGATTATTGTGAATCCGGACAGTACAAGGTGTCTGGGGGAACAAAGGGGAATAAAGACGACGTATACCATAACGCCGTCAATGCAGCTACTCCGGGAGAGGCTCTTGACATTATCAAAGCCGGAGACCCCAAGACTTTCCTCGTAAACTATCACAATGTCAAGGCTAACCTGGACAGAATATTCATGAAGTCTCCGGAGCCATGGGTCCCTCCATTTCCCCTCTCCTCATTCACTAACGTGCCAGACGAGATGCAAGAGTGGGCCGATGAGTATTTTGGGAGAGGTTCCGCTGCGCGGCCATTGAGGCCAGTTAGTTTGATAGTAGAAGGTGGGTCAAGGACTGGTAAGACGATGTGGGCTCGTGCATTAGGCCCACATAATTACCTGAGCGGCCATCTGGACTTCAATTCCAAAGTTTATTCAAATGAAGTGGAATATAACGTCATTGATGACGTCAATCCGCAATACCTAAAGCTAAAGCACTGGAAGGAATTGATTGGGGCCCAAAAGGATTGGCAGTCAAATTGCAAGTACGGCAAGCCTGTTCAAATTAAAGGGGGTATCCCATCAATCGTGCTCTGCAATCCTGGGGAGGGAGTCAGTTATAAAGATTACCTCGACAAAGAGGAAAATGCAGCCCTAAAATCGTGGACACTCCACAATGCTAAATTCATCTTCCTCGACTCCCCCCTGTATCAAACCTCAACACAGAGCGGCGAAGAAGAGAGGAACTCGCCGTAG
Protein Sequence MPRNPQKFRLAAKNIFLTYPQCDIPKDEALQMLQSLPWSVVKPTYIRVAREEHSDGFPHLHCLVQLSGKSNIKDVRFFDLTHPRRSAGFHPNIQAAKDTNAVKNYITKEGDYCESGQYKVSGGTKGNKDDVYHNAVNAATPGEALDIIKAGDPKTFLVNYHNVKANLDRIFMKSPEPWVPPFPLSSFTNVPDEMQEWADEYFGRGSAARPLRPVSLIVEGGSRTGKTMWARALGPHNYLSGHLDFNSKVYSNEVEYNVIDDVNPQYLKLKHWKELIGAQKDWQSNCKYGKPVQIKGGIPSIVLCNPGEGVSYKDYLDKEENAALKSWTLHNAKFIFLDSPLYQTSTQSGEEERNSP

NCBI Accession YP_009506485.1
Location 2057-2452
Gene Name AC4
Protein Name AC4
Coding Region ATGAAGCTCTTCAGATGCTTCAATCCCTTCCATGGTCAGTCGTTAAACCCACATACATACGAGTCGCCAGAGAGGAGCACTCCGACGGCTTCCCTCATCTTCACTGTCTTGTCCAACTCTCCGGCAAGTCCAACATCAAGGATGTTAGATTTTTCGACCTCACTCACCCCAGACGGTCTGCCGGATTTCACCCCAATATTCAGGCAGCCAAAGACACCAACGCCGTCAAGAATTACATCACCAAAGAGGGTGATTATTGTGAATCCGGACAGTACAAGGTGTCTGGGGGAACAAAGGGGAATAAAGACGACGTATACCATAACGCCGTCAATGCAGCTACTCCGGGAGAGGCTCTTGACATTATCAAAGCCGGAGACCCCAAGACTTTCCTCGTAA
Protein Sequence MKLFRCFNPFHGQSLNPHTYESPERSTPTASLIFTVLSNSPASPTSRMLDFSTSLTPDGLPDFTPIFRQPKTPTPSRITSPKRVIIVNPDSTRCLGEQRGIKTTYTITPSMQLLRERLLTLSKPETPRLSS