Sida yellow golden mosaic virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_018582795.1
Isolate Brazil
Release date 2021/6/1
Submitter Macedo,M., Moraes,C., Gilbertson,R., Inoue Nagata,A.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_055548
ACCGGATGGCCGCGCGATTTTTTCCCCCCCCTACGTGGCGCTCTGGTGCCCGTCGGATTCCCCTTTCTGGTGGACCCCTCCCCCCCTGGTGTCCGCGCGCACCTCAGCATTTAATTGAGTAAAAGCTTTAGCTTTTAATTCGTCCAATAAGATGGCCCCTGATCAGCCTAGATAATTGTGTTATCCTTGGGGCCGAAGTACCAGATGAACGGCTATAAATTAACGAAAGATTGATCTCAATCTTTAATTCAAAATGCCTAAGCGGGATGCCCCGTGGCGACTTATGGCTGGTACCTCAAAGGTAAGCCGTTCTTCCAATTCTGGGCCTCGTGGGAGTTCTGGGCCTAAATACAGCAAGTCAGCGGAATGGGTTAACAGGCCTATGTACAGAAAGCCCAGGATCTATCGAGCCTACAGAACTCCCGATGTCCCTCGAGGGTGCGAAGGACCTTGCAAGGTCCAGTCCTATGAACAGCGGCACGACATCTCACATGTCGGCAAGGTCATGTGTATATCTGACGTCACCCGAGGTAATGGCATTACTCATCGTGTTGGTAAGCGTTTTTGTGTTAAGTCTGTATATATTTTAGGCAAGATTTGGATGGACGAGAATATCAAGCTCAAGAACCACACAAACAGCGTTATGTTCTGGCTGGTCAGAGATCGTAGACCCTATGGCACACCTATGGACTTTGGCCAGGTGTTCAACATGTTCGACAACGAGCCTAGCACTGCAACTGTTAAGAACGATCTCCGTGACCGTTACCAGGTAATGCACAAGTTCTACGGCAAGGTGACAGGTGGCCAATATGCCAGCAATGAACAGGCGATAGTCAAACGCTTCTGGAAGGTCAACAATCATGTGGTGTACAACCACCAAGAAGCTGGCAAGTACGAGAATCATACGGAGAACGCATTACTACTGTACATGGCATGTACTCATGCCTCTAACCCTGTGTATGCAACGCTCAAGATTCGAATCTATTTTTACGATTCGATTATGAATTAATAAAATTTAAATTTTATTGAATGATTTTCCAGCACATGGCTCACATATTTTTTGTCCGTTGCGAAACGAACAGCTCTAATTACATTGTTAAGACAAATAACGCCTAATCTATCTAAATACAGCATAACTAAATCCTGGAACCTAGTCAAATAAGTCGTTCCAGAAGCTCTCAGAGAAGTCGTCCAGACTTGGAAGTTCAGGAATGCCTTGTGGAGACCCAGTGCTTTCCTGAGGTTGTGGTTGAACCGTATCTGCACGTGGTACACACGTGTCGTCGTGTACAGCATGTCCTCGACCCTGTATATCCTGAAATACAGGGGATTTGTTATCTCCCAGATATAGACGCCATTCTCTGCCTGACGTGCAGTGATGAGCTCCCCTGTGCGTGAATCCATGCCCGGTGCAAGCTATGTGGACGTAAATGGAGCAGCCGCAGTCCAAGTCAATTCGCCGCCTCCTGATGGCCCTCTTCTTGGTAATCCTGTGTTTCGCTTTGATAGAGGGGGGCGTCGAGGAAGAAGAATTTAGCATTTTTTAATGTCCAGGCTCTGAGTGATGAGTTTTCCTCTTTCTCGAGGAAATCTTTATAGCTGGCCCCCTCTCCAGGATTGCAGAGCACGATTGATGGGATACCGCCTTTAATTTGAACCGGCTTTCCATATTTACAATTTGACTGCCAGTCTTTTTGAGCACCCATCAATTCTTTCCAGTGCTTTAGCTTTAGATATTGCGGACTAACGTCATCAATGACGTTATACTCGACGTCATTTGAATACACCCTGGAATTGAAGTCCAGGTGTCCACTTAGATAGTTATGGGCCCCTAAAGCACGAGCCCACATCGTTTTCCCCGTTCTACTATCACCTTCAACAATTATACTAACAGGCCTGATGGGCCGCGCAGCGGAACCTCTCCCAAAATAATCATCAGCCCACTCTTGCAACTCATCTGGAACGTTAGTGAACGACGACAGGGGAAACGGAGGGACCCACGGTTCGGAAGGCTTTTTGAAGATCTTGTCCAGGTTGCTCGTCAAGTTGTGGTACTGGAACAGGAACTTTTCCGGCAACTTCTCTTTGATGATCTTCAAAGCCTCCTCCTTCGACGCTGCGTTCAACGCCTCGGCGGCTGCGTCGTTAGCTGTTTGCTGACCGCCTCTAGCACTTCGGCCGTCGATCTGGAACTGCCCCCATTCGACTGTGTCTCCATCCTTCTCGACATAGGACTTGACGTCGGAGCTGGATTTAGCTCCCTGTATGTTCGGATGGAAATGTGTTGACCTACTTGGGGAGACCAGGTCGAACAGTCTGCTATTTGTGCAGTTAAACTTCCCTTCGAACTGGATAAGCACGTGGAGATGTGGCTGCCCATCTTCGTGAAGCTCTCTGGCGATTTTAACGAACTTCTTGTTCGTCGGCGTCGGAATATTCCTAATTTGTTCTAGGGCTTCTTCTTTGGCCAGAGAGCATTGTGGATAAGTGAGGAAATAATTTTTGGCTTTAATAGAGAAAGAACCCTTCCGTGGCATTTTTGTAAATAAGGGTGTTCCCCCGATAGCTCTGGCTCTCAAAACTCTATACAATTGGGGGAACTGGGGGAACTTATATAGTAGAAGTTCCTAGGGGGCACGTGGCGGCCATCCGTTTAATATT

Gene Information

NCBI Accession YP_010087357.1
Location 254-1009
Gene Name CP
Protein Name coat protein
Coding Region ATGCCTAAGCGGGATGCCCCGTGGCGACTTATGGCTGGTACCTCAAAGGTAAGCCGTTCTTCCAATTCTGGGCCTCGTGGGAGTTCTGGGCCTAAATACAGCAAGTCAGCGGAATGGGTTAACAGGCCTATGTACAGAAAGCCCAGGATCTATCGAGCCTACAGAACTCCCGATGTCCCTCGAGGGTGCGAAGGACCTTGCAAGGTCCAGTCCTATGAACAGCGGCACGACATCTCACATGTCGGCAAGGTCATGTGTATATCTGACGTCACCCGAGGTAATGGCATTACTCATCGTGTTGGTAAGCGTTTTTGTGTTAAGTCTGTATATATTTTAGGCAAGATTTGGATGGACGAGAATATCAAGCTCAAGAACCACACAAACAGCGTTATGTTCTGGCTGGTCAGAGATCGTAGACCCTATGGCACACCTATGGACTTTGGCCAGGTGTTCAACATGTTCGACAACGAGCCTAGCACTGCAACTGTTAAGAACGATCTCCGTGACCGTTACCAGGTAATGCACAAGTTCTACGGCAAGGTGACAGGTGGCCAATATGCCAGCAATGAACAGGCGATAGTCAAACGCTTCTGGAAGGTCAACAATCATGTGGTGTACAACCACCAAGAAGCTGGCAAGTACGAGAATCATACGGAGAACGCATTACTACTGTACATGGCATGTACTCATGCCTCTAACCCTGTGTATGCAACGCTCAAGATTCGAATCTATTTTTACGATTCGATTATGAATTAA
Protein Sequence MPKRDAPWRLMAGTSKVSRSSNSGPRGSSGPKYSKSAEWVNRPMYRKPRIYRAYRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRYQVMHKFYGKVTGGQYASNEQAIVKRFWKVNNHVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSIMN

NCBI Accession YP_010087358.1
Location 587-904
Gene Name AC5
Protein Name AC5
Coding Region ATGATTCTCGTACTTGCCAGCTTCTTGGTGGTTGTACACCACATGATTGTTGACCTTCCAGAAGCGTTTGACTATCGCCTGTTCATTGCTGGCATATTGGCCACCTGTCACCTTGCCGTAGAACTTGTGCATTACCTGGTAACGGTCACGGAGATCGTTCTTAACAGTTGCAGTGCTAGGCTCGTTGTCGAACATGTTGAACACCTGGCCAAAGTCCATAGGTGTGCCATAGGGTCTACGATCTCTGACCAGCCAGAACATAACGCTGTTTGTGTGGTTCTTGAGCTTGATATTCTCGTCCATCCAAATCTTGCCTAA
Protein Sequence MILVLASFLVVVHHMIVDLPEAFDYRLFIAGILATCHLAVELVHYLVTVTEIVLNSCSARLVVEHVEHLAKVHRCAIGSTISDQPEHNAVCVVLELDILVHPNLA

NCBI Accession YP_010087359.1
Location 1006-1404
Gene Name REn
Protein Name replication enhancer protein
Coding Region ATGGATTCACGCACAGGGGAGCTCATCACTGCACGTCAGGCAGAGAATGGCGTCTATATCTGGGAGATAACAAATCCCCTGTATTTCAGGATATACAGGGTCGAGGACATGCTGTACACGACGACACGTGTGTACCACGTGCAGATACGGTTCAACCACAACCTCAGGAAAGCACTGGGTCTCCACAAGGCATTCCTGAACTTCCAAGTCTGGACGACTTCTCTGAGAGCTTCTGGAACGACTTATTTGACTAGGTTCCAGGATTTAGTTATGCTGTATTTAGATAGATTAGGCGTTATTTGTCTTAACAATGTAATTAGAGCTGTTCGTTTCGCAACGGACAAAAAATATGTGAGCCATGTGCTGGAAAATCATTCAATAAAATTTAAATTTTATTAA
Protein Sequence MDSRTGELITARQAENGVYIWEITNPLYFRIYRVEDMLYTTTRVYHVQIRFNHNLRKALGLHKAFLNFQVWTTSLRASGTTYLTRFQDLVMLYLDRLGVICLNNVIRAVRFATDKKYVSHVLENHSIKFKFY

NCBI Accession YP_010087360.1
Location 1151-1540
Gene Name TrAP
Protein Name trans-activating protein
Coding Region ATGCTAAATTCTTCTTCCTCGACGCCCCCCTCTATCAAAGCGAAACACAGGATTACCAAGAAGAGGGCCATCAGGAGGCGGCGAATTGACTTGGACTGCGGCTGCTCCATTTACGTCCACATAGCTTGCACCGGGCATGGATTCACGCACAGGGGAGCTCATCACTGCACGTCAGGCAGAGAATGGCGTCTATATCTGGGAGATAACAAATCCCCTGTATTTCAGGATATACAGGGTCGAGGACATGCTGTACACGACGACACGTGTGTACCACGTGCAGATACGGTTCAACCACAACCTCAGGAAAGCACTGGGTCTCCACAAGGCATTCCTGAACTTCCAAGTCTGGACGACTTCTCTGAGAGCTTCTGGAACGACTTATTTGACTAG
Protein Sequence MLNSSSSTPPSIKAKHRITKKRAIRRRRIDLDCGCSIYVHIACTGHGFTHRGAHHCTSGREWRLYLGDNKSPVFQDIQGRGHAVHDDTCVPRADTVQPQPQESTGSPQGIPELPSLDDFSESFWNDLFD

NCBI Accession YP_010087361.1
Location 1452-2537
Gene Name REP
Protein Name replication associated protein
Coding Region ATGCCACGGAAGGGTTCTTTCTCTATTAAAGCCAAAAATTATTTCCTCACTTATCCACAATGCTCTCTGGCCAAAGAAGAAGCCCTAGAACAAATTAGGAATATTCCGACGCCGACGAACAAGAAGTTCGTTAAAATCGCCAGAGAGCTTCACGAAGATGGGCAGCCACATCTCCACGTGCTTATCCAGTTCGAAGGGAAGTTTAACTGCACAAATAGCAGACTGTTCGACCTGGTCTCCCCAAGTAGGTCAACACATTTCCATCCGAACATACAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTATGTCGAGAAGGATGGAGACACAGTCGAATGGGGGCAGTTCCAGATCGACGGCCGAAGTGCTAGAGGCGGTCAGCAAACAGCTAACGACGCAGCCGCCGAGGCGTTGAACGCAGCGTCGAAGGAGGAGGCTTTGAAGATCATCAAAGAGAAGTTGCCGGAAAAGTTCCTGTTCCAGTACCACAACTTGACGAGCAACCTGGACAAGATCTTCAAAAAGCCTTCCGAACCGTGGGTCCCTCCGTTTCCCCTGTCGTCGTTCACTAACGTTCCAGATGAGTTGCAAGAGTGGGCTGATGATTATTTTGGGAGAGGTTCCGCTGCGCGGCCCATCAGGCCTGTTAGTATAATTGTTGAAGGTGATAGTAGAACGGGGAAAACGATGTGGGCTCGTGCTTTAGGGGCCCATAACTATCTAAGTGGACACCTGGACTTCAATTCCAGGGTGTATTCAAATGACGTCGAGTATAACGTCATTGATGACGTTAGTCCGCAATATCTAAAGCTAAAGCACTGGAAAGAATTGATGGGTGCTCAAAAAGACTGGCAGTCAAATTGTAAATATGGAAAGCCGGTTCAAATTAAAGGCGGTATCCCATCAATCGTGCTCTGCAATCCTGGAGAGGGGGCCAGCTATAAAGATTTCCTCGAGAAAGAGGAAAACTCATCACTCAGAGCCTGGACATTAAAAAATGCTAAATTCTTCTTCCTCGACGCCCCCCTCTATCAAAGCGAAACACAGGATTACCAAGAAGAGGGCCATCAGGAGGCGGCGAATTGA
Protein Sequence MPRKGSFSIKAKNYFLTYPQCSLAKEEALEQIRNIPTPTNKKFVKIARELHEDGQPHLHVLIQFEGKFNCTNSRLFDLVSPSRSTHFHPNIQGAKSSSDVKSYVEKDGDTVEWGQFQIDGRSARGGQQTANDAAAEALNAASKEEALKIIKEKLPEKFLFQYHNLTSNLDKIFKKPSEPWVPPFPLSSFTNVPDELQEWADDYFGRGSAARPIRPVSIIVEGDSRTGKTMWARALGAHNYLSGHLDFNSRVYSNDVEYNVIDDVSPQYLKLKHWKELMGAQKDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDFLEKEENSSLRAWTLKNAKFFFLDAPLYQSETQDYQEEGHQEAAN

NCBI Accession YP_010087362.1
Location 2123-2380
Gene Name AC4
Protein Name AC4
Coding Region ATGGGCAGCCACATCTCCACGTGCTTATCCAGTTCGAAGGGAAGTTTAACTGCACAAATAGCAGACTGTTCGACCTGGTCTCCCCAAGTAGGTCAACACATTTCCATCCGAACATACAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTATGTCGAGAAGGATGGAGACACAGTCGAATGGGGGCAGTTCCAGATCGACGGCCGAAGTGCTAGAGGCGGTCAGCAAACAGCTAACGACGCAGCCGCCGAGGCGTTGA
Protein Sequence MGSHISTCLSSSKGSLTAQIADCSTWSPQVGQHISIRTYRELNPAPTSSPMSRRMETQSNGGSSRSTAEVLEAVSKQLTTQPPRR