Sida leaf curl virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_000866845.1
Isolate China:Hainan
Release date 2015/2/13
Submitter Guo,X., Zhou,X.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_007638
ACCGGATAGCCGCGCGATTTTTTAAAGTGGTCCCCCCCACTAAATGTTGTCGACCAACCAGAAGGCGCGCTCAAAGCTTAATTGTTTTTTCCCTCCCTATATAATACTTCCCTCGTAAGTTTTGGGTTCAAATATGTGGGACCCTTTAGAGAACGAATTCCCTGAAACCGTTCACGGTTTCCGTTCTATGCTTGCGGTGAAGTATATGCAGGAGATTGCGAAGAGCTACGAACCTAGCACATTGGGTTTTGAATACGTCCGTGATCTTATCTCCGTTCTGAGGTGTAAGGATTATGTCCAAGCGTCCTGCAAGTATGGCGTATTCCTCTCCAATTTCTTCCGCGCGTCGAAGGCTGAACTTCGACAGTCCTCGCCCATCAGTTGCTGCTGCCCTTACTGCCCCAGGCATAAGGAGAAGAAGATGGACCAACAGGCCCATGAACAGAAAGCCCAGGTTCTACAGAATGTATCGAACCCCTGATGTTCCTAAGGGCTGTGAGGGCCCATGTAAGGTGCAATCGTTCGATGCCAAAGACGATATTGGGCACATGGGTAAGGTTATTTGTTTGTCTGATGTTACAAGAGGTATTGGGCTGACCCACCGAGTGGGTAAGCGTTTCTGTGTGAAATCATTGTATTTCGTAGGGAAAATATGGATGGACGAGAATATCAAGGTGAAAAACCACACGAACACCGTTATGTTTTGGATTGTTAGGGATCGGCGACCTACGGGAACTCCATTGGATTTCCAGCAGGTGTTTAATGTCTACGATAACGAGCCCGCCACTGCTACAGTCAAGAACGACAAACGTGATCGTTTCCAGGTTTTAAGGAGGTTCCATGCAACGGTGACCGGAGGGCAATATGCAGCTAAGGAGTCTGCTATTATTAGGAAGTTCTATCGTGTGAACAATTATGTTGTTTACAACCACCAGGAGGCCGGAAAATACGAGAACCATACTGAGAATGCTTTGCTCTTGTACATGGCATGTACGCATGCCTCTAATCCTGTGTATGCTACTTTGAAATGTAGGAGTTATTTCTACGATACTGTAACGAATTAAGATTAATAAAGGTTGAATTTTATTGACTCAGTTTGTTGCACCTGAATTGTGCCTTGAATTACATTGTATAATACATGATCAAAAGCCCTAATTACATTATTAATACTAATAACTCCTAATCTATCTAAGTACCCAAGAACTTGATTGCGTAAGACCCTCAAGAAACGCCATGTCTGAGGATGTAAACGAGTCCAGATCCGGAAGGTTATGAAACATTTGTGAATCCCCAAGGCTTTCCTCAGGTTGTGGTTGAACCTCACTTGGACGGTTATGATGTCGTGGTTGCGGAGGAACGGCCTGTCCAGGTGGTCTAGGATCTTGAAATACAGGGGATTTGCCATATCCCAGGTATATACGCCACTCGTCGCTTGAGCTGCAGTGATGTATTCCCCTGTGCGTGAATCCATGGTTGTGACAGTTGAGACTGCGGAAGTATGTGCACCCGCATTCAAGGTCCACCCTCTTCCTGCGATTGTACTTCTTCCTCACCTTCTGATGCTCGATTTTGATGGGCACCTGAGTACAATGGCTCTGTGAGGGTGACGAACGACGCATTTTTTAAAGCCCACGTCTTTAAAGCGGAATTCTTTTCCTCGTCCAGGTACTCTTTATAGCTGGAATTGGGCCCTGGATTGCAAAGGAAGATTGTTGGGATCCCGCCTTTAATTTGAACTGGCTTGCCGTACTTGGTATTGCTTTGCCAGTCCCTCTGGGCCCCCATAAACTCTTTAAAGTGTTTGAGAAAATGGGGATCAACGTCATCGATGACGTTGTACCATGCGTCGTTGCTGTACACCTTTGGGCTTAGGTCTAGATGCCCACACAAGTAATTATGTGGACCTAATGACCTGGCCCACATCGTCTTCCCTGTTCTACTGTCACCTTCTACCACTAAACTTAAGGGTCTCAGAGGCCGCGCAGCGGCCGCCACTACATTCTCGCACGCCCACTCTTCGAGTTCTTCCGGAACTCGATCAAAAGAAGAGACAGAAAAAGGAGAAACATAAACCTCCATTGGAGGTGTAAAAATCCTATCTAAGTTAGCATTTAAATTATGAAATTGTAAAACATAATCTTTAGGGGCTAGTTCCCTAAGTACTCTAAGAGCCTCCGGCTTACTGCCTGTGTTAAGTGCTGCGGCGTAAGCGTCGTTGGCTGTCTGTTGTCCCCCTCTGGCAGATCTTCCGTCGATCTGAAACTCTCCCCATTCGATGGTGTCGCCGTCCTTGTCGATGTAGGACTTGACATCTGAGCTTGATTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCGGTTTGGGGAGACCAGGTCGAAGAATCGCTGATTCTGGCACTTGTATTTCCCCTCGAACTGGATGAGCACGTGAATATGAGGTTCCCCATTCTCGTGGAGTTCTCTGCAGACCTTAATGTATTTTTTGTTGGTTGGGGTGTTTAGGTTTTGGATTTGGGAAAGTGTTTCCTCTTTAGTAAGAGAGCATTTGGGATAAGTAAGGAAATAATTTTTGCAATAAATGTTAAAGCGTTTAGAGGGAGCCATAATGGTCAATGATCACCGATTGACTCGCTCTTGCAACTCTCTCTGGTATTTCGGTGATCAATATATAGTGATCACCAAATGGCATTAATCGTAAATACCCATAGAAATTCAAATCCCTCGCGCTCCAAAAGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession YP_425029.1
Location 134-481
Gene Name AV2
Protein Name AV2 protein
Coding Region ATGTGGGACCCTTTAGAGAACGAATTCCCTGAAACCGTTCACGGTTTCCGTTCTATGCTTGCGGTGAAGTATATGCAGGAGATTGCGAAGAGCTACGAACCTAGCACATTGGGTTTTGAATACGTCCGTGATCTTATCTCCGTTCTGAGGTGTAAGGATTATGTCCAAGCGTCCTGCAAGTATGGCGTATTCCTCTCCAATTTCTTCCGCGCGTCGAAGGCTGAACTTCGACAGTCCTCGCCCATCAGTTGCTGCTGCCCTTACTGCCCCAGGCATAAGGAGAAGAAGATGGACCAACAGGCCCATGAACAGAAAGCCCAGGTTCTACAGAATGTATCGAACCCCTGA
Protein Sequence MWDPLENEFPETVHGFRSMLAVKYMQEIAKSYEPSTLGFEYVRDLISVLRCKDYVQASCKYGVFLSNFFRASKAELRQSSPISCCCPYCPRHKEKKMDQQAHEQKAQVLQNVSNP

NCBI Accession YP_425030.1
Location 294-1064
Gene Name AV1
Protein Name coat protein
Coding Region ATGTCCAAGCGTCCTGCAAGTATGGCGTATTCCTCTCCAATTTCTTCCGCGCGTCGAAGGCTGAACTTCGACAGTCCTCGCCCATCAGTTGCTGCTGCCCTTACTGCCCCAGGCATAAGGAGAAGAAGATGGACCAACAGGCCCATGAACAGAAAGCCCAGGTTCTACAGAATGTATCGAACCCCTGATGTTCCTAAGGGCTGTGAGGGCCCATGTAAGGTGCAATCGTTCGATGCCAAAGACGATATTGGGCACATGGGTAAGGTTATTTGTTTGTCTGATGTTACAAGAGGTATTGGGCTGACCCACCGAGTGGGTAAGCGTTTCTGTGTGAAATCATTGTATTTCGTAGGGAAAATATGGATGGACGAGAATATCAAGGTGAAAAACCACACGAACACCGTTATGTTTTGGATTGTTAGGGATCGGCGACCTACGGGAACTCCATTGGATTTCCAGCAGGTGTTTAATGTCTACGATAACGAGCCCGCCACTGCTACAGTCAAGAACGACAAACGTGATCGTTTCCAGGTTTTAAGGAGGTTCCATGCAACGGTGACCGGAGGGCAATATGCAGCTAAGGAGTCTGCTATTATTAGGAAGTTCTATCGTGTGAACAATTATGTTGTTTACAACCACCAGGAGGCCGGAAAATACGAGAACCATACTGAGAATGCTTTGCTCTTGTACATGGCATGTACGCATGCCTCTAATCCTGTGTATGCTACTTTGAAATGTAGGAGTTATTTCTACGATACTGTAACGAATTAA
Protein Sequence MSKRPASMAYSSPISSARRRLNFDSPRPSVAAALTAPGIRRRRWTNRPMNRKPRFYRMYRTPDVPKGCEGPCKVQSFDAKDDIGHMGKVICLSDVTRGIGLTHRVGKRFCVKSLYFVGKIWMDENIKVKNHTNTVMFWIVRDRRPTGTPLDFQQVFNVYDNEPATATVKNDKRDRFQVLRRFHATVTGGQYAAKESAIIRKFYRVNNYVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKCRSYFYDTVTN

NCBI Accession YP_425031.1
Location 1067-1471
Gene Name AC3
Protein Name AC3 protein
Coding Region ATGGATTCACGCACAGGGGAATACATCACTGCAGCTCAAGCGACGAGTGGCGTATATACCTGGGATATGGCAAATCCCCTGTATTTCAAGATCCTAGACCACCTGGACAGGCCGTTCCTCCGCAACCACGACATCATAACCGTCCAAGTGAGGTTCAACCACAACCTGAGGAAAGCCTTGGGGATTCACAAATGTTTCATAACCTTCCGGATCTGGACTCGTTTACATCCTCAGACATGGCGTTTCTTGAGGGTCTTACGCAATCAAGTTCTTGGGTACTTAGATAGATTAGGAGTTATTAGTATTAATAATGTAATTAGGGCTTTTGATCATGTATTATACAATGTAATTCAAGGCACAATTCAGGTGCAACAAACTGAGTCAATAAAATTCAACCTTTATTAA
Protein Sequence MDSRTGEYITAAQATSGVYTWDMANPLYFKILDHLDRPFLRNHDIITVQVRFNHNLRKALGIHKCFITFRIWTRLHPQTWRFLRVLRNQVLGYLDRLGVISINNVIRAFDHVLYNVIQGTIQVQQTESIKFNLY

NCBI Accession YP_425032.1
Location 1185-1619
Gene Name AC2
Protein Name AC2 protein
Coding Region ATGCGTCGTTCGTCACCCTCACAGAGCCATTGTACTCAGGTGCCCATCAAAATCGAGCATCAGAAGGTGAGGAAGAAGTACAATCGCAGGAAGAGGGTGGACCTTGAATGCGGGTGCACATACTTCCGCAGTCTCAACTGTCACAACCATGGATTCACGCACAGGGGAATACATCACTGCAGCTCAAGCGACGAGTGGCGTATATACCTGGGATATGGCAAATCCCCTGTATTTCAAGATCCTAGACCACCTGGACAGGCCGTTCCTCCGCAACCACGACATCATAACCGTCCAAGTGAGGTTCAACCACAACCTGAGGAAAGCCTTGGGGATTCACAAATGTTTCATAACCTTCCGGATCTGGACTCGTTTACATCCTCAGACATGGCGTTTCTTGAGGGTCTTACGCAATCAAGTTCTTGGGTACTTAGATAG
Protein Sequence MRRSSPSQSHCTQVPIKIEHQKVRKKYNRRKRVDLECGCTYFRSLNCHNHGFTHRGIHHCSSSDEWRIYLGYGKSPVFQDPRPPGQAVPPQPRHHNRPSEVQPQPEESLGDSQMFHNLPDLDSFTSSDMAFLEGLTQSSSWVLR

NCBI Accession YP_425033.1
Location 1513-2607
Gene Name AC1
Protein Name replication protein
Coding Region ATGGCTCCCTCTAAACGCTTTAACATTTATTGCAAAAATTATTTCCTTACTTATCCCAAATGCTCTCTTACTAAAGAGGAAACACTTTCCCAAATCCAAAACCTAAACACCCCAACCAACAAAAAATACATTAAGGTCTGCAGAGAACTCCACGAGAATGGGGAACCTCATATTCACGTGCTCATCCAGTTCGAGGGGAAATACAAGTGCCAGAATCAGCGATTCTTCGACCTGGTCTCCCCAAACCGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCAAGCTCAGATGTCAAGTCCTACATCGACAAGGACGGCGACACCATCGAATGGGGAGAGTTTCAGATCGACGGAAGATCTGCCAGAGGGGGACAACAGACAGCCAACGACGCTTACGCCGCAGCACTTAACACAGGCAGTAAGCCGGAGGCTCTTAGAGTACTTAGGGAACTAGCCCCTAAAGATTATGTTTTACAATTTCATAATTTAAATGCTAACTTAGATAGGATTTTTACACCTCCAATGGAGGTTTATGTTTCTCCTTTTTCTGTCTCTTCTTTTGATCGAGTTCCGGAAGAACTCGAAGAGTGGGCGTGCGAGAATGTAGTGGCGGCCGCTGCGCGGCCTCTGAGACCCTTAAGTTTAGTGGTAGAAGGTGACAGTAGAACAGGGAAGACGATGTGGGCCAGGTCATTAGGTCCACATAATTACTTGTGTGGGCATCTAGACCTAAGCCCAAAGGTGTACAGCAACGACGCATGGTACAACGTCATCGATGACGTTGATCCCCATTTTCTCAAACACTTTAAAGAGTTTATGGGGGCCCAGAGGGACTGGCAAAGCAATACCAAGTACGGCAAGCCAGTTCAAATTAAAGGCGGGATCCCAACAATCTTCCTTTGCAATCCAGGGCCCAATTCCAGCTATAAAGAGTACCTGGACGAGGAAAAGAATTCCGCTTTAAAGACGTGGGCTTTAAAAAATGCGTCGTTCGTCACCCTCACAGAGCCATTGTACTCAGGTGCCCATCAAAATCGAGCATCAGAAGGTGAGGAAGAAGTACAATCGCAGGAAGAGGGTGGACCTTGA
Protein Sequence MAPSKRFNIYCKNYFLTYPKCSLTKEETLSQIQNLNTPTNKKYIKVCRELHENGEPHIHVLIQFEGKYKCQNQRFFDLVSPNRSAHFHPNIQGAKSSSDVKSYIDKDGDTIEWGEFQIDGRSARGGQQTANDAYAAALNTGSKPEALRVLRELAPKDYVLQFHNLNANLDRIFTPPMEVYVSPFSVSSFDRVPEELEEWACENVVAAAARPLRPLSLVVEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEYLDEEKNSALKTWALKNASFVTLTEPLYSGAHQNRASEGEEEVQSQEEGGP

NCBI Accession YP_425034.1
Location 2148-2450
Gene Name AC4
Protein Name AC4 protein
Coding Region ATGGGGAACCTCATATTCACGTGCTCATCCAGTTCGAGGGGAAATACAAGTGCCAGAATCAGCGATTCTTCGACCTGGTCTCCCCAAACCGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCAAGCTCAGATGTCAAGTCCTACATCGACAAGGACGGCGACACCATCGAATGGGGAGAGTTTCAGATCGACGGAAGATCTGCCAGAGGGGGACAACAGACAGCCAACGACGCTTACGCCGCAGCACTTAACACAGGCAGTAAGCCGGAGGCTCTTAGAGTACTTAGGGAACTAG
Protein Sequence MGNLIFTCSSSSRGNTSARISDSSTWSPQTGQHISIRTFRELNQAQMSSPTSTRTATPSNGESFRSTEDLPEGDNRQPTTLTPQHLTQAVSRRLLEYLGN