Sida interveinal bright yellow virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_018591025.1
Isolate Mexico: Queretaro
Release date 2021/6/1
Submitter Sanchez-Luna,S., Martinez-Marrero,N., Avalos-Calleros,J.A., Ambriz-Granados,S., Arguello-Astorga,G.R.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_055602
ACCGGATGGCCGCGCGATTTTTCCCCCCATACGCGCGCACGCTCCTCTTTAATTTGAATTAAAGCGTCTCTGACGCGATGTCGTCCAATGATATTACGCCTGACGAGCCTAGATATTTTCAACAACTTGGGCGCTAAGTTGTTGGGTGTCGGTTATAAAATTAAAGAGGCTTTGGCCCACTGTCTTTAATTCAAAATGCCTAAGCGCGATCTCCCATGGCGCTCGATCGCGGGAACCTCAAAGGTTAGCCGCAATGCTAACTATTCTCCTCGCGGAGGGAGTGGGCCAAGGGTGAACAAGGCCTCTGAATGGGTGAACAGGCCCATATACAGGAAGCCCAGGATCTACAGGATCATGAGAGGCCCTGATGTTCCAAAGGGTTGTGAAGGCCCGTGTAAGGTCCAGTCCTACGAGCAGCGTCATGATATCTCCCATGTGGGTAAGGTTATGTGTGTGTCTGATATCACACGTGGTAATGGGCTTACTCATCGAGTCGGTAAGCGTTTTTGTGTTAAGTCCATTTATATTTTAGGTGAGGTGTGGATGGATGATAATATTAAGTTGAAGAACCACACGAACAGTGTCATGTTCTGGTTGGTTAGGGATCGTAGACCGTATGGCATTCCTATGGACTTTGGACAGGTGTTCAACATGTTTGACAACGAGCCCAGTACTGCGACGATCAAGAACGACCTTCGAGATCGTTTCCAGGTGATGCACAAGTTCTACGCCAAGGTTACCGGTGGTCAATATGCAAGCAACGAGCAGGCAATTGTTAGGCGTTTCTGGAAGATTAATAACTACGTTGTGTATAACCACCAGGAAGCTGGGAAATACGATAACCATACGGAGAACGCCCTTTTATTGTATATGGCATGTACTCATGCCTCTAACCCCGTGTATGCAACGCTGAAGATTCGGATTTACTTCTACGATTCGATTCAAAATTAATAAAGTTTGAATTTTATTGAATGGTCTTCCAGTACATAATTTACATACGATCTGTCCGTCGCGAAACGAACGGCTCTGATTACATTATTTAATGAAATTACGCCTAACATATCTAAATACATATTAACTAAATGCCTAAACCTATTTAAATAACTCGACCCAGAAGCTGTCATCGATGTCGTCCAGACTTGGAAGTTCAGGTAAGCTTTGTGGAGATGCAACGCTTTCCTCAGGTTGTGGTTGAACCGTATTTGTACGTTGTATACTCTGGTATTCGTGTATATTAGGTCCTCTACTCGGTACATCTTGAAATATAGGGGATTTTCTATCTCCCAGATATAGACGCCATCCTCTGCCTGAGGTGCAGTGATGAGCTCCCCTGTGCGTGAATCCATGCCCTGTGCAGCCTATGTGGAAGTAGATGGAGCACCCGCACTCTAGATCAATCCGCCTTCTCCTGATGGCCCTCTTCTTGGCTTGTCTGTGTGCTGTCTTGATAGAGGGCGGATGTGAGGGTGATGAAGATCGCATTCTTGATGGTCCAGTTTCTGAGGCCTATGTTTTCCTCTTTGTTCAGGAAATCTTTATAGCTGGCACCCTCACCAGGATTGCAAAGCACGATTGATGGGATCCCTCCTTTAATTTGAACTGGCTTGCCGTATTTGCAATTTGACTGCCAGTCCTTCTGGGCCCCCAGAAGTTCTTTCCAGTGCTTCATCTTTAGATAATGCGGTGCGACGTCATCAATGACGTTATACTCCACTTCGTTTGAGAACACTTTGGAATTGAAGTCCAGATGTCCACTGAGATAATTATGTGGGCCTAATGCACGAGCCCACATCGTCTTCCCTGTTCTTGAATCACCTTCTACTATGATACTAACAGGTCGTTCTGGCCGCGCAGCGGCACCCCTTCCAAAATAATCATCGGCCCACTCTTGCATTTCGTCCGGCACATTAGTGAAAGAGGAGAGTTGAAAAGGAGGAACCCACCGTTCCGGAGCTTTTTGGAATATCTTGGTTGCGTTGGCGACTAGGTTATGATGTTGAAGGAAGAAATGCTGTGGTTGCTCTTCCCTGATTATTCGCAGAGCCTCCTCTGCGCATGTTGCATTCAACGCCTTGGCATATGAGTCGTTAGCAGATTGCTGACCTCCTCTAGCAGATCTGCCGTCGACCTGGAATTTGCCCCATTCGAGTGTATCTCCGTCCTTGTCGATGTAGGACTTGACGTCGGAGCTGGATTTAGCTCCCTGTATGTTCGGATGGAAATGTGCTGACCTGGTTGGGGAGACCAGATCGAAGAATCTGTTATTCGTGCATTGGTATTTGCCTTCGAACTGAATGAGGACGTGGAGATGAGGCTCCCCATTCTCGTGTAGCTCTCTGCAGATTTTGATGAATTTCTTGTCAACTGGGGTTGTTAGGTTCTGTAATTGGGAAAGTGCTTCTTCTTTAGTAAGAGAGCACTGGGGATAAGTGAGGAAATAGTTTTTAGCTGAGACTTTGAAACGCTTAACTGATGGCATTTTTGTAATAAGAAGGGTGTACCCCGGTTGAGCTCTCAAACATCTGTGCTATCAATTGGGGTAATGGGTTACAATATATACTACAACTCTCTTTAGTGGTTTTGAACACGTGGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession YP_010087869.1
Location 196-951
Gene Name AV1
Protein Name coat protein
Coding Region ATGCCTAAGCGCGATCTCCCATGGCGCTCGATCGCGGGAACCTCAAAGGTTAGCCGCAATGCTAACTATTCTCCTCGCGGAGGGAGTGGGCCAAGGGTGAACAAGGCCTCTGAATGGGTGAACAGGCCCATATACAGGAAGCCCAGGATCTACAGGATCATGAGAGGCCCTGATGTTCCAAAGGGTTGTGAAGGCCCGTGTAAGGTCCAGTCCTACGAGCAGCGTCATGATATCTCCCATGTGGGTAAGGTTATGTGTGTGTCTGATATCACACGTGGTAATGGGCTTACTCATCGAGTCGGTAAGCGTTTTTGTGTTAAGTCCATTTATATTTTAGGTGAGGTGTGGATGGATGATAATATTAAGTTGAAGAACCACACGAACAGTGTCATGTTCTGGTTGGTTAGGGATCGTAGACCGTATGGCATTCCTATGGACTTTGGACAGGTGTTCAACATGTTTGACAACGAGCCCAGTACTGCGACGATCAAGAACGACCTTCGAGATCGTTTCCAGGTGATGCACAAGTTCTACGCCAAGGTTACCGGTGGTCAATATGCAAGCAACGAGCAGGCAATTGTTAGGCGTTTCTGGAAGATTAATAACTACGTTGTGTATAACCACCAGGAAGCTGGGAAATACGATAACCATACGGAGAACGCCCTTTTATTGTATATGGCATGTACTCATGCCTCTAACCCCGTGTATGCAACGCTGAAGATTCGGATTTACTTCTACGATTCGATTCAAAATTAA
Protein Sequence MPKRDLPWRSIAGTSKVSRNANYSPRGGSGPRVNKASEWVNRPIYRKPRIYRIMRGPDVPKGCEGPCKVQSYEQRHDISHVGKVMCVSDITRGNGLTHRVGKRFCVKSIYILGEVWMDDNIKLKNHTNSVMFWLVRDRRPYGIPMDFGQVFNMFDNEPSTATIKNDLRDRFQVMHKFYAKVTGGQYASNEQAIVRRFWKINNYVVYNHQEAGKYDNHTENALLLYMACTHASNPVYATLKIRIYFYDSIQN

NCBI Accession YP_010087870.1
Location 948-1346
Gene Name AC3
Protein Name replication enhancer protein
Coding Region ATGGATTCACGCACAGGGGAGCTCATCACTGCACCTCAGGCAGAGGATGGCGTCTATATCTGGGAGATAGAAAATCCCCTATATTTCAAGATGTACCGAGTAGAGGACCTAATATACACGAATACCAGAGTATACAACGTACAAATACGGTTCAACCACAACCTGAGGAAAGCGTTGCATCTCCACAAAGCTTACCTGAACTTCCAAGTCTGGACGACATCGATGACAGCTTCTGGGTCGAGTTATTTAAATAGGTTTAGGCATTTAGTTAATATGTATTTAGATATGTTAGGCGTAATTTCATTAAATAATGTAATCAGAGCCGTTCGTTTCGCGACGGACAGATCGTATGTAAATTATGTACTGGAAGACCATTCAATAAAATTCAAACTTTATTAA
Protein Sequence MDSRTGELITAPQAEDGVYIWEIENPLYFKMYRVEDLIYTNTRVYNVQIRFNHNLRKALHLHKAYLNFQVWTTSMTASGSSYLNRFRHLVNMYLDMLGVISLNNVIRAVRFATDRSYVNYVLEDHSIKFKLY

NCBI Accession YP_010087871.1
Location 1093-1482
Gene Name AC2
Protein Name transactivator protein
Coding Region ATGCGATCTTCATCACCCTCACATCCGCCCTCTATCAAGACAGCACACAGACAAGCCAAGAAGAGGGCCATCAGGAGAAGGCGGATTGATCTAGAGTGCGGGTGCTCCATCTACTTCCACATAGGCTGCACAGGGCATGGATTCACGCACAGGGGAGCTCATCACTGCACCTCAGGCAGAGGATGGCGTCTATATCTGGGAGATAGAAAATCCCCTATATTTCAAGATGTACCGAGTAGAGGACCTAATATACACGAATACCAGAGTATACAACGTACAAATACGGTTCAACCACAACCTGAGGAAAGCGTTGCATCTCCACAAAGCTTACCTGAACTTCCAAGTCTGGACGACATCGATGACAGCTTCTGGGTCGAGTTATTTAAATAG
Protein Sequence MRSSSPSHPPSIKTAHRQAKKRAIRRRRIDLECGCSIYFHIGCTGHGFTHRGAHHCTSGRGWRLYLGDRKSPIFQDVPSRGPNIHEYQSIQRTNTVQPQPEESVASPQSLPELPSLDDIDDSFWVELFK

NCBI Accession YP_010087872.1
Location 1394-2479
Gene Name AC1
Protein Name replication protein
Coding Region ATGCCATCAGTTAAGCGTTTCAAAGTCTCAGCTAAAAACTATTTCCTCACTTATCCCCAGTGCTCTCTTACTAAAGAAGAAGCACTTTCCCAATTACAGAACCTAACAACCCCAGTTGACAAGAAATTCATCAAAATCTGCAGAGAGCTACACGAGAATGGGGAGCCTCATCTCCACGTCCTCATTCAGTTCGAAGGCAAATACCAATGCACGAATAACAGATTCTTCGATCTGGTCTCCCCAACCAGGTCAGCACATTTCCATCCGAACATACAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGAGATACACTCGAATGGGGCAAATTCCAGGTCGACGGCAGATCTGCTAGAGGAGGTCAGCAATCTGCTAACGACTCATATGCCAAGGCGTTGAATGCAACATGCGCAGAGGAGGCTCTGCGAATAATCAGGGAAGAGCAACCACAGCATTTCTTCCTTCAACATCATAACCTAGTCGCCAACGCAACCAAGATATTCCAAAAAGCTCCGGAACGGTGGGTTCCTCCTTTTCAACTCTCCTCTTTCACTAATGTGCCGGACGAAATGCAAGAGTGGGCCGATGATTATTTTGGAAGGGGTGCCGCTGCGCGGCCAGAACGACCTGTTAGTATCATAGTAGAAGGTGATTCAAGAACAGGGAAGACGATGTGGGCTCGTGCATTAGGCCCACATAATTATCTCAGTGGACATCTGGACTTCAATTCCAAAGTGTTCTCAAACGAAGTGGAGTATAACGTCATTGATGACGTCGCACCGCATTATCTAAAGATGAAGCACTGGAAAGAACTTCTGGGGGCCCAGAAGGACTGGCAGTCAAATTGCAAATACGGCAAGCCAGTTCAAATTAAAGGAGGGATCCCATCAATCGTGCTTTGCAATCCTGGTGAGGGTGCCAGCTATAAAGATTTCCTGAACAAAGAGGAAAACATAGGCCTCAGAAACTGGACCATCAAGAATGCGATCTTCATCACCCTCACATCCGCCCTCTATCAAGACAGCACACAGACAAGCCAAGAAGAGGGCCATCAGGAGAAGGCGGATTGA
Protein Sequence MPSVKRFKVSAKNYFLTYPQCSLTKEEALSQLQNLTTPVDKKFIKICRELHENGEPHLHVLIQFEGKYQCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYIDKDGDTLEWGKFQVDGRSARGGQQSANDSYAKALNATCAEEALRIIREEQPQHFFLQHHNLVANATKIFQKAPERWVPPFQLSSFTNVPDEMQEWADDYFGRGAAARPERPVSIIVEGDSRTGKTMWARALGPHNYLSGHLDFNSKVFSNEVEYNVIDDVAPHYLKMKHWKELLGAQKDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDFLNKEENIGLRNWTIKNAIFITLTSALYQDSTQTSQEEGHQEKAD

NCBI Accession YP_010087873.1
Location 2065-2322
Gene Name AC4
Protein Name AL4
Coding Region ATGGGGAGCCTCATCTCCACGTCCTCATTCAGTTCGAAGGCAAATACCAATGCACGAATAACAGATTCTTCGATCTGGTCTCCCCAACCAGGTCAGCACATTTCCATCCGAACATACAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGAGATACACTCGAATGGGGCAAATTCCAGGTCGACGGCAGATCTGCTAGAGGAGGTCAGCAATCTGCTAACGACTCATATGCCAAGGCGTTGA
Protein Sequence MGSLISTSSFSSKANTNARITDSSIWSPQPGQHISIRTYRELNPAPTSSPTSTRTEIHSNGANSRSTADLLEEVSNLLTTHMPRR