Senecio yellow mosaic virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_000860065.1
Isolate China:Guangxi
Release date 2015/2/13
Submitter Huang,J.F., Zhou,X.P., Cai,J.H., Li,G.X., Zhou,X.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_006995
ACCAGAAGGCCCGCGCCCCGCTTTTATTATGGCCCCTCCACTAATTTATGTCCGCCAGTAATAATGGGCCCTGGGAGCCTATTAAATTGACTGCTCCTCTTTATATAGTGGGCTCTGTATGTCATGTCTATTAAAATGTGGGATCCACTTTTAAACGAGTTTCCAGAAACTGTACATGGATTTAGGTGTATGCTTGCAATAAAATATCTGCAGCTTTGTGAGTCTACATACGCTCCTGATACTATTGGATTTGATTTAATACGCGACCTTATATTGGTCATAAGGGCTAGAGATTATGTCGAAGCGACCAGGAGATATAATCATTTCCACTCCCGCATCCAAAGTACGCCGTCGTCTGAATTTCGACAGCCCATACAGCAGTCGTGCTGTTGCCCCCACTGTCCTAGGCATAAGCCGAAAGAGAACATGGGTGCAACGTCCCATGTATCGGAAACCAAGACTATATAGAATGTATAGGAGCCCTGATGTTCCTAGGGGTTGTGAAGGTCCGTGTAAGGTTCAATCCTTTGAACAGAGACATGATATAGCTCATACTGGAAAGGTCATATGTATTTCTGATGTTACTAGGGGGAATGGTATAACTCACCGGGTAGGGAAGCGTTTTTGTGTTAAGTCTGTTTATATATTAGGTAAAGTTTGGATGGATGAAAACATCAAGGTTAAGAATCATACAAATACAGTTATGTTCTATGTTGTAAGAGATAGACGTCCGTATGGTACTCCTCAAGACTTTGGACAGGTTTTTAATATGTATGATAATGAACCGAGCACTGCGACTGTTAAGAATGATATGAGGGATCGATTCCAGGTTTTGAGGAAGTTTTCAGCAACTGTTACAGGTGGTCAGTATGCGTCAAAGGAGCAAGCCATAGTAAAGAGATTTATGAAGATAAACAATCATGTTACATACAATCATCAAGAAGCTGCCAAATATGAAAATCATACTGAAAATGCTGTATTGTTGTATATGGCATGTACTCATGCATCTAATCCTGTGTATGCTACTTTAAAAATAAGAATCTATTTCTATGATTCTACAATGAATTAATAAATATTAAATTTTATTTCATGTTCTTCAACTACATCAATTGTTTTGTCTAATACATCATATAATACATGACCAAATGCTCTAATACAGTTGTTAATACTAATAACACCTAAAGAATCTAAATACTTAATCACTTGGGTTTTAAATACCCTCAAGAAATGCGATGTCTGAGGTTGTAAGGCTGTGAATATCCTCAAGTTGAGATAACATTTGTGAATCCCCAACGCCTTCCTGAGGTTGTGGTTGAACCGTATTTGGATATGGATAATGTCGTGGTTTTCGTTGAATGGCCGCCGTTGGTGGTTGAGGATCTTGAAATATAGGGGATTTATGATTTCCCAGGTATGTACGCCATTCATTGCTTGAGCTGCAGTGATGGACTCCCCTGTGCGTAAATCCATGATGTTCGCAGTTTATTGTTCTGTATATGGAACACCCACACGGTAGATCAATTCTCTTCCTGCGAATTGGTTTCTTGGCCTGTTTGTGAATCACTTTGATGGGTGTAAAGTGGTTCTGTGAGAATGATGAAGGTTGCATTTTTTAATGCCCACTCCTTTAAAGCACTGTTTTTATCCTCTTCCAAGAATTCTATATATGATGAAGTAGGTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCACCTTTAATTTGAATTGGCTTTCCGTATTTTGTATTTGACTGCCAGTCCCTTTGGGCCCCCATGAATTCTTTAAAGTGCTTTAGGTAGTGGGGATCAACGTCATCGATGACGTTGTACCAGGCGCTGTTCGAATATACCTTGGGGCTTAAGTCTAGGTGTCCACATAAGTAATTGTGTGGCCCCAGAGACCTGGCCCACGCGGTCTTACCTGTACGACTATCACCTTCGATCACGATACTTTTAGGTCTCCACGGCCGCGCAGCGGTGTCTCTTACATTTTCTGATACCCAATCCTTTAGTTCATCTGGGACTTGAGTGAATGTTGAATTATGAAAAGGAGAAACATATACCTCTGATGGAGGCTTGAAGATCCTATCTAGATTATTATTTAGGTTATGAAATTGTAAAACATAGTCCTTTGGGACTAGTTCTTTAATAATCTCAAGAGCCTCATGCTTACTTCCCGCGTTAATTGCCTGGGCGTAAGCATCGTTTGTAGATTGTAGACCCCCTCTTGCAGATCGTCCGTCGATCTGAAATTCTCCCCATTCGATTGTGTCACCGTCCTTGTCCAGATAGGACTTGACGTCGGAGCTTGATTTAGCTCCCTGAATATTTGGATGGAAATGTGTTGACCTGGTTGGGGAGACCATGTCGAAGAATCTGTTATTCGAGCATTTGTATTTCCCCTCGAATTGCATAAGCACGTGGAGATGAGGGCTCCCATCCTCGTGTAATTCTCTGCAGATCTTTATAAATTTTTTATTAATTGGAGTTTTTAGGTTTTTGATTTGGGAAAGTGCTTCCTCTTTGGTGAGGGAGCAATGTGGATATGTGAGGAAATAGTTTTTTGCATTTATTTGAAAACGTTTGGGAGGAGCCATTGACCAGGTCAACTGGTACCAATACCATCTAACGCATGTAATCGGGGAAAAGGTCACAATATATAGTATGGTACCTAATGGCATAATTGTAATTCTTTACAGAGTTACTTTAATTTGAAATTTATAAAGCGGGCCTTCTGTATAATATT

Gene Information

NCBI Accession YP_232874.1
Location 124-468
Gene Name AV2
Protein Name AV2 protein
Coding Region ATGTCTATTAAAATGTGGGATCCACTTTTAAACGAGTTTCCAGAAACTGTACATGGATTTAGGTGTATGCTTGCAATAAAATATCTGCAGCTTTGTGAGTCTACATACGCTCCTGATACTATTGGATTTGATTTAATACGCGACCTTATATTGGTCATAAGGGCTAGAGATTATGTCGAAGCGACCAGGAGATATAATCATTTCCACTCCCGCATCCAAAGTACGCCGTCGTCTGAATTTCGACAGCCCATACAGCAGTCGTGCTGTTGCCCCCACTGTCCTAGGCATAAGCCGAAAGAGAACATGGGTGCAACGTCCCATGTATCGGAAACCAAGACTATATAG
Protein Sequence MSIKMWDPLLNEFPETVHGFRCMLAIKYLQLCESTYAPDTIGFDLIRDLILVIRARDYVEATRRYNHFHSRIQSTPSSEFRQPIQQSCCCPHCPRHKPKENMGATSHVSETKTI

NCBI Accession YP_232875.1
Location 296-1069
Gene Name AV1
Protein Name cp protein
Coding Region ATGTCGAAGCGACCAGGAGATATAATCATTTCCACTCCCGCATCCAAAGTACGCCGTCGTCTGAATTTCGACAGCCCATACAGCAGTCGTGCTGTTGCCCCCACTGTCCTAGGCATAAGCCGAAAGAGAACATGGGTGCAACGTCCCATGTATCGGAAACCAAGACTATATAGAATGTATAGGAGCCCTGATGTTCCTAGGGGTTGTGAAGGTCCGTGTAAGGTTCAATCCTTTGAACAGAGACATGATATAGCTCATACTGGAAAGGTCATATGTATTTCTGATGTTACTAGGGGGAATGGTATAACTCACCGGGTAGGGAAGCGTTTTTGTGTTAAGTCTGTTTATATATTAGGTAAAGTTTGGATGGATGAAAACATCAAGGTTAAGAATCATACAAATACAGTTATGTTCTATGTTGTAAGAGATAGACGTCCGTATGGTACTCCTCAAGACTTTGGACAGGTTTTTAATATGTATGATAATGAACCGAGCACTGCGACTGTTAAGAATGATATGAGGGATCGATTCCAGGTTTTGAGGAAGTTTTCAGCAACTGTTACAGGTGGTCAGTATGCGTCAAAGGAGCAAGCCATAGTAAAGAGATTTATGAAGATAAACAATCATGTTACATACAATCATCAAGAAGCTGCCAAATATGAAAATCATACTGAAAATGCTGTATTGTTGTATATGGCATGTACTCATGCATCTAATCCTGTGTATGCTACTTTAAAAATAAGAATCTATTTCTATGATTCTACAATGAATTAA
Protein Sequence MSKRPGDIIISTPASKVRRRLNFDSPYSSRAVAPTVLGISRKRTWVQRPMYRKPRLYRMYRSPDVPRGCEGPCKVQSFEQRHDIAHTGKVICISDVTRGNGITHRVGKRFCVKSVYILGKVWMDENIKVKNHTNTVMFYVVRDRRPYGTPQDFGQVFNMYDNEPSTATVKNDMRDRFQVLRKFSATVTGGQYASKEQAIVKRFMKINNHVTYNHQEAAKYENHTENAVLLYMACTHASNPVYATLKIRIYFYDSTMN

NCBI Accession YP_232876.1
Location 1066-1470
Gene Name AC3
Protein Name AC3 protein
Coding Region ATGGATTTACGCACAGGGGAGTCCATCACTGCAGCTCAAGCAATGAATGGCGTACATACCTGGGAAATCATAAATCCCCTATATTTCAAGATCCTCAACCACCAACGGCGGCCATTCAACGAAAACCACGACATTATCCATATCCAAATACGGTTCAACCACAACCTCAGGAAGGCGTTGGGGATTCACAAATGTTATCTCAACTTGAGGATATTCACAGCCTTACAACCTCAGACATCGCATTTCTTGAGGGTATTTAAAACCCAAGTGATTAAGTATTTAGATTCTTTAGGTGTTATTAGTATTAACAACTGTATTAGAGCATTTGGTCATGTATTATATGATGTATTAGACAAAACAATTGATGTAGTTGAAGAACATGAAATAAAATTTAATATTTATTAA
Protein Sequence MDLRTGESITAAQAMNGVHTWEIINPLYFKILNHQRRPFNENHDIIHIQIRFNHNLRKALGIHKCYLNLRIFTALQPQTSHFLRVFKTQVIKYLDSLGVISINNCIRAFGHVLYDVLDKTIDVVEEHEIKFNIY

NCBI Accession YP_232877.1
Location 1211-1609
Gene Name AC2
Protein Name AC2 protein
Coding Region ATGCAACCTTCATCATTCTCACAGAACCACTTTACACCCATCAAAGTGATTCACAAACAGGCCAAGAAACCAATTCGCAGGAAGAGAATTGATCTACCGTGTGGGTGTTCCATATACAGAACAATAAACTGCGAACATCATGGATTTACGCACAGGGGAGTCCATCACTGCAGCTCAAGCAATGAATGGCGTACATACCTGGGAAATCATAAATCCCCTATATTTCAAGATCCTCAACCACCAACGGCGGCCATTCAACGAAAACCACGACATTATCCATATCCAAATACGGTTCAACCACAACCTCAGGAAGGCGTTGGGGATTCACAAATGTTATCTCAACTTGAGGATATTCACAGCCTTACAACCTCAGACATCGCATTTCTTGAGGGTATTTAA
Protein Sequence MQPSSFSQNHFTPIKVIHKQAKKPIRRKRIDLPCGCSIYRTINCEHHGFTHRGVHHCSSSNEWRTYLGNHKSPIFQDPQPPTAAIQRKPRHYPYPNTVQPQPQEGVGDSQMLSQLEDIHSLTTSDIAFLEGI

NCBI Accession YP_232878.1
Location 1518-2597
Gene Name AC1
Protein Name AC1 protein
Coding Region ATGGCTCCTCCCAAACGTTTTCAAATAAATGCAAAAAACTATTTCCTCACATATCCACATTGCTCCCTCACCAAAGAGGAAGCACTTTCCCAAATCAAAAACCTAAAAACTCCAATTAATAAAAAATTTATAAAGATCTGCAGAGAATTACACGAGGATGGGAGCCCTCATCTCCACGTGCTTATGCAATTCGAGGGGAAATACAAATGCTCGAATAACAGATTCTTCGACATGGTCTCCCCAACCAGGTCAACACATTTCCATCCAAATATTCAGGGAGCTAAATCAAGCTCCGACGTCAAGTCCTATCTGGACAAGGACGGTGACACAATCGAATGGGGAGAATTTCAGATCGACGGACGATCTGCAAGAGGGGGTCTACAATCTACAAACGATGCTTACGCCCAGGCAATTAACGCGGGAAGTAAGCATGAGGCTCTTGAGATTATTAAAGAACTAGTCCCAAAGGACTATGTTTTACAATTTCATAACCTAAATAATAATCTAGATAGGATCTTCAAGCCTCCATCAGAGGTATATGTTTCTCCTTTTCATAATTCAACATTCACTCAAGTCCCAGATGAACTAAAGGATTGGGTATCAGAAAATGTAAGAGACACCGCTGCGCGGCCGTGGAGACCTAAAAGTATCGTGATCGAAGGTGATAGTCGTACAGGTAAGACCGCGTGGGCCAGGTCTCTGGGGCCACACAATTACTTATGTGGACACCTAGACTTAAGCCCCAAGGTATATTCGAACAGCGCCTGGTACAACGTCATCGATGACGTTGATCCCCACTACCTAAAGCACTTTAAAGAATTCATGGGGGCCCAAAGGGACTGGCAGTCAAATACAAAATACGGAAAGCCAATTCAAATTAAAGGTGGAATTCCCACTATCTTCCTCTGCAATCCAGGACCTACTTCATCATATATAGAATTCTTGGAAGAGGATAAAAACAGTGCTTTAAAGGAGTGGGCATTAAAAAATGCAACCTTCATCATTCTCACAGAACCACTTTACACCCATCAAAGTGATTCACAAACAGGCCAAGAAACCAATTCGCAGGAAGAGAATTGA
Protein Sequence MAPPKRFQINAKNYFLTYPHCSLTKEEALSQIKNLKTPINKKFIKICRELHEDGSPHLHVLMQFEGKYKCSNNRFFDMVSPTRSTHFHPNIQGAKSSSDVKSYLDKDGDTIEWGEFQIDGRSARGGLQSTNDAYAQAINAGSKHEALEIIKELVPKDYVLQFHNLNNNLDRIFKPPSEVYVSPFHNSTFTQVPDELKDWVSENVRDTAARPWRPKSIVIEGDSRTGKTAWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYIEFLEEDKNSALKEWALKNATFIILTEPLYTHQSDSQTGQETNSQEEN

NCBI Accession YP_232879.1
Location 2138-2440
Gene Name AC4
Protein Name AC4 protein
Coding Region ATGGGAGCCCTCATCTCCACGTGCTTATGCAATTCGAGGGGAAATACAAATGCTCGAATAACAGATTCTTCGACATGGTCTCCCCAACCAGGTCAACACATTTCCATCCAAATATTCAGGGAGCTAAATCAAGCTCCGACGTCAAGTCCTATCTGGACAAGGACGGTGACACAATCGAATGGGGAGAATTTCAGATCGACGGACGATCTGCAAGAGGGGGTCTACAATCTACAAACGATGCTTACGCCCAGGCAATTAACGCGGGAAGTAAGCATGAGGCTCTTGAGATTATTAAAGAACTAG
Protein Sequence MGALISTCLCNSRGNTNARITDSSTWSPQPGQHISIQIFRELNQAPTSSPIWTRTVTQSNGENFRSTDDLQEGVYNLQTMLTPRQLTREVSMRLLRLLKN