Sauropus leaf curl virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_002823285.1
Isolate Thailand: Kamphaengsaen
Release date 2018/8/25
Submitter Shih,S.L., Tsai,W.S., Lee,L.M., Kenyon,L.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_038455
ACCGGATGGCCGCGCAAATTTTTGTCCCCTTTCGCTTTAGTGGTTCCCACGCACTATCTTTGGTCGGCCAATGAGAATGCGCGCTCAAAGCTTAGATATCCGTGTGGTCCCGTCATAAATAACTTCCCCTCGAAGGTAAATTCAAAATGTGGGATCCATTAGTAAACGAGTTTCCCGAAACCGTTCACGGCTTTAGGTGTATGTTAGCAGTCAAATACCTGCAGTTAGTAGAGAAGACGTATTCGCCTGACACATTAGGGCACGATCTTATACGAGATTTAATATCAGTAATTCGTGCTCGCAATTATGTCGAAGCGACCCGCCGATATAGTCATTTCAACTCCCGCCTCGAAGGTACGACGTCGTCTGAACTTCGACACCCCCGTGATGAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACCAACAAAAAAAGGATATGGACCAACAGGCCCATGTATCGCAAGCCCAGATTCTACAGAGTGTACAAAAGCCCTGATGTGCCCCGTGGTTGTGAGGGTCCCTGTAAGGTCCAGTCGTTCGAGAAGAAGCATGATGTGGGTCATACTGGTACATTATTATGTGTGTCGGATGTTACTCGTGGAAATGGGCTTACCCATCGTGTTGGTAAGAGGTTTTGTATTAAGTCTATTTACATTCTGGGTAAGTTATGGATGGATGAGAACATCAAGACGAAGAATCACACGAACACAGTCATGTTCTGGTTAGTTAGGGATAGGCGTCCTATGACAACGCCCTATGGGTTCGGCGAGGCATTCAACATGTACGACAATGAGCCCAGTACAGCCACTATCAAGAACGATCTTCGTGATCGTCTGCAGGTGCTGCATAGGTTTCAAGCCACGCTCACGGGAGGTCAGTACGCGTGCAAGGAACAGGTCATGGTGAAGAGGTTCTGGAAGATCAACAATCACGTCGTGTACAACCATCAGGAGAAGGCTGCTTACGAGAATCACAATGAGAACGCATTAATATTGTATATGGCATGTACTCATGCCTCTAACCCCGTGTATGCTACACTGAAGATCCGCATCTACTTCTATGATTCAGTGCAGAATTAATAAAGATTATATTTTATTATATGTGTCAATTGAGCATCAATTGTGCCCTCCAGTACATCGTACAGTACATGATCAATAGCCCTAATTACATTGTTAATGCTAATAACTCCTAATGTATCTAAATACTTCATACATTGAATATTAAATACTCTTAAGAAACGCCCAGTCTGAGGACGTAAACGAGTCCAGATCTGGCAGATCAGGAAACATTGGTGCATCCCCAGTGCTTTCCTCAGGTTGTAGTTGAACTGGACCTGGATTGTTATTACGTCGTGGTCCGTCAGGAATGGCCTCTCCAGGTGCTTGGTAATCTTGAAATAGAGGGGATTTCTGACCGTCCAGGTATAGACGCCACTCTCTGCCTGAGTTGCAGTGATGTACTCCCCGGTGCGAAAATCCATGGTTTGCACAGGTAATTGGGAAGAAGTACGAGCACCCGCAAGGTAGATCAACTCTCCTCCTGCGGATCGTCTTCTTCTTGGCTATTCTGTGCTGGACTTTGATGGGTACCTGAGTACAGTTGCTCTGAGAGGAAGATGAATTTTGCATTCTTCAGTGCCCACGATTTTAGAGCTGAATTTTTATCCTCATCCAGATATTCCTTATATGATGATGTTGGACCAGGATTGCATAGGAAGATTGTCGGAATGCCCCCTTTAATTTGAATTGGCTTCCCGTACTTGGTATTGCTTTGCCAATCCCTCTGGGCCCCCATGAATTCTTTAAAGTGTTTCAGATAGTGGGGGTCAACATCATCGATGACGTTATACCATGCGTCATTAGAGTAGATCTTGGGGCTCAAGTCTAGATGCCCACAAAGGTAATTATGTGGGCCTAGTGATCTGGCCCACATTGTTTTCCCAGTTCTACTCTCTCCCTCTATCACTATACTCACCGGTCTCCAAGGCCGCGCAGCGGCATCCCTGACATTCTCCTCCGCCCAACATTCAAGTTCTTCCGGAACTTGATCGAATGAAGAAGCTAAAAAAGGAGAAACAAAAACCTCTACGGGAGGTGAAAAAATTCTATCTAAATTAGCATTTAAATTATGAAATTGAAAAATATAATCTTTTGGGAGTTTTTCCCTTATTATATTTAATGCTGCTTCTTTAGAACCTGCATTTAAGGCTTCTGCGCATGCGTCGTTAGCATTCTGGCAGCCCCCTCTAGCACTTCTAGCGTCGATCTGGAATTCTCCCCAGTCGAGGGTGTCTCCGTCCTTGTCCAGATAGGACTTGACGTCGGAGCTGGATTTAGCTCCCTGAATGTTTGGATGGAAATGTGCTGCCCTGGTTGGGGACACCAGGTCGAAGAATCTGTTATTCGAGCAGTTGTATTTCCCTTCGAATTGGATGAGCACGTGGAGATGAGGGCTCCCATCTTCGTGTAACTCTCTGCAGATTTTGATATATTTTTTATTTGTTGGGGTTTTTAGGTTTTGGATTTGGGAAAGTGCTTCTTCCTTTGTGAGTGAGCACTGAGGATATGTAAGAAAATAATTTTTTGCTTTAATAGAAAAACGTCCGGCTCTAGGCATTTTGGAATTGGGGGGCACTCTAAGTCTCTGCAATCGGGGGAAATGGGGGGCAATTTATATGTGCCCCCCAAATGGCATTCTCGTAATTCCTAAAAGAAAGTCAAATTCAAATTCAAATTCTAAAAGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession YP_009506455.1
Location 147-497
Gene Name V2
Protein Name pre-coat protein
Coding Region ATGTGGGATCCATTAGTAAACGAGTTTCCCGAAACCGTTCACGGCTTTAGGTGTATGTTAGCAGTCAAATACCTGCAGTTAGTAGAGAAGACGTATTCGCCTGACACATTAGGGCACGATCTTATACGAGATTTAATATCAGTAATTCGTGCTCGCAATTATGTCGAAGCGACCCGCCGATATAGTCATTTCAACTCCCGCCTCGAAGGTACGACGTCGTCTGAACTTCGACACCCCCGTGATGAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACCAACAAAAAAAGGATATGGACCAACAGGCCCATGTATCGCAAGCCCAGATTCTACAGAGTGTACAAAAGCCCTGA
Protein Sequence MWDPLVNEFPETVHGFRCMLAVKYLQLVEKTYSPDTLGHDLIRDLISVIRARNYVEATRRYSHFNSRLEGTTSSELRHPRDEPCCCPHCPRHQQKKDMDQQAHVSQAQILQSVQKP

NCBI Accession YP_009506456.1
Location 307-1080
Gene Name V1
Protein Name coat protein
Coding Region ATGTCGAAGCGACCCGCCGATATAGTCATTTCAACTCCCGCCTCGAAGGTACGACGTCGTCTGAACTTCGACACCCCCGTGATGAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACCAACAAAAAAAGGATATGGACCAACAGGCCCATGTATCGCAAGCCCAGATTCTACAGAGTGTACAAAAGCCCTGATGTGCCCCGTGGTTGTGAGGGTCCCTGTAAGGTCCAGTCGTTCGAGAAGAAGCATGATGTGGGTCATACTGGTACATTATTATGTGTGTCGGATGTTACTCGTGGAAATGGGCTTACCCATCGTGTTGGTAAGAGGTTTTGTATTAAGTCTATTTACATTCTGGGTAAGTTATGGATGGATGAGAACATCAAGACGAAGAATCACACGAACACAGTCATGTTCTGGTTAGTTAGGGATAGGCGTCCTATGACAACGCCCTATGGGTTCGGCGAGGCATTCAACATGTACGACAATGAGCCCAGTACAGCCACTATCAAGAACGATCTTCGTGATCGTCTGCAGGTGCTGCATAGGTTTCAAGCCACGCTCACGGGAGGTCAGTACGCGTGCAAGGAACAGGTCATGGTGAAGAGGTTCTGGAAGATCAACAATCACGTCGTGTACAACCATCAGGAGAAGGCTGCTTACGAGAATCACAATGAGAACGCATTAATATTGTATATGGCATGTACTCATGCCTCTAACCCCGTGTATGCTACACTGAAGATCCGCATCTACTTCTATGATTCAGTGCAGAATTAA
Protein Sequence MSKRPADIVISTPASKVRRRLNFDTPVMSRAAAPTVLVTNKKRIWTNRPMYRKPRFYRVYKSPDVPRGCEGPCKVQSFEKKHDVGHTGTLLCVSDVTRGNGLTHRVGKRFCIKSIYILGKLWMDENIKTKNHTNTVMFWLVRDRRPMTTPYGFGEAFNMYDNEPSTATIKNDLRDRLQVLHRFQATLTGGQYACKEQVMVKRFWKINNHVVYNHQEKAAYENHNENALILYMACTHASNPVYATLKIRIYFYDSVQN

NCBI Accession YP_009506457.1
Location 1077-1481
Gene Name C3
Protein Name replication enhancement protein
Coding Region ATGGATTTTCGCACCGGGGAGTACATCACTGCAACTCAGGCAGAGAGTGGCGTCTATACCTGGACGGTCAGAAATCCCCTCTATTTCAAGATTACCAAGCACCTGGAGAGGCCATTCCTGACGGACCACGACGTAATAACAATCCAGGTCCAGTTCAACTACAACCTGAGGAAAGCACTGGGGATGCACCAATGTTTCCTGATCTGCCAGATCTGGACTCGTTTACGTCCTCAGACTGGGCGTTTCTTAAGAGTATTTAATATTCAATGTATGAAGTATTTAGATACATTAGGAGTTATTAGCATTAACAATGTAATTAGGGCTATTGATCATGTACTGTACGATGTACTGGAGGGCACAATTGATGCTCAATTGACACATATAATAAAATATAATCTTTATTAA
Protein Sequence MDFRTGEYITATQAESGVYTWTVRNPLYFKITKHLERPFLTDHDVITIQVQFNYNLRKALGMHQCFLICQIWTRLRPQTGRFLRVFNIQCMKYLDTLGVISINNVIRAIDHVLYDVLEGTIDAQLTHIIKYNLY

NCBI Accession YP_009506458.1
Location 1222-1629
Gene Name C2
Protein Name transcriptional activation protein
Coding Region ATGCAAAATTCATCTTCCTCTCAGAGCAACTGTACTCAGGTACCCATCAAAGTCCAGCACAGAATAGCCAAGAAGAAGACGATCCGCAGGAGGAGAGTTGATCTACCTTGCGGGTGCTCGTACTTCTTCCCAATTACCTGTGCAAACCATGGATTTTCGCACCGGGGAGTACATCACTGCAACTCAGGCAGAGAGTGGCGTCTATACCTGGACGGTCAGAAATCCCCTCTATTTCAAGATTACCAAGCACCTGGAGAGGCCATTCCTGACGGACCACGACGTAATAACAATCCAGGTCCAGTTCAACTACAACCTGAGGAAAGCACTGGGGATGCACCAATGTTTCCTGATCTGCCAGATCTGGACTCGTTTACGTCCTCAGACTGGGCGTTTCTTAAGAGTATTTAA
Protein Sequence MQNSSSSQSNCTQVPIKVQHRIAKKKTIRRRRVDLPCGCSYFFPITCANHGFSHRGVHHCNSGREWRLYLDGQKSPLFQDYQAPGEAIPDGPRRNNNPGPVQLQPEESTGDAPMFPDLPDLDSFTSSDWAFLKSI

NCBI Accession YP_009506459.1
Location 1529-2617
Gene Name C1
Protein Name replication-associated protein
Coding Region ATGCCTAGAGCCGGACGTTTTTCTATTAAAGCAAAAAATTATTTTCTTACATATCCTCAGTGCTCACTCACAAAGGAAGAAGCACTTTCCCAAATCCAAAACCTAAAAACCCCAACAAATAAAAAATATATCAAAATCTGCAGAGAGTTACACGAAGATGGGAGCCCTCATCTCCACGTGCTCATCCAATTCGAAGGGAAATACAACTGCTCGAATAACAGATTCTTCGACCTGGTGTCCCCAACCAGGGCAGCACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTATCTGGACAAGGACGGAGACACCCTCGACTGGGGAGAATTCCAGATCGACGCTAGAAGTGCTAGAGGGGGCTGCCAGAATGCTAACGACGCATGCGCAGAAGCCTTAAATGCAGGTTCTAAAGAAGCAGCATTAAATATAATAAGGGAAAAACTCCCAAAAGATTATATTTTTCAATTTCATAATTTAAATGCTAATTTAGATAGAATTTTTTCACCTCCCGTAGAGGTTTTTGTTTCTCCTTTTTTAGCTTCTTCATTCGATCAAGTTCCGGAAGAACTTGAATGTTGGGCGGAGGAGAATGTCAGGGATGCCGCTGCGCGGCCTTGGAGACCGGTGAGTATAGTGATAGAGGGAGAGAGTAGAACTGGGAAAACAATGTGGGCCAGATCACTAGGCCCACATAATTACCTTTGTGGGCATCTAGACTTGAGCCCCAAGATCTACTCTAATGACGCATGGTATAACGTCATCGATGATGTTGACCCCCACTATCTGAAACACTTTAAAGAATTCATGGGGGCCCAGAGGGATTGGCAAAGCAATACCAAGTACGGGAAGCCAATTCAAATTAAAGGGGGCATTCCGACAATCTTCCTATGCAATCCTGGTCCAACATCATCATATAAGGAATATCTGGATGAGGATAAAAATTCAGCTCTAAAATCGTGGGCACTGAAGAATGCAAAATTCATCTTCCTCTCAGAGCAACTGTACTCAGGTACCCATCAAAGTCCAGCACAGAATAGCCAAGAAGAAGACGATCCGCAGGAGGAGAGTTGA
Protein Sequence MPRAGRFSIKAKNYFLTYPQCSLTKEEALSQIQNLKTPTNKKYIKICRELHEDGSPHLHVLIQFEGKYNCSNNRFFDLVSPTRAAHFHPNIQGAKSSSDVKSYLDKDGDTLDWGEFQIDARSARGGCQNANDACAEALNAGSKEAALNIIREKLPKDYIFQFHNLNANLDRIFSPPVEVFVSPFLASSFDQVPEELECWAEENVRDAAARPWRPVSIVIEGESRTGKTMWARSLGPHNYLCGHLDLSPKIYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEDKNSALKSWALKNAKFIFLSEQLYSGTHQSPAQNSQEEDDPQEES

NCBI Accession YP_009506460.1
Location 2203-2460
Gene Name C4
Protein Name C4 protein
Coding Region ATGGGAGCCCTCATCTCCACGTGCTCATCCAATTCGAAGGGAAATACAACTGCTCGAATAACAGATTCTTCGACCTGGTGTCCCCAACCAGGGCAGCACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTATCTGGACAAGGACGGAGACACCCTCGACTGGGGAGAATTCCAGATCGACGCTAGAAGTGCTAGAGGGGGCTGCCAGAATGCTAACGACGCATGCGCAGAAGCCTTAA
Protein Sequence MGALISTCSSNSKGNTTARITDSSTWCPQPGQHISIQTFRELNPAPTSSPIWTRTETPSTGENSRSTLEVLEGAARMLTTHAQKP