Premna leaf curl virus
Basic Information
Genus |
Begomovirus
|
NCBI Assembly |
GCF_002823225.1 |
Isolate |
Viet Nam |
Release date |
2018/8/25 |
Submitter |
She,X., He,Z., Brown,J.K. |
Host |
|
Vector |
|
Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCGATTTTTTTTTAAAGTGGGCCCCGTGATGTGATATGTCGGCCAATCAGTACGCTCCCTCAAAGCTTATTTAGTGCGTGGTCCCCTTTAAGTAGCTTAGCCCCCAAGTTTAATTTGAAAAATGTGGGATCCACTTGAGAACGAATTCCCAGATACGGTGCACGGTCTACGGTGTATGCTGGCCGTAAAATACTGTCAACTTATTGAAGATACATACGCTCCAGATACGTTGGGCTACGATCTTATACGTGACTTGATCCTTGTTATTCGAGCACGTAGCTATGTCGAAGCGACCCGCAGATATAGTCATTTCAACTCCCGCCTCGAAGGTACGTCGCAGGCTGAACTTCGAGTCCCCAGGAATGAGCCGTGCCACTGTCCCCACTGTCCTCGTCACAAACAGAAGGAGGATGTGGGCCAACAGGCCCATGTACCGAAAGCCCAGGATGTACAGGATGTACAGAAGCCCAGATGTTCCAAAGGGCTGTGAAGGCCCATGTAAGGTCCAGTCATTTGAACAGCGACATGATGTGGCCCATACAGGCAAGGTCATTTGTATTTCGGATGTCACTCGTGGTAATGGGCTGACCCATCGTGTAGGGAAGAGGTTTTGCATTAAGTCCGTTTATGTGTTGGGTAAAATCTGGATGGATGAAAACATCAAGGTTAAAAACCACACCAACACTTGTATGTTCTTTGTTGTTAGGGATAGAAGGCCATATGGCACTCCTATGGATTTTGGTCAGGTGTTCAACATGTATGACAATGAGCCCAGTACAGCCACTGTGAAGAACGATCTCAGGGATCGTTTTCAAGTTCTACGCCGTTTTGCAGGAACTGTGACAGGTGGTCAGTATGCTTCCAAGGAGCAGGCTTTGGTTAGGAAGTTCATGAGGGTCAACAATCATGTGGTGTATAACCATCAAGAAACTGCAAAGTATGAGAACCATACTGAGAATGCGTTGTTGTTGTATATGGCATGTACACATGCAAGTAATCCATTGTATGCAACCATGAAGATCAGGATCTATTTTTATGATTCTGTTCAAAATTAATAAACGTTAAATTTTATTATATTTGCTAATTGAGCATCAATTGTGCCCTCAAGTACATCGTATAACACATGAGAAAAAGCCCTAATTACATTGTTAATACTAATCACTCCTAATCTATCTAAATACTTCATACATTGATACTTAAAAACCCTTAAGAAATGCCAGGTCTGAGGATGTAAACGAGTCCAGATCTGGCAGGTCAGAAAACACTGGTGTATCCCCAACGCTTTCCTCAGGTTGTGGTTGAACTGGACCTGGACTGTTATGATGTCTCTGTTTGTCATGAATGTGTTGTGTATGTGGTTGGTTATCTTGAAATAGAGGGGATTTCTGAGCGTCCAGGTATACACGCCACTCTTTGCTTGAGCTGCAGTGATGTACTCCCCTGTGCGAGAATCCATGTGATGCGCAGTTTAGTCCAAGATAGTATGAGCAGCCGCACGGGAGATCAATTCTGCGTCTCCGTGGTGGTCTCTGCTTGGATATCTTGTGTTGGACCTTGATGGGTACCTGAGTACAATGGTTGCGTGAGGGTGATGAATTCTGCATTCTTGATGGACCAGTCTTTGAGTGCTGAATTCTTATCCTCGTCCAAGTACTCTTTATATGATGACGTGGGTCCTGGATTGCAGAGGAAGATTGTTGGGATACCACCTTTAATTTGAATTGGTTTCCCGTACTTCGTGTTGCTTTGCCAGTCCCTCTGGGCCCCCATGAATTCCTTGAAGTGCTTTAGATAGTGGGGGTCGACGTCATCAATGACGTTGTACCAGGCATCATTACTGTACACCTTTGGGCTTAGATCTAGGTGGCCACATAAATAATTATGTGGGCCTAGTGATCTGGCCCACATGGTTTTCCCTGTACGACTATCACCCTCTATTACAATACTCTTGGGCCTCCATGGCCGCGCAGCGGCACCCATGACGTTTTCAGACACCCAGACTTCAAGTTCCTCTGGAACTTGATCAAATGAAGAAGACAAAAAAGGACTAACAAATACTTCTACAGGAGCTTGAAAAATCCTATCTAAATTGGCAGTTAAATTATGGAATTGTAAAACATAATCTTTAGGGGCTAATTCCCTAATTACATTAAGAGCCTCTGACTTACTGCCTGTGTTAAGCGCCTGGGCGTAAGCATCATTGGCTGATTGTTGTCCCCCTCTTGCAGATCGTCCATCGATCTGAAACTCGCCCCAATCGAGGGTGTCGCCGTCCTTATCGATGTAGGACTTGACGTCCGAGCTTGATTTAGCTCCCTGAATGTTTGGATGGTAATGTGCTGACCTGGTTGGGGATACCAGGTCGAAGAATCGTGGATTTTGGCATTGGTATTTGCCCTCGAACTGGATGAGCACATGGAGATGAGGGCTCCCATCTTCATGTAATTCTCTGCAAATCTTAATGTATTTTTTGTTTGTTGGGGTATTTAGGTTTTGCAATTGGGAAAGTGCTTCCTCTTTGGTTAGTGAACACTGAGGGTATGTGAGAAAATAATTTTTGGCATTTATTTTAAATTTTTTAGGGGGAGCCATTGACTTGGTCAATCGGTGTCTCTCAAAGTTGTCCTGCAATTGGTGTATTGGGGTCTTATTTATATGAGACCCCAAATGGCATTCTCGTAATTCCCCAAAGAAATTCAAAATTCAAATTTGAAATCCAAAAGCGGCCATCCGTATAATATT
Gene Information
NCBI Accession
|
YP_009506448.1
|
Location
|
133-501 |
Gene Name
|
av2 |
Protein Name
|
AV2 |
Coding Region
|
ATGTGGGATCCACTTGAGAACGAATTCCCAGATACGGTGCACGGTCTACGGTGTATGCTGGCCGTAAAATACTGTCAACTTATTGAAGATACATACGCTCCAGATACGTTGGGCTACGATCTTATACGTGACTTGATCCTTGTTATTCGAGCACGTAGCTATGTCGAAGCGACCCGCAGATATAGTCATTTCAACTCCCGCCTCGAAGGTACGTCGCAGGCTGAACTTCGAGTCCCCAGGAATGAGCCGTGCCACTGTCCCCACTGTCCTCGTCACAAACAGAAGGAGGATGTGGGCCAACAGGCCCATGTACCGAAAGCCCAGGATGTACAGGATGTACAGAAGCCCAGATGTTCCAAAGGGCTGTGA |
Protein Sequence
|
MWDPLENEFPDTVHGLRCMLAVKYCQLIEDTYAPDTLGYDLIRDLILVIRARSYVEATRRYSHFNSRLEGTSQAELRVPRNEPCHCPHCPRHKQKEDVGQQAHVPKAQDVQDVQKPRCSKGL |
NCBI Accession
|
YP_009506449.1
|
Location
|
178-627 |
Gene Name
|
ac5 |
Protein Name
|
AC5 |
Coding Region
|
ATGCAAAACCTCTTCCCTACACGATGGGTCAGCCCATTACCACGAGTGACATCCGAAATACAAATGACCTTGCCTGTATGGGCCACATCATGTCGCTGTTCAAATGACTGGACCTTACATGGGCCTTCACAGCCCTTTGGAACATCTGGGCTTCTGTACATCCTGTACATCCTGGGCTTTCGGTACATGGGCCTGTTGGCCCACATCCTCCTTCTGTTTGTGACGAGGACAGTGGGGACAGTGGCACGGCTCATTCCTGGGGACTCGAAGTTCAGCCTGCGACGTACCTTCGAGGCGGGAGTTGAAATGACTATATCTGCGGGTCGCTTCGACATAGCTACGTGCTCGAATAACAAGGATCAAGTCACGTATAAGATCGTAGCCCAACGTATCTGGAGCGTATGTATCTTCAATAAGTTGACAGTATTTTACGGCCAGCATACACCGTAG |
Protein Sequence
|
MQNLFPTRWVSPLPRVTSEIQMTLPVWATSCRCSNDWTLHGPSQPFGTSGLLYILYILGFRYMGLLAHILLLFVTRTVGTVARLIPGDSKFSLRRTFEAGVEMTISAGRFDIATCSNNKDQVTYKIVAQRIWSVCIFNKLTVFYGQHTP |
NCBI Accession
|
YP_009506450.1
|
Location
|
293-1066 |
Gene Name
|
av1 |
Protein Name
|
AV1 |
Coding Region
|
ATGTCGAAGCGACCCGCAGATATAGTCATTTCAACTCCCGCCTCGAAGGTACGTCGCAGGCTGAACTTCGAGTCCCCAGGAATGAGCCGTGCCACTGTCCCCACTGTCCTCGTCACAAACAGAAGGAGGATGTGGGCCAACAGGCCCATGTACCGAAAGCCCAGGATGTACAGGATGTACAGAAGCCCAGATGTTCCAAAGGGCTGTGAAGGCCCATGTAAGGTCCAGTCATTTGAACAGCGACATGATGTGGCCCATACAGGCAAGGTCATTTGTATTTCGGATGTCACTCGTGGTAATGGGCTGACCCATCGTGTAGGGAAGAGGTTTTGCATTAAGTCCGTTTATGTGTTGGGTAAAATCTGGATGGATGAAAACATCAAGGTTAAAAACCACACCAACACTTGTATGTTCTTTGTTGTTAGGGATAGAAGGCCATATGGCACTCCTATGGATTTTGGTCAGGTGTTCAACATGTATGACAATGAGCCCAGTACAGCCACTGTGAAGAACGATCTCAGGGATCGTTTTCAAGTTCTACGCCGTTTTGCAGGAACTGTGACAGGTGGTCAGTATGCTTCCAAGGAGCAGGCTTTGGTTAGGAAGTTCATGAGGGTCAACAATCATGTGGTGTATAACCATCAAGAAACTGCAAAGTATGAGAACCATACTGAGAATGCGTTGTTGTTGTATATGGCATGTACACATGCAAGTAATCCATTGTATGCAACCATGAAGATCAGGATCTATTTTTATGATTCTGTTCAAAATTAA |
Protein Sequence
|
MSKRPADIVISTPASKVRRRLNFESPGMSRATVPTVLVTNRRRMWANRPMYRKPRMYRMYRSPDVPKGCEGPCKVQSFEQRHDVAHTGKVICISDVTRGNGLTHRVGKRFCIKSVYVLGKIWMDENIKVKNHTNTCMFFVVRDRRPYGTPMDFGQVFNMYDNEPSTATVKNDLRDRFQVLRRFAGTVTGGQYASKEQALVRKFMRVNNHVVYNHQETAKYENHTENALLLYMACTHASNPLYATMKIRIYFYDSVQN |
NCBI Accession
|
YP_009506451.1
|
Location
|
1063-1467 |
Gene Name
|
ac3 |
Protein Name
|
AC3 |
Coding Region
|
ATGGATTCTCGCACAGGGGAGTACATCACTGCAGCTCAAGCAAAGAGTGGCGTGTATACCTGGACGCTCAGAAATCCCCTCTATTTCAAGATAACCAACCACATACACAACACATTCATGACAAACAGAGACATCATAACAGTCCAGGTCCAGTTCAACCACAACCTGAGGAAAGCGTTGGGGATACACCAGTGTTTTCTGACCTGCCAGATCTGGACTCGTTTACATCCTCAGACCTGGCATTTCTTAAGGGTTTTTAAGTATCAATGTATGAAGTATTTAGATAGATTAGGAGTGATTAGTATTAACAATGTAATTAGGGCTTTTTCTCATGTGTTATACGATGTACTTGAGGGCACAATTGATGCTCAATTAGCAAATATAATAAAATTTAACGTTTATTAA |
Protein Sequence
|
MDSRTGEYITAAQAKSGVYTWTLRNPLYFKITNHIHNTFMTNRDIITVQVQFNHNLRKALGIHQCFLTCQIWTRLHPQTWHFLRVFKYQCMKYLDRLGVISINNVIRAFSHVLYDVLEGTIDAQLANIIKFNVY |
NCBI Accession
|
YP_009506452.1
|
Location
|
1208-1615 |
Gene Name
|
ac2 |
Protein Name
|
AC2 |
Coding Region
|
ATGCAGAATTCATCACCCTCACGCAACCATTGTACTCAGGTACCCATCAAGGTCCAACACAAGATATCCAAGCAGAGACCACCACGGAGACGCAGAATTGATCTCCCGTGCGGCTGCTCATACTATCTTGGACTAAACTGCGCATCACATGGATTCTCGCACAGGGGAGTACATCACTGCAGCTCAAGCAAAGAGTGGCGTGTATACCTGGACGCTCAGAAATCCCCTCTATTTCAAGATAACCAACCACATACACAACACATTCATGACAAACAGAGACATCATAACAGTCCAGGTCCAGTTCAACCACAACCTGAGGAAAGCGTTGGGGATACACCAGTGTTTTCTGACCTGCCAGATCTGGACTCGTTTACATCCTCAGACCTGGCATTTCTTAAGGGTTTTTAA |
Protein Sequence
|
MQNSSPSRNHCTQVPIKVQHKISKQRPPRRRRIDLPCGCSYYLGLNCASHGFSHRGVHHCSSSKEWRVYLDAQKSPLFQDNQPHTQHIHDKQRHHNSPGPVQPQPEESVGDTPVFSDLPDLDSFTSSDLAFLKGF |
NCBI Accession
|
YP_009506453.1
|
Location
|
1515-2603 |
Gene Name
|
ac1 |
Protein Name
|
AC1 |
Coding Region
|
ATGGCTCCCCCTAAAAAATTTAAAATAAATGCCAAAAATTATTTTCTCACATACCCTCAGTGTTCACTAACCAAAGAGGAAGCACTTTCCCAATTGCAAAACCTAAATACCCCAACAAACAAAAAATACATTAAGATTTGCAGAGAATTACATGAAGATGGGAGCCCTCATCTCCATGTGCTCATCCAGTTCGAGGGCAAATACCAATGCCAAAATCCACGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTACCATCCAAACATTCAGGGAGCTAAATCAAGCTCGGACGTCAAGTCCTACATCGATAAGGACGGCGACACCCTCGATTGGGGCGAGTTTCAGATCGATGGACGATCTGCAAGAGGGGGACAACAATCAGCCAATGATGCTTACGCCCAGGCGCTTAACACAGGCAGTAAGTCAGAGGCTCTTAATGTAATTAGGGAATTAGCCCCTAAAGATTATGTTTTACAATTCCATAATTTAACTGCCAATTTAGATAGGATTTTTCAAGCTCCTGTAGAAGTATTTGTTAGTCCTTTTTTGTCTTCTTCATTTGATCAAGTTCCAGAGGAACTTGAAGTCTGGGTGTCTGAAAACGTCATGGGTGCCGCTGCGCGGCCATGGAGGCCCAAGAGTATTGTAATAGAGGGTGATAGTCGTACAGGGAAAACCATGTGGGCCAGATCACTAGGCCCACATAATTATTTATGTGGCCACCTAGATCTAAGCCCAAAGGTGTACAGTAATGATGCCTGGTACAACGTCATTGATGACGTCGACCCCCACTATCTAAAGCACTTCAAGGAATTCATGGGGGCCCAGAGGGACTGGCAAAGCAACACGAAGTACGGGAAACCAATTCAAATTAAAGGTGGTATCCCAACAATCTTCCTCTGCAATCCAGGACCCACGTCATCATATAAAGAGTACTTGGACGAGGATAAGAATTCAGCACTCAAAGACTGGTCCATCAAGAATGCAGAATTCATCACCCTCACGCAACCATTGTACTCAGGTACCCATCAAGGTCCAACACAAGATATCCAAGCAGAGACCACCACGGAGACGCAGAATTGA |
Protein Sequence
|
MAPPKKFKINAKNYFLTYPQCSLTKEEALSQLQNLNTPTNKKYIKICRELHEDGSPHLHVLIQFEGKYQCQNPRFFDLVSPTRSAHYHPNIQGAKSSSDVKSYIDKDGDTLDWGEFQIDGRSARGGQQSANDAYAQALNTGSKSEALNVIRELAPKDYVLQFHNLTANLDRIFQAPVEVFVSPFLSSSFDQVPEELEVWVSENVMGAAARPWRPKSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEDKNSALKDWSIKNAEFITLTQPLYSGTHQGPTQDIQAETTTETQN |
NCBI Accession
|
YP_009506454.1
|
Location
|
2156-2452 |
Gene Name
|
ac4 |
Protein Name
|
AC4 |
Coding Region
|
ATGAAGATGGGAGCCCTCATCTCCATGTGCTCATCCAGTTCGAGGGCAAATACCAATGCCAAAATCCACGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTACCATCCAAACATTCAGGGAGCTAAATCAAGCTCGGACGTCAAGTCCTACATCGATAAGGACGGCGACACCCTCGATTGGGGCGAGTTTCAGATCGATGGACGATCTGCAAGAGGGGGACAACAATCAGCCAATGATGCTTACGCCCAGGCGCTTAACACAGGCAGTAAGTCAGAGGCTCTTAATGTAA |
Protein Sequence
|
MKMGALISMCSSSSRANTNAKIHDSSTWYPQPGQHITIQTFRELNQARTSSPTSIRTATPSIGASFRSMDDLQEGDNNQPMMLTPRRLTQAVSQRLLM |