Premna leaf curl virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_002823225.1
Isolate Viet Nam
Release date 2018/8/25
Submitter She,X., He,Z., Brown,J.K.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_038454
ACCGGATGGCCGCGATTTTTTTTTAAAGTGGGCCCCGTGATGTGATATGTCGGCCAATCAGTACGCTCCCTCAAAGCTTATTTAGTGCGTGGTCCCCTTTAAGTAGCTTAGCCCCCAAGTTTAATTTGAAAAATGTGGGATCCACTTGAGAACGAATTCCCAGATACGGTGCACGGTCTACGGTGTATGCTGGCCGTAAAATACTGTCAACTTATTGAAGATACATACGCTCCAGATACGTTGGGCTACGATCTTATACGTGACTTGATCCTTGTTATTCGAGCACGTAGCTATGTCGAAGCGACCCGCAGATATAGTCATTTCAACTCCCGCCTCGAAGGTACGTCGCAGGCTGAACTTCGAGTCCCCAGGAATGAGCCGTGCCACTGTCCCCACTGTCCTCGTCACAAACAGAAGGAGGATGTGGGCCAACAGGCCCATGTACCGAAAGCCCAGGATGTACAGGATGTACAGAAGCCCAGATGTTCCAAAGGGCTGTGAAGGCCCATGTAAGGTCCAGTCATTTGAACAGCGACATGATGTGGCCCATACAGGCAAGGTCATTTGTATTTCGGATGTCACTCGTGGTAATGGGCTGACCCATCGTGTAGGGAAGAGGTTTTGCATTAAGTCCGTTTATGTGTTGGGTAAAATCTGGATGGATGAAAACATCAAGGTTAAAAACCACACCAACACTTGTATGTTCTTTGTTGTTAGGGATAGAAGGCCATATGGCACTCCTATGGATTTTGGTCAGGTGTTCAACATGTATGACAATGAGCCCAGTACAGCCACTGTGAAGAACGATCTCAGGGATCGTTTTCAAGTTCTACGCCGTTTTGCAGGAACTGTGACAGGTGGTCAGTATGCTTCCAAGGAGCAGGCTTTGGTTAGGAAGTTCATGAGGGTCAACAATCATGTGGTGTATAACCATCAAGAAACTGCAAAGTATGAGAACCATACTGAGAATGCGTTGTTGTTGTATATGGCATGTACACATGCAAGTAATCCATTGTATGCAACCATGAAGATCAGGATCTATTTTTATGATTCTGTTCAAAATTAATAAACGTTAAATTTTATTATATTTGCTAATTGAGCATCAATTGTGCCCTCAAGTACATCGTATAACACATGAGAAAAAGCCCTAATTACATTGTTAATACTAATCACTCCTAATCTATCTAAATACTTCATACATTGATACTTAAAAACCCTTAAGAAATGCCAGGTCTGAGGATGTAAACGAGTCCAGATCTGGCAGGTCAGAAAACACTGGTGTATCCCCAACGCTTTCCTCAGGTTGTGGTTGAACTGGACCTGGACTGTTATGATGTCTCTGTTTGTCATGAATGTGTTGTGTATGTGGTTGGTTATCTTGAAATAGAGGGGATTTCTGAGCGTCCAGGTATACACGCCACTCTTTGCTTGAGCTGCAGTGATGTACTCCCCTGTGCGAGAATCCATGTGATGCGCAGTTTAGTCCAAGATAGTATGAGCAGCCGCACGGGAGATCAATTCTGCGTCTCCGTGGTGGTCTCTGCTTGGATATCTTGTGTTGGACCTTGATGGGTACCTGAGTACAATGGTTGCGTGAGGGTGATGAATTCTGCATTCTTGATGGACCAGTCTTTGAGTGCTGAATTCTTATCCTCGTCCAAGTACTCTTTATATGATGACGTGGGTCCTGGATTGCAGAGGAAGATTGTTGGGATACCACCTTTAATTTGAATTGGTTTCCCGTACTTCGTGTTGCTTTGCCAGTCCCTCTGGGCCCCCATGAATTCCTTGAAGTGCTTTAGATAGTGGGGGTCGACGTCATCAATGACGTTGTACCAGGCATCATTACTGTACACCTTTGGGCTTAGATCTAGGTGGCCACATAAATAATTATGTGGGCCTAGTGATCTGGCCCACATGGTTTTCCCTGTACGACTATCACCCTCTATTACAATACTCTTGGGCCTCCATGGCCGCGCAGCGGCACCCATGACGTTTTCAGACACCCAGACTTCAAGTTCCTCTGGAACTTGATCAAATGAAGAAGACAAAAAAGGACTAACAAATACTTCTACAGGAGCTTGAAAAATCCTATCTAAATTGGCAGTTAAATTATGGAATTGTAAAACATAATCTTTAGGGGCTAATTCCCTAATTACATTAAGAGCCTCTGACTTACTGCCTGTGTTAAGCGCCTGGGCGTAAGCATCATTGGCTGATTGTTGTCCCCCTCTTGCAGATCGTCCATCGATCTGAAACTCGCCCCAATCGAGGGTGTCGCCGTCCTTATCGATGTAGGACTTGACGTCCGAGCTTGATTTAGCTCCCTGAATGTTTGGATGGTAATGTGCTGACCTGGTTGGGGATACCAGGTCGAAGAATCGTGGATTTTGGCATTGGTATTTGCCCTCGAACTGGATGAGCACATGGAGATGAGGGCTCCCATCTTCATGTAATTCTCTGCAAATCTTAATGTATTTTTTGTTTGTTGGGGTATTTAGGTTTTGCAATTGGGAAAGTGCTTCCTCTTTGGTTAGTGAACACTGAGGGTATGTGAGAAAATAATTTTTGGCATTTATTTTAAATTTTTTAGGGGGAGCCATTGACTTGGTCAATCGGTGTCTCTCAAAGTTGTCCTGCAATTGGTGTATTGGGGTCTTATTTATATGAGACCCCAAATGGCATTCTCGTAATTCCCCAAAGAAATTCAAAATTCAAATTTGAAATCCAAAAGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession YP_009506448.1
Location 133-501
Gene Name av2
Protein Name AV2
Coding Region ATGTGGGATCCACTTGAGAACGAATTCCCAGATACGGTGCACGGTCTACGGTGTATGCTGGCCGTAAAATACTGTCAACTTATTGAAGATACATACGCTCCAGATACGTTGGGCTACGATCTTATACGTGACTTGATCCTTGTTATTCGAGCACGTAGCTATGTCGAAGCGACCCGCAGATATAGTCATTTCAACTCCCGCCTCGAAGGTACGTCGCAGGCTGAACTTCGAGTCCCCAGGAATGAGCCGTGCCACTGTCCCCACTGTCCTCGTCACAAACAGAAGGAGGATGTGGGCCAACAGGCCCATGTACCGAAAGCCCAGGATGTACAGGATGTACAGAAGCCCAGATGTTCCAAAGGGCTGTGA
Protein Sequence MWDPLENEFPDTVHGLRCMLAVKYCQLIEDTYAPDTLGYDLIRDLILVIRARSYVEATRRYSHFNSRLEGTSQAELRVPRNEPCHCPHCPRHKQKEDVGQQAHVPKAQDVQDVQKPRCSKGL

NCBI Accession YP_009506449.1
Location 178-627
Gene Name ac5
Protein Name AC5
Coding Region ATGCAAAACCTCTTCCCTACACGATGGGTCAGCCCATTACCACGAGTGACATCCGAAATACAAATGACCTTGCCTGTATGGGCCACATCATGTCGCTGTTCAAATGACTGGACCTTACATGGGCCTTCACAGCCCTTTGGAACATCTGGGCTTCTGTACATCCTGTACATCCTGGGCTTTCGGTACATGGGCCTGTTGGCCCACATCCTCCTTCTGTTTGTGACGAGGACAGTGGGGACAGTGGCACGGCTCATTCCTGGGGACTCGAAGTTCAGCCTGCGACGTACCTTCGAGGCGGGAGTTGAAATGACTATATCTGCGGGTCGCTTCGACATAGCTACGTGCTCGAATAACAAGGATCAAGTCACGTATAAGATCGTAGCCCAACGTATCTGGAGCGTATGTATCTTCAATAAGTTGACAGTATTTTACGGCCAGCATACACCGTAG
Protein Sequence MQNLFPTRWVSPLPRVTSEIQMTLPVWATSCRCSNDWTLHGPSQPFGTSGLLYILYILGFRYMGLLAHILLLFVTRTVGTVARLIPGDSKFSLRRTFEAGVEMTISAGRFDIATCSNNKDQVTYKIVAQRIWSVCIFNKLTVFYGQHTP

NCBI Accession YP_009506450.1
Location 293-1066
Gene Name av1
Protein Name AV1
Coding Region ATGTCGAAGCGACCCGCAGATATAGTCATTTCAACTCCCGCCTCGAAGGTACGTCGCAGGCTGAACTTCGAGTCCCCAGGAATGAGCCGTGCCACTGTCCCCACTGTCCTCGTCACAAACAGAAGGAGGATGTGGGCCAACAGGCCCATGTACCGAAAGCCCAGGATGTACAGGATGTACAGAAGCCCAGATGTTCCAAAGGGCTGTGAAGGCCCATGTAAGGTCCAGTCATTTGAACAGCGACATGATGTGGCCCATACAGGCAAGGTCATTTGTATTTCGGATGTCACTCGTGGTAATGGGCTGACCCATCGTGTAGGGAAGAGGTTTTGCATTAAGTCCGTTTATGTGTTGGGTAAAATCTGGATGGATGAAAACATCAAGGTTAAAAACCACACCAACACTTGTATGTTCTTTGTTGTTAGGGATAGAAGGCCATATGGCACTCCTATGGATTTTGGTCAGGTGTTCAACATGTATGACAATGAGCCCAGTACAGCCACTGTGAAGAACGATCTCAGGGATCGTTTTCAAGTTCTACGCCGTTTTGCAGGAACTGTGACAGGTGGTCAGTATGCTTCCAAGGAGCAGGCTTTGGTTAGGAAGTTCATGAGGGTCAACAATCATGTGGTGTATAACCATCAAGAAACTGCAAAGTATGAGAACCATACTGAGAATGCGTTGTTGTTGTATATGGCATGTACACATGCAAGTAATCCATTGTATGCAACCATGAAGATCAGGATCTATTTTTATGATTCTGTTCAAAATTAA
Protein Sequence MSKRPADIVISTPASKVRRRLNFESPGMSRATVPTVLVTNRRRMWANRPMYRKPRMYRMYRSPDVPKGCEGPCKVQSFEQRHDVAHTGKVICISDVTRGNGLTHRVGKRFCIKSVYVLGKIWMDENIKVKNHTNTCMFFVVRDRRPYGTPMDFGQVFNMYDNEPSTATVKNDLRDRFQVLRRFAGTVTGGQYASKEQALVRKFMRVNNHVVYNHQETAKYENHTENALLLYMACTHASNPLYATMKIRIYFYDSVQN

NCBI Accession YP_009506451.1
Location 1063-1467
Gene Name ac3
Protein Name AC3
Coding Region ATGGATTCTCGCACAGGGGAGTACATCACTGCAGCTCAAGCAAAGAGTGGCGTGTATACCTGGACGCTCAGAAATCCCCTCTATTTCAAGATAACCAACCACATACACAACACATTCATGACAAACAGAGACATCATAACAGTCCAGGTCCAGTTCAACCACAACCTGAGGAAAGCGTTGGGGATACACCAGTGTTTTCTGACCTGCCAGATCTGGACTCGTTTACATCCTCAGACCTGGCATTTCTTAAGGGTTTTTAAGTATCAATGTATGAAGTATTTAGATAGATTAGGAGTGATTAGTATTAACAATGTAATTAGGGCTTTTTCTCATGTGTTATACGATGTACTTGAGGGCACAATTGATGCTCAATTAGCAAATATAATAAAATTTAACGTTTATTAA
Protein Sequence MDSRTGEYITAAQAKSGVYTWTLRNPLYFKITNHIHNTFMTNRDIITVQVQFNHNLRKALGIHQCFLTCQIWTRLHPQTWHFLRVFKYQCMKYLDRLGVISINNVIRAFSHVLYDVLEGTIDAQLANIIKFNVY

NCBI Accession YP_009506452.1
Location 1208-1615
Gene Name ac2
Protein Name AC2
Coding Region ATGCAGAATTCATCACCCTCACGCAACCATTGTACTCAGGTACCCATCAAGGTCCAACACAAGATATCCAAGCAGAGACCACCACGGAGACGCAGAATTGATCTCCCGTGCGGCTGCTCATACTATCTTGGACTAAACTGCGCATCACATGGATTCTCGCACAGGGGAGTACATCACTGCAGCTCAAGCAAAGAGTGGCGTGTATACCTGGACGCTCAGAAATCCCCTCTATTTCAAGATAACCAACCACATACACAACACATTCATGACAAACAGAGACATCATAACAGTCCAGGTCCAGTTCAACCACAACCTGAGGAAAGCGTTGGGGATACACCAGTGTTTTCTGACCTGCCAGATCTGGACTCGTTTACATCCTCAGACCTGGCATTTCTTAAGGGTTTTTAA
Protein Sequence MQNSSPSRNHCTQVPIKVQHKISKQRPPRRRRIDLPCGCSYYLGLNCASHGFSHRGVHHCSSSKEWRVYLDAQKSPLFQDNQPHTQHIHDKQRHHNSPGPVQPQPEESVGDTPVFSDLPDLDSFTSSDLAFLKGF

NCBI Accession YP_009506453.1
Location 1515-2603
Gene Name ac1
Protein Name AC1
Coding Region ATGGCTCCCCCTAAAAAATTTAAAATAAATGCCAAAAATTATTTTCTCACATACCCTCAGTGTTCACTAACCAAAGAGGAAGCACTTTCCCAATTGCAAAACCTAAATACCCCAACAAACAAAAAATACATTAAGATTTGCAGAGAATTACATGAAGATGGGAGCCCTCATCTCCATGTGCTCATCCAGTTCGAGGGCAAATACCAATGCCAAAATCCACGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTACCATCCAAACATTCAGGGAGCTAAATCAAGCTCGGACGTCAAGTCCTACATCGATAAGGACGGCGACACCCTCGATTGGGGCGAGTTTCAGATCGATGGACGATCTGCAAGAGGGGGACAACAATCAGCCAATGATGCTTACGCCCAGGCGCTTAACACAGGCAGTAAGTCAGAGGCTCTTAATGTAATTAGGGAATTAGCCCCTAAAGATTATGTTTTACAATTCCATAATTTAACTGCCAATTTAGATAGGATTTTTCAAGCTCCTGTAGAAGTATTTGTTAGTCCTTTTTTGTCTTCTTCATTTGATCAAGTTCCAGAGGAACTTGAAGTCTGGGTGTCTGAAAACGTCATGGGTGCCGCTGCGCGGCCATGGAGGCCCAAGAGTATTGTAATAGAGGGTGATAGTCGTACAGGGAAAACCATGTGGGCCAGATCACTAGGCCCACATAATTATTTATGTGGCCACCTAGATCTAAGCCCAAAGGTGTACAGTAATGATGCCTGGTACAACGTCATTGATGACGTCGACCCCCACTATCTAAAGCACTTCAAGGAATTCATGGGGGCCCAGAGGGACTGGCAAAGCAACACGAAGTACGGGAAACCAATTCAAATTAAAGGTGGTATCCCAACAATCTTCCTCTGCAATCCAGGACCCACGTCATCATATAAAGAGTACTTGGACGAGGATAAGAATTCAGCACTCAAAGACTGGTCCATCAAGAATGCAGAATTCATCACCCTCACGCAACCATTGTACTCAGGTACCCATCAAGGTCCAACACAAGATATCCAAGCAGAGACCACCACGGAGACGCAGAATTGA
Protein Sequence MAPPKKFKINAKNYFLTYPQCSLTKEEALSQLQNLNTPTNKKYIKICRELHEDGSPHLHVLIQFEGKYQCQNPRFFDLVSPTRSAHYHPNIQGAKSSSDVKSYIDKDGDTLDWGEFQIDGRSARGGQQSANDAYAQALNTGSKSEALNVIRELAPKDYVLQFHNLTANLDRIFQAPVEVFVSPFLSSSFDQVPEELEVWVSENVMGAAARPWRPKSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEDKNSALKDWSIKNAEFITLTQPLYSGTHQGPTQDIQAETTTETQN

NCBI Accession YP_009506454.1
Location 2156-2452
Gene Name ac4
Protein Name AC4
Coding Region ATGAAGATGGGAGCCCTCATCTCCATGTGCTCATCCAGTTCGAGGGCAAATACCAATGCCAAAATCCACGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTACCATCCAAACATTCAGGGAGCTAAATCAAGCTCGGACGTCAAGTCCTACATCGATAAGGACGGCGACACCCTCGATTGGGGCGAGTTTCAGATCGATGGACGATCTGCAAGAGGGGGACAACAATCAGCCAATGATGCTTACGCCCAGGCGCTTAACACAGGCAGTAAGTCAGAGGCTCTTAATGTAA
Protein Sequence MKMGALISMCSSSSRANTNAKIHDSSTWYPQPGQHITIQTFRELNQARTSSPTSIRTATPSIGASFRSMDDLQEGDNNQPMMLTPRRLTQAVSQRLLM