Pepper yellow leaf curl Indonesia virus 2


Basic Information

Genus Begomovirus
NCBI Assembly GCF_004787615.1
Isolate Indonesia
Release date 2021/6/1
Submitter Jamsari,J., Ferita,I., Noverta,A., Husada,E.D., Herberg,F.W., Nellen,W., Syukriani,L.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_055146
TATTACCGGATGGCCGCGATTTTTTTTAAACGTGGTCCCATAAGCCAACCTTTTGACTGACCAATGGCGTTGCGTCTGAAAAGCTTAGTTAGTGCGTAGCGCACTATAAAGAGAGGGACCACGCTCCACTATCTAAAGATGTGGGATCCGCTTGTGCATCCGTTTCCAGAAACCCTACATGGATTTCGATGCATGTTGGCGATCAAGTATCTGCAAAGCTTAGAGGCTACGTATTCTCCTGATACGGTTGGAGGTGAATTCGTGAAGGATTTGATCTGTTTGCTGCGGTGTAAAAACTATGCCGAAGCGTTCCATCGATACAGTGTCGTCGTTGCCAATGTCTATAACACGCCGGAGACTAAACTACGCGAGTCAGTACAGTCTCCCTGCTGCTGCCCCCACTGCCCCAGGCATGTCTTACAAACGAAGAGCGTGGGTAAATCGGCCTATGAATCGGAAACCCAGATTCTACAGGGGTCGAAGGACCAGTGATGTTCCACGGGGTTGTGAAGGACCTTGTAAGGTCCAATCCTTTGAACAGAGACATGACGTAACACATACTGGGAAGGTCCTCTGTGTTTCGGATGTCACGAGAGGTGGTGGTATTACGCACAGAGTAGGTAAAAGATTCTGTGTGAAATCTGTATATATTATTGGCAAAGTATGGATGGACGAGAACATCAAGTCGAAGAACCACACTAACAACGTCATGTTTTGGCTTGTTCGTGACCGGCGACCAGTTACAACTCCTTATGGCTTCGGTGAGTTGTTCAACATGTATGATAATGAACCCAGCACAGCAACTATCAAGAACGATCTTCGTGATCGTGTTCAGGTGTTACACCGTTTCTCAGCCACGGTGACAGGTGGTCAGTATGCAAGCAAGGAACAAGCAATCGTGAAGAGATTTTTTAGAGTTAACAACTATGTTGTTTACAATCACCAGGAAGCAGCAAAATATGAAAATCACACTGAAAATGCATTGTTATTGTATATGGCATGTACTCATGCATCTAATCCTGTATACGCGACATTGAAAATTCGTATTTACTTCTACGACAATGTAACAAATTAATAAAGCTTGAATTTTATTATGTGCAATTGCTCTGCGTACACAGTCTGTTCAAGTACATCCCACAAAACATAATTCACAGCTCTAATTACATTGTTTATCGACACGACGCCTATATTGGACAGATATCTAAGTACATTGTTCTTAAATACTCTTAAGAAATGCCAAATCTGAGGACGTAAACGAGTCCAGATGTGGAAGATTAAAAAACACTTGTGAATCCCCAGCGCTTTCCTCAGGTTGTGGTTGAACTGGATTTGTACTTCTATGTAGTCCATGTCGGTGTTGTACCCTCTGCTGCTGTGCCTCAGCACCTTGAAATAGAGGGGATTTGGAACCTTCCAAATATAGACGCCATTCTGCGCCTGAGCTGCAGTGATGTACTCCCCGGTGCGAAAATCCATATCCATGACAGTTGATACTGAGGTAATATGAGCAGCCGCAGTCTAAGTCAATACGTCTCCGGCGGATTATTTTCTTCTTCGCAATTTGGTGCAGTATCTTCTGTGGAACTTGAGTAGAGTGGCCCGTTGATGGTGACGAAGGTCGCATTTTTTAGTGCCCAAGATTTCAATGCATTATTTTTGTCCTCGTCAAGGTATTCTTTATATGACGAGGTAGGACCAGGATTGCAGAGGAAGATAGTGGGAATTCCGCCTTTAATTTGAATTGGCTTTCCGTACTTAGTGTTGCTTTGCCAGTTCCTCTGGGCCCCCATAAACTCTTTAAAGTGCTTTAGATAGTGGGGGTCGACGTCATCAATGACGTTGTACCAGGCGTCATTGTTGTATACCTTGGGGCTCAAGTCTAGATGTCCACAGAGATAATTATGGAGGCCCAATGATCGAGCCCACATTGTTTTGCCTGTACGACTCTCCCCCTCTATTACAATACTATTGGGTCTCCATGGCCGCGCAGCGGCATCCCTTACATTTTCAGCAGCCCATGCTTGGAGTTCTTCTGGAACTTGATCAAATGAAGAAGATGAAAAGGGACAAACAAAAACCTCTAGAGGAGGTGCAAAGATCCTATCTAAGTTAGCATTTAAATTATGAAATTGAAAAATATATTCCTTGGGAAGTTTTTCCCTTATTATTGCCATTGCTGCCTGTTTCGAACCTGCGTTCAAGGCTTCAGCAGCTGCATCGTTAGCTGTCTGCTGACCACCTCTAGCAGATCTCCCGTCGATCTGAAATACACCCCAGTCGACGTAATCACCGTCCTTCTCGATGTAGGACTTGACATCGGAGCTGGACTTAGCTCCCTGGAAGTTAGGATGGAATTGTGTGGAGGTGTTGGGGTGTGTAAGATCGAAGTGTCGATTATTTCTGAACTGGGCTTTACCTTTGAATTGTATGAGTACGTGGAGATGCAGAGACCCATCAGAATGTTTCTCTTGCGCGACTCTGATAAATAATTTATCAGAAGGACACTGTATATTTTTAAGAAGCTCAAGTGCTTCTTCTTTGGGAATAGGGCATTTGGGATATGTAAGGAATATGTTTTTGGCTTTTACTTGAAATGAATATGACCGAGGCATGTTTGACTCGTCAATTGGGAGCTCTCAAACTTCTACGGAATGGGGTGCTCTGGGAGCTCATTTATACCGAGCTCCCAAATGGCATAATTGTAATTTGCAGAAGAAATTCAAAATTCAAAAGCGGCCATCCGTATAA

Gene Information

NCBI Accession YP_010084713.1
Location 139-492
Gene Name V1
Protein Name putative precoat protein
Coding Region ATGTGGGATCCGCTTGTGCATCCGTTTCCAGAAACCCTACATGGATTTCGATGCATGTTGGCGATCAAGTATCTGCAAAGCTTAGAGGCTACGTATTCTCCTGATACGGTTGGAGGTGAATTCGTGAAGGATTTGATCTGTTTGCTGCGGTGTAAAAACTATGCCGAAGCGTTCCATCGATACAGTGTCGTCGTTGCCAATGTCTATAACACGCCGGAGACTAAACTACGCGAGTCAGTACAGTCTCCCTGCTGCTGCCCCCACTGCCCCAGGCATGTCTTACAAACGAAGAGCGTGGGTAAATCGGCCTATGAATCGGAAACCCAGATTCTACAGGGGTCGAAGGACCAGTGA
Protein Sequence MWDPLVHPFPETLHGFRCMLAIKYLQSLEATYSPDTVGGEFVKDLICLLRCKNYAEAFHRYSVVVANVYNTPETKLRESVQSPCCCPHCPRHVLQTKSVGKSAYESETQILQGSKDQ

NCBI Accession YP_010084714.1
Location 299-1075
Gene Name V2
Protein Name putative coat protein
Coding Region ATGCCGAAGCGTTCCATCGATACAGTGTCGTCGTTGCCAATGTCTATAACACGCCGGAGACTAAACTACGCGAGTCAGTACAGTCTCCCTGCTGCTGCCCCCACTGCCCCAGGCATGTCTTACAAACGAAGAGCGTGGGTAAATCGGCCTATGAATCGGAAACCCAGATTCTACAGGGGTCGAAGGACCAGTGATGTTCCACGGGGTTGTGAAGGACCTTGTAAGGTCCAATCCTTTGAACAGAGACATGACGTAACACATACTGGGAAGGTCCTCTGTGTTTCGGATGTCACGAGAGGTGGTGGTATTACGCACAGAGTAGGTAAAAGATTCTGTGTGAAATCTGTATATATTATTGGCAAAGTATGGATGGACGAGAACATCAAGTCGAAGAACCACACTAACAACGTCATGTTTTGGCTTGTTCGTGACCGGCGACCAGTTACAACTCCTTATGGCTTCGGTGAGTTGTTCAACATGTATGATAATGAACCCAGCACAGCAACTATCAAGAACGATCTTCGTGATCGTGTTCAGGTGTTACACCGTTTCTCAGCCACGGTGACAGGTGGTCAGTATGCAAGCAAGGAACAAGCAATCGTGAAGAGATTTTTTAGAGTTAACAACTATGTTGTTTACAATCACCAGGAAGCAGCAAAATATGAAAATCACACTGAAAATGCATTGTTATTGTATATGGCATGTACTCATGCATCTAATCCTGTATACGCGACATTGAAAATTCGTATTTACTTCTACGACAATGTAACAAATTAA
Protein Sequence MPKRSIDTVSSLPMSITRRRLNYASQYSLPAAAPTAPGMSYKRRAWVNRPMNRKPRFYRGRRTSDVPRGCEGPCKVQSFEQRHDVTHTGKVLCVSDVTRGGGITHRVGKRFCVKSVYIIGKVWMDENIKSKNHTNNVMFWLVRDRRPVTTPYGFGELFNMYDNEPSTATIKNDLRDRVQVLHRFSATVTGGQYASKEQAIVKRFFRVNNYVVYNHQEAAKYENHTENALLLYMACTHASNPVYATLKIRIYFYDNVTN

NCBI Accession YP_010084715.1
Location 1072-1476
Gene Name C3
Protein Name putative replication enhancer protein
Coding Region ATGGATTTTCGCACCGGGGAGTACATCACTGCAGCTCAGGCGCAGAATGGCGTCTATATTTGGAAGGTTCCAAATCCCCTCTATTTCAAGGTGCTGAGGCACAGCAGCAGAGGGTACAACACCGACATGGACTACATAGAAGTACAAATCCAGTTCAACCACAACCTGAGGAAAGCGCTGGGGATTCACAAGTGTTTTTTAATCTTCCACATCTGGACTCGTTTACGTCCTCAGATTTGGCATTTCTTAAGAGTATTTAAGAACAATGTACTTAGATATCTGTCCAATATAGGCGTCGTGTCGATAAACAATGTAATTAGAGCTGTGAATTATGTTTTGTGGGATGTACTTGAACAGACTGTGTACGCAGAGCAATTGCACATAATAAAATTCAAGCTTTATTAA
Protein Sequence MDFRTGEYITAAQAQNGVYIWKVPNPLYFKVLRHSSRGYNTDMDYIEVQIQFNHNLRKALGIHKCFLIFHIWTRLRPQIWHFLRVFKNNVLRYLSNIGVVSINNVIRAVNYVLWDVLEQTVYAEQLHIIKFKLY

NCBI Accession YP_010084716.1
Location 1217-1624
Gene Name C2
Protein Name putative trans activator protein
Coding Region ATGCGACCTTCGTCACCATCAACGGGCCACTCTACTCAAGTTCCACAGAAGATACTGCACCAAATTGCGAAGAAGAAAATAATCCGCCGGAGACGTATTGACTTAGACTGCGGCTGCTCATATTACCTCAGTATCAACTGTCATGGATATGGATTTTCGCACCGGGGAGTACATCACTGCAGCTCAGGCGCAGAATGGCGTCTATATTTGGAAGGTTCCAAATCCCCTCTATTTCAAGGTGCTGAGGCACAGCAGCAGAGGGTACAACACCGACATGGACTACATAGAAGTACAAATCCAGTTCAACCACAACCTGAGGAAAGCGCTGGGGATTCACAAGTGTTTTTTAATCTTCCACATCTGGACTCGTTTACGTCCTCAGATTTGGCATTTCTTAAGAGTATTTAA
Protein Sequence MRPSSPSTGHSTQVPQKILHQIAKKKIIRRRRIDLDCGCSYYLSINCHGYGFSHRGVHHCSSGAEWRLYLEGSKSPLFQGAEAQQQRVQHRHGLHRSTNPVQPQPEESAGDSQVFFNLPHLDSFTSSDLAFLKSI

NCBI Accession YP_010084717.1
Location 1524-2612
Gene Name C1
Protein Name putative replicase protein
Coding Region ATGCCTCGGTCATATTCATTTCAAGTAAAAGCCAAAAACATATTCCTTACATATCCCAAATGCCCTATTCCCAAAGAAGAAGCACTTGAGCTTCTTAAAAATATACAGTGTCCTTCTGATAAATTATTTATCAGAGTCGCGCAAGAGAAACATTCTGATGGGTCTCTGCATCTCCACGTACTCATACAATTCAAAGGTAAAGCCCAGTTCAGAAATAATCGACACTTCGATCTTACACACCCCAACACCTCCACACAATTCCATCCTAACTTCCAGGGAGCTAAGTCCAGCTCCGATGTCAAGTCCTACATCGAGAAGGACGGTGATTACGTCGACTGGGGTGTATTTCAGATCGACGGGAGATCTGCTAGAGGTGGTCAGCAGACAGCTAACGATGCAGCTGCTGAAGCCTTGAACGCAGGTTCGAAACAGGCAGCAATGGCAATAATAAGGGAAAAACTTCCCAAGGAATATATTTTTCAATTTCATAATTTAAATGCTAACTTAGATAGGATCTTTGCACCTCCTCTAGAGGTTTTTGTTTGTCCCTTTTCATCTTCTTCATTTGATCAAGTTCCAGAAGAACTCCAAGCATGGGCTGCTGAAAATGTAAGGGATGCCGCTGCGCGGCCATGGAGACCCAATAGTATTGTAATAGAGGGGGAGAGTCGTACAGGCAAAACAATGTGGGCTCGATCATTGGGCCTCCATAATTATCTCTGTGGACATCTAGACTTGAGCCCCAAGGTATACAACAATGACGCCTGGTACAACGTCATTGATGACGTCGACCCCCACTATCTAAAGCACTTTAAAGAGTTTATGGGGGCCCAGAGGAACTGGCAAAGCAACACTAAGTACGGAAAGCCAATTCAAATTAAAGGCGGAATTCCCACTATCTTCCTCTGCAATCCTGGTCCTACCTCGTCATATAAAGAATACCTTGACGAGGACAAAAATAATGCATTGAAATCTTGGGCACTAAAAAATGCGACCTTCGTCACCATCAACGGGCCACTCTACTCAAGTTCCACAGAAGATACTGCACCAAATTGCGAAGAAGAAAATAATCCGCCGGAGACGTATTGA
Protein Sequence MPRSYSFQVKAKNIFLTYPKCPIPKEEALELLKNIQCPSDKLFIRVAQEKHSDGSLHLHVLIQFKGKAQFRNNRHFDLTHPNTSTQFHPNFQGAKSSSDVKSYIEKDGDYVDWGVFQIDGRSARGGQQTANDAAAEALNAGSKQAAMAIIREKLPKEYIFQFHNLNANLDRIFAPPLEVFVCPFSSSSFDQVPEELQAWAAENVRDAAARPWRPNSIVIEGESRTGKTMWARSLGLHNYLCGHLDLSPKVYNNDAWYNVIDDVDPHYLKHFKEFMGAQRNWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEDKNNALKSWALKNATFVTINGPLYSSSTEDTAPNCEEENNPPETY