Pepper leaf curl Yunnan virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_000879915.1
Isolate China
Release date 2015/2/22
Submitter Ding,M., Yue,N., Zhang,Z.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_010618
ACCGGATGGCCGCGCGATTTTTTTACAGTGGTCCCCTCCATGTTTGCGTTTGTCCAATGGAATGCGCTCCTCAAAGCTTATTTATGGAATGGTCCCCTATAAAACTTAGCCCCCAAGTATTAACTTTAAACATGTGGGATCCATTGCTTAATGAGTTCCCCGACACCGTACATGGGTTCAGGTGTATGCTTGCAATAAAATACTTGCAGCTTGTAGAAAATACGTATTCGCCGGATACGTTGGGTTACGATCTCATACGGGATCTTATCTTGGTTATACGTGCCAGGGATTATGTCGAAGCGTCCCGCCGATATAGTCATTTCCACACCCGCCTCCAAGGTGCGTCGCCGTCTGAACTTCGACAGCCCTTACACACGTCGTGCTGCTGTCCCCACTGTCCGCGTCACCAGAAGACAAATATGGACCAACAGGCCCATGTATCGAAAACCCACGATGTACCGGATGTACAGAAGCCCTGATGTTCCAAAGGGTTGTGAAGGCCCATGTAAGGTGCAGTCCTATGAGGCCCGTCATGATGTGTCCCATACCGGTAAGGTCATATGTGTCACGGATGTTACACGTGGTAATGGTATTACGCATCGAGTTGGTAAGAGGTTTTGTGTCAAATCCATTTACGTCATTGGGAAGATATGGATGGATGAAAATATTAAATTGAAAAATCACACCAATACAGTTATGTTTTTTTTAGTTAGAGATCGGCGTCCGAGTGGTACTCCGATGGATTTTCAGCAGGTGTTTAATTGTTATGACAACGAGCCAAGCACCGGTACTGTGAAGAATGATATCAGAGACAGGTTTCAAGTGATTCGCAAGTTCAATTATATGGTTACTGGTGGGCAATATGCGTCTAAAGAACAGGCATTAGTGAAGAAATTCATGCGGGTTAATACCCATGTTGTGTATAATCATCAAGAACAGGCGAAGTATGAAAATCATACTGAGAATGCATTATTGTTGTATATGGTGTCTACTCATGCGAGTAATCCTGTATATGCGACTTTGAAAGTCCGCATCTATTTCTATGATTCACAAATGAATTAATAAATATTGAATTTTATATCATGATTTTCAATTACATCTATTGTTCCATTCAATACATCGTATAATACATATCTAAAAGCCCTAATACAATTGTTAATGCTAATCACGCCTAATCTATCTAAATATTTAAGAAATTGGTATTTAAATACTCTTAAGAAACGCGAGGTCTGAGGATGTAAATGAGTCCAGATTTGGCAGGTTAGAAAACATTTGTGTATCCCCAACGCTTTCCTCAGGTTGTAGTTGAATTGGACTTGTAATGTGATGATGTCGTGTTTCCTCAGAAATGGTCTCTCGTGGTGTTTGGTTATCTTGAAATATAGGGGATTTTTGACCGTCCAGATATACACGCCATTCTCTGATTGAGTTGCAGTGAGTAGTTCCCCGGTGCGTGAATCCATGATTGTGACAGCCTAAAGCAACGAAGTATGAACAGCCACAAGGTAGATCAACTCGTCGTCGTCTGGTTGTCTTCTTGGCAATTCTGTGTTGCACCTTGATAGGAACCTGAGTAGAGTGGCCCGTTGAGGGTGACGAATTGTGCATTTTTTAAAGCCCAATCTTTGAGTGCGGAATTCTTTTCCTCTTCTAGATACTCTTTATAGCTGGAATTGGGTCCTGGATTGCAAAGGAAGATAGTTGGAATTCCACCTTTAATTTGAATTGGCTTCCCGTACTTTGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATGAATTCCTTAAAGTGCTTTAGGTAGTGGGGATCGACGTCATCAATGACGTTATACCATGCATCATTCCTGTATACCTTTGGACTGAGATCCAAATGTCCGCACAGATAATTATGTAGTCCTAATGACCTGGCCCACATAGTCTTCCCCGTTCTACTATCACCCTCTATGACTATACTTATCGGTCTTAAAGGCCGCGCAGCGGCATCCCTTACATTATCGGAAACCCATTCTTCAAGTTCTTCTGGAACTTGATCAAACGATGAAGATAAAAAAGGACAACTAAAAATCTCTAATGGAGGTGCAAAAATCCTATCTAAATTGGAATTTAAATTATGAAATTGTAATACATAATCCTTGGGGGCTAATTCTTTAATTACATTAAGAGCCTCTGACTTACTGCTGCTGTTAAGCGCCTTGGCGTAAGCGTCGTTGGCTGATTGCTGTCCCCCTCTTGCAGATCTTGCATCGATTTGAAACTCTCCCCAATCGATGATGTCTCCGTCTTTCTTGATATAGGACTTGACGTCGGAGCTGGATTTAGCTCCCTGAATGTTTGGATGGAAATGTGCTGACCTGGTTGGGGATACCAGGTCGAAGAATCTGTTATTCTGGCATTTGTATTTTCCTTCGAATTGGATAAGCACGTGGAGATGAGGAGACCCATCGTCGTGAAGCTCTCTGCAGATTCTGATATATTTCTTGTTAGTTGGGGTGACTAGGTTTTGTAATTGGGAAAGTGCGTCTTCTTTGGAGAGAGAACACTTGGGATAAGTGATGAAATAGTTTTTAGCATATATTTGGAAACGTTTAGGAGGAGCCATTTGACTGGTCAATCGGTACTCAACAAACTTGGCTATGCAATCGGTGATTGGTACTCAATATATAGTTGAGTACCAAATGGCATAATTGTAATTGCCAAAAGAAATTCAAAATTCAAAATTGAAATCCAAAAGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession YP_001856211.1
Location 132-479
Gene Name AV2
Protein Name AV2 protein
Coding Region ATGTGGGATCCATTGCTTAATGAGTTCCCCGACACCGTACATGGGTTCAGGTGTATGCTTGCAATAAAATACTTGCAGCTTGTAGAAAATACGTATTCGCCGGATACGTTGGGTTACGATCTCATACGGGATCTTATCTTGGTTATACGTGCCAGGGATTATGTCGAAGCGTCCCGCCGATATAGTCATTTCCACACCCGCCTCCAAGGTGCGTCGCCGTCTGAACTTCGACAGCCCTTACACACGTCGTGCTGCTGTCCCCACTGTCCGCGTCACCAGAAGACAAATATGGACCAACAGGCCCATGTATCGAAAACCCACGATGTACCGGATGTACAGAAGCCCTGA
Protein Sequence MWDPLLNEFPDTVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDLILVIRARDYVEASRRYSHFHTRLQGASPSELRQPLHTSCCCPHCPRHQKTNMDQQAHVSKTHDVPDVQKP

NCBI Accession YP_001856212.1
Location 292-1062
Gene Name AV1
Protein Name coat protein
Coding Region ATGTCGAAGCGTCCCGCCGATATAGTCATTTCCACACCCGCCTCCAAGGTGCGTCGCCGTCTGAACTTCGACAGCCCTTACACACGTCGTGCTGCTGTCCCCACTGTCCGCGTCACCAGAAGACAAATATGGACCAACAGGCCCATGTATCGAAAACCCACGATGTACCGGATGTACAGAAGCCCTGATGTTCCAAAGGGTTGTGAAGGCCCATGTAAGGTGCAGTCCTATGAGGCCCGTCATGATGTGTCCCATACCGGTAAGGTCATATGTGTCACGGATGTTACACGTGGTAATGGTATTACGCATCGAGTTGGTAAGAGGTTTTGTGTCAAATCCATTTACGTCATTGGGAAGATATGGATGGATGAAAATATTAAATTGAAAAATCACACCAATACAGTTATGTTTTTTTTAGTTAGAGATCGGCGTCCGAGTGGTACTCCGATGGATTTTCAGCAGGTGTTTAATTGTTATGACAACGAGCCAAGCACCGGTACTGTGAAGAATGATATCAGAGACAGGTTTCAAGTGATTCGCAAGTTCAATTATATGGTTACTGGTGGGCAATATGCGTCTAAAGAACAGGCATTAGTGAAGAAATTCATGCGGGTTAATACCCATGTTGTGTATAATCATCAAGAACAGGCGAAGTATGAAAATCATACTGAGAATGCATTATTGTTGTATATGGTGTCTACTCATGCGAGTAATCCTGTATATGCGACTTTGAAAGTCCGCATCTATTTCTATGATTCACAAATGAATTAA
Protein Sequence MSKRPADIVISTPASKVRRRLNFDSPYTRRAAVPTVRVTRRQIWTNRPMYRKPTMYRMYRSPDVPKGCEGPCKVQSYEARHDVSHTGKVICVTDVTRGNGITHRVGKRFCVKSIYVIGKIWMDENIKLKNHTNTVMFFLVRDRRPSGTPMDFQQVFNCYDNEPSTGTVKNDIRDRFQVIRKFNYMVTGGQYASKEQALVKKFMRVNTHVVYNHQEQAKYENHTENALLLYMVSTHASNPVYATLKVRIYFYDSQMN

NCBI Accession YP_001856213.1
Location 1059-1463
Gene Name AC3
Protein Name AC3 protein
Coding Region ATGGATTCACGCACCGGGGAACTACTCACTGCAACTCAATCAGAGAATGGCGTGTATATCTGGACGGTCAAAAATCCCCTATATTTCAAGATAACCAAACACCACGAGAGACCATTTCTGAGGAAACACGACATCATCACATTACAAGTCCAATTCAACTACAACCTGAGGAAAGCGTTGGGGATACACAAATGTTTTCTAACCTGCCAAATCTGGACTCATTTACATCCTCAGACCTCGCGTTTCTTAAGAGTATTTAAATACCAATTTCTTAAATATTTAGATAGATTAGGCGTGATTAGCATTAACAATTGTATTAGGGCTTTTAGATATGTATTATACGATGTATTGAATGGAACAATAGATGTAATTGAAAATCATGATATAAAATTCAATATTTATTAA
Protein Sequence MDSRTGELLTATQSENGVYIWTVKNPLYFKITKHHERPFLRKHDIITLQVQFNYNLRKALGIHKCFLTCQIWTHLHPQTSRFLRVFKYQFLKYLDRLGVISINNCIRAFRYVLYDVLNGTIDVIENHDIKFNIY

NCBI Accession YP_001856214.1
Location 1204-1608
Gene Name AC2
Protein Name AC2 protein
Coding Region ATGCACAATTCGTCACCCTCAACGGGCCACTCTACTCAGGTTCCTATCAAGGTGCAACACAGAATTGCCAAGAAGACAACCAGACGACGACGAGTTGATCTACCTTGTGGCTGTTCATACTTCGTTGCTTTAGGCTGTCACAATCATGGATTCACGCACCGGGGAACTACTCACTGCAACTCAATCAGAGAATGGCGTGTATATCTGGACGGTCAAAAATCCCCTATATTTCAAGATAACCAAACACCACGAGAGACCATTTCTGAGGAAACACGACATCATCACATTACAAGTCCAATTCAACTACAACCTGAGGAAAGCGTTGGGGATACACAAATGTTTTCTAACCTGCCAAATCTGGACTCATTTACATCCTCAGACCTCGCGTTTCTTAAGAGTATTTAA
Protein Sequence MHNSSPSTGHSTQVPIKVQHRIAKKTTRRRRVDLPCGCSYFVALGCHNHGFTHRGTTHCNSIREWRVYLDGQKSPIFQDNQTPRETISEETRHHHITSPIQLQPEESVGDTQMFSNLPNLDSFTSSDLAFLKSI

NCBI Accession YP_001856215.1
Location 1511-2596
Gene Name AC1
Protein Name Rep protein
Coding Region ATGGCTCCTCCTAAACGTTTCCAAATATATGCTAAAAACTATTTCATCACTTATCCCAAGTGTTCTCTCTCCAAAGAAGACGCACTTTCCCAATTACAAAACCTAGTCACCCCAACTAACAAGAAATATATCAGAATCTGCAGAGAGCTTCACGACGATGGGTCTCCTCATCTCCACGTGCTTATCCAATTCGAAGGAAAATACAAATGCCAGAATAACAGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTATATCAAGAAAGACGGAGACATCATCGATTGGGGAGAGTTTCAAATCGATGCAAGATCTGCAAGAGGGGGACAGCAATCAGCCAACGACGCTTACGCCAAGGCGCTTAACAGCAGCAGTAAGTCAGAGGCTCTTAATGTAATTAAAGAATTAGCCCCCAAGGATTATGTATTACAATTTCATAATTTAAATTCCAATTTAGATAGGATTTTTGCACCTCCATTAGAGATTTTTAGTTGTCCTTTTTTATCTTCATCGTTTGATCAAGTTCCAGAAGAACTTGAAGAATGGGTTTCCGATAATGTAAGGGATGCCGCTGCGCGGCCTTTAAGACCGATAAGTATAGTCATAGAGGGTGATAGTAGAACGGGGAAGACTATGTGGGCCAGGTCATTAGGACTACATAATTATCTGTGCGGACATTTGGATCTCAGTCCAAAGGTATACAGGAATGATGCATGGTATAACGTCATTGATGACGTCGATCCCCACTACCTAAAGCACTTTAAGGAATTCATGGGGGCCCAAAGGGACTGGCAAAGCAACACAAAGTACGGGAAGCCAATTCAAATTAAAGGTGGAATTCCAACTATCTTCCTTTGCAATCCAGGACCCAATTCCAGCTATAAAGAGTATCTAGAAGAGGAAAAGAATTCCGCACTCAAAGATTGGGCTTTAAAAAATGCACAATTCGTCACCCTCAACGGGCCACTCTACTCAGGTTCCTATCAAGGTGCAACACAGAATTGCCAAGAAGACAACCAGACGACGACGAGTTGA
Protein Sequence MAPPKRFQIYAKNYFITYPKCSLSKEDALSQLQNLVTPTNKKYIRICRELHDDGSPHLHVLIQFEGKYKCQNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYIKKDGDIIDWGEFQIDARSARGGQQSANDAYAKALNSSSKSEALNVIKELAPKDYVLQFHNLNSNLDRIFAPPLEIFSCPFLSSSFDQVPEELEEWVSDNVRDAAARPLRPISIVIEGDSRTGKTMWARSLGLHNYLCGHLDLSPKVYRNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPNSSYKEYLEEEKNSALKDWALKNAQFVTLNGPLYSGSYQGATQNCQEDNQTTTS

NCBI Accession YP_001856216.1
Location 2149-2439
Gene Name AC4
Protein Name AC4 protein
Coding Region ATGGGTCTCCTCATCTCCACGTGCTTATCCAATTCGAAGGAAAATACAAATGCCAGAATAACAGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTATATCAAGAAAGACGGAGACATCATCGATTGGGGAGAGTTTCAAATCGATGCAAGATCTGCAAGAGGGGGACAGCAATCAGCCAACGACGCTTACGCCAAGGCGCTTAACAGCAGCAGTAAGTCAGAGGCTCTTAATGTAA
Protein Sequence MGLLISTCLSNSKENTNARITDSSTWYPQPGQHISIQTFRELNPAPTSSPISRKTETSSIGESFKSMQDLQEGDSNQPTTLTPRRLTAAVSQRLLM