Pepper leaf curl Yunnan virus
Basic Information
Genus |
Begomovirus
|
NCBI Assembly |
GCF_000879915.1 |
Isolate |
China |
Release date |
2015/2/22 |
Submitter |
Ding,M., Yue,N., Zhang,Z. |
Host |
|
Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCGCGATTTTTTTACAGTGGTCCCCTCCATGTTTGCGTTTGTCCAATGGAATGCGCTCCTCAAAGCTTATTTATGGAATGGTCCCCTATAAAACTTAGCCCCCAAGTATTAACTTTAAACATGTGGGATCCATTGCTTAATGAGTTCCCCGACACCGTACATGGGTTCAGGTGTATGCTTGCAATAAAATACTTGCAGCTTGTAGAAAATACGTATTCGCCGGATACGTTGGGTTACGATCTCATACGGGATCTTATCTTGGTTATACGTGCCAGGGATTATGTCGAAGCGTCCCGCCGATATAGTCATTTCCACACCCGCCTCCAAGGTGCGTCGCCGTCTGAACTTCGACAGCCCTTACACACGTCGTGCTGCTGTCCCCACTGTCCGCGTCACCAGAAGACAAATATGGACCAACAGGCCCATGTATCGAAAACCCACGATGTACCGGATGTACAGAAGCCCTGATGTTCCAAAGGGTTGTGAAGGCCCATGTAAGGTGCAGTCCTATGAGGCCCGTCATGATGTGTCCCATACCGGTAAGGTCATATGTGTCACGGATGTTACACGTGGTAATGGTATTACGCATCGAGTTGGTAAGAGGTTTTGTGTCAAATCCATTTACGTCATTGGGAAGATATGGATGGATGAAAATATTAAATTGAAAAATCACACCAATACAGTTATGTTTTTTTTAGTTAGAGATCGGCGTCCGAGTGGTACTCCGATGGATTTTCAGCAGGTGTTTAATTGTTATGACAACGAGCCAAGCACCGGTACTGTGAAGAATGATATCAGAGACAGGTTTCAAGTGATTCGCAAGTTCAATTATATGGTTACTGGTGGGCAATATGCGTCTAAAGAACAGGCATTAGTGAAGAAATTCATGCGGGTTAATACCCATGTTGTGTATAATCATCAAGAACAGGCGAAGTATGAAAATCATACTGAGAATGCATTATTGTTGTATATGGTGTCTACTCATGCGAGTAATCCTGTATATGCGACTTTGAAAGTCCGCATCTATTTCTATGATTCACAAATGAATTAATAAATATTGAATTTTATATCATGATTTTCAATTACATCTATTGTTCCATTCAATACATCGTATAATACATATCTAAAAGCCCTAATACAATTGTTAATGCTAATCACGCCTAATCTATCTAAATATTTAAGAAATTGGTATTTAAATACTCTTAAGAAACGCGAGGTCTGAGGATGTAAATGAGTCCAGATTTGGCAGGTTAGAAAACATTTGTGTATCCCCAACGCTTTCCTCAGGTTGTAGTTGAATTGGACTTGTAATGTGATGATGTCGTGTTTCCTCAGAAATGGTCTCTCGTGGTGTTTGGTTATCTTGAAATATAGGGGATTTTTGACCGTCCAGATATACACGCCATTCTCTGATTGAGTTGCAGTGAGTAGTTCCCCGGTGCGTGAATCCATGATTGTGACAGCCTAAAGCAACGAAGTATGAACAGCCACAAGGTAGATCAACTCGTCGTCGTCTGGTTGTCTTCTTGGCAATTCTGTGTTGCACCTTGATAGGAACCTGAGTAGAGTGGCCCGTTGAGGGTGACGAATTGTGCATTTTTTAAAGCCCAATCTTTGAGTGCGGAATTCTTTTCCTCTTCTAGATACTCTTTATAGCTGGAATTGGGTCCTGGATTGCAAAGGAAGATAGTTGGAATTCCACCTTTAATTTGAATTGGCTTCCCGTACTTTGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATGAATTCCTTAAAGTGCTTTAGGTAGTGGGGATCGACGTCATCAATGACGTTATACCATGCATCATTCCTGTATACCTTTGGACTGAGATCCAAATGTCCGCACAGATAATTATGTAGTCCTAATGACCTGGCCCACATAGTCTTCCCCGTTCTACTATCACCCTCTATGACTATACTTATCGGTCTTAAAGGCCGCGCAGCGGCATCCCTTACATTATCGGAAACCCATTCTTCAAGTTCTTCTGGAACTTGATCAAACGATGAAGATAAAAAAGGACAACTAAAAATCTCTAATGGAGGTGCAAAAATCCTATCTAAATTGGAATTTAAATTATGAAATTGTAATACATAATCCTTGGGGGCTAATTCTTTAATTACATTAAGAGCCTCTGACTTACTGCTGCTGTTAAGCGCCTTGGCGTAAGCGTCGTTGGCTGATTGCTGTCCCCCTCTTGCAGATCTTGCATCGATTTGAAACTCTCCCCAATCGATGATGTCTCCGTCTTTCTTGATATAGGACTTGACGTCGGAGCTGGATTTAGCTCCCTGAATGTTTGGATGGAAATGTGCTGACCTGGTTGGGGATACCAGGTCGAAGAATCTGTTATTCTGGCATTTGTATTTTCCTTCGAATTGGATAAGCACGTGGAGATGAGGAGACCCATCGTCGTGAAGCTCTCTGCAGATTCTGATATATTTCTTGTTAGTTGGGGTGACTAGGTTTTGTAATTGGGAAAGTGCGTCTTCTTTGGAGAGAGAACACTTGGGATAAGTGATGAAATAGTTTTTAGCATATATTTGGAAACGTTTAGGAGGAGCCATTTGACTGGTCAATCGGTACTCAACAAACTTGGCTATGCAATCGGTGATTGGTACTCAATATATAGTTGAGTACCAAATGGCATAATTGTAATTGCCAAAAGAAATTCAAAATTCAAAATTGAAATCCAAAAGCGGCCATCCGTATAATATT
Gene Information
NCBI Accession
|
YP_001856211.1
|
Location
|
132-479 |
Gene Name
|
AV2 |
Protein Name
|
AV2 protein |
Coding Region
|
ATGTGGGATCCATTGCTTAATGAGTTCCCCGACACCGTACATGGGTTCAGGTGTATGCTTGCAATAAAATACTTGCAGCTTGTAGAAAATACGTATTCGCCGGATACGTTGGGTTACGATCTCATACGGGATCTTATCTTGGTTATACGTGCCAGGGATTATGTCGAAGCGTCCCGCCGATATAGTCATTTCCACACCCGCCTCCAAGGTGCGTCGCCGTCTGAACTTCGACAGCCCTTACACACGTCGTGCTGCTGTCCCCACTGTCCGCGTCACCAGAAGACAAATATGGACCAACAGGCCCATGTATCGAAAACCCACGATGTACCGGATGTACAGAAGCCCTGA |
Protein Sequence
|
MWDPLLNEFPDTVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDLILVIRARDYVEASRRYSHFHTRLQGASPSELRQPLHTSCCCPHCPRHQKTNMDQQAHVSKTHDVPDVQKP |
NCBI Accession
|
YP_001856212.1
|
Location
|
292-1062 |
Gene Name
|
AV1 |
Protein Name
|
coat protein |
Coding Region
|
ATGTCGAAGCGTCCCGCCGATATAGTCATTTCCACACCCGCCTCCAAGGTGCGTCGCCGTCTGAACTTCGACAGCCCTTACACACGTCGTGCTGCTGTCCCCACTGTCCGCGTCACCAGAAGACAAATATGGACCAACAGGCCCATGTATCGAAAACCCACGATGTACCGGATGTACAGAAGCCCTGATGTTCCAAAGGGTTGTGAAGGCCCATGTAAGGTGCAGTCCTATGAGGCCCGTCATGATGTGTCCCATACCGGTAAGGTCATATGTGTCACGGATGTTACACGTGGTAATGGTATTACGCATCGAGTTGGTAAGAGGTTTTGTGTCAAATCCATTTACGTCATTGGGAAGATATGGATGGATGAAAATATTAAATTGAAAAATCACACCAATACAGTTATGTTTTTTTTAGTTAGAGATCGGCGTCCGAGTGGTACTCCGATGGATTTTCAGCAGGTGTTTAATTGTTATGACAACGAGCCAAGCACCGGTACTGTGAAGAATGATATCAGAGACAGGTTTCAAGTGATTCGCAAGTTCAATTATATGGTTACTGGTGGGCAATATGCGTCTAAAGAACAGGCATTAGTGAAGAAATTCATGCGGGTTAATACCCATGTTGTGTATAATCATCAAGAACAGGCGAAGTATGAAAATCATACTGAGAATGCATTATTGTTGTATATGGTGTCTACTCATGCGAGTAATCCTGTATATGCGACTTTGAAAGTCCGCATCTATTTCTATGATTCACAAATGAATTAA |
Protein Sequence
|
MSKRPADIVISTPASKVRRRLNFDSPYTRRAAVPTVRVTRRQIWTNRPMYRKPTMYRMYRSPDVPKGCEGPCKVQSYEARHDVSHTGKVICVTDVTRGNGITHRVGKRFCVKSIYVIGKIWMDENIKLKNHTNTVMFFLVRDRRPSGTPMDFQQVFNCYDNEPSTGTVKNDIRDRFQVIRKFNYMVTGGQYASKEQALVKKFMRVNTHVVYNHQEQAKYENHTENALLLYMVSTHASNPVYATLKVRIYFYDSQMN |
NCBI Accession
|
YP_001856213.1
|
Location
|
1059-1463 |
Gene Name
|
AC3 |
Protein Name
|
AC3 protein |
Coding Region
|
ATGGATTCACGCACCGGGGAACTACTCACTGCAACTCAATCAGAGAATGGCGTGTATATCTGGACGGTCAAAAATCCCCTATATTTCAAGATAACCAAACACCACGAGAGACCATTTCTGAGGAAACACGACATCATCACATTACAAGTCCAATTCAACTACAACCTGAGGAAAGCGTTGGGGATACACAAATGTTTTCTAACCTGCCAAATCTGGACTCATTTACATCCTCAGACCTCGCGTTTCTTAAGAGTATTTAAATACCAATTTCTTAAATATTTAGATAGATTAGGCGTGATTAGCATTAACAATTGTATTAGGGCTTTTAGATATGTATTATACGATGTATTGAATGGAACAATAGATGTAATTGAAAATCATGATATAAAATTCAATATTTATTAA |
Protein Sequence
|
MDSRTGELLTATQSENGVYIWTVKNPLYFKITKHHERPFLRKHDIITLQVQFNYNLRKALGIHKCFLTCQIWTHLHPQTSRFLRVFKYQFLKYLDRLGVISINNCIRAFRYVLYDVLNGTIDVIENHDIKFNIY |
NCBI Accession
|
YP_001856214.1
|
Location
|
1204-1608 |
Gene Name
|
AC2 |
Protein Name
|
AC2 protein |
Coding Region
|
ATGCACAATTCGTCACCCTCAACGGGCCACTCTACTCAGGTTCCTATCAAGGTGCAACACAGAATTGCCAAGAAGACAACCAGACGACGACGAGTTGATCTACCTTGTGGCTGTTCATACTTCGTTGCTTTAGGCTGTCACAATCATGGATTCACGCACCGGGGAACTACTCACTGCAACTCAATCAGAGAATGGCGTGTATATCTGGACGGTCAAAAATCCCCTATATTTCAAGATAACCAAACACCACGAGAGACCATTTCTGAGGAAACACGACATCATCACATTACAAGTCCAATTCAACTACAACCTGAGGAAAGCGTTGGGGATACACAAATGTTTTCTAACCTGCCAAATCTGGACTCATTTACATCCTCAGACCTCGCGTTTCTTAAGAGTATTTAA |
Protein Sequence
|
MHNSSPSTGHSTQVPIKVQHRIAKKTTRRRRVDLPCGCSYFVALGCHNHGFTHRGTTHCNSIREWRVYLDGQKSPIFQDNQTPRETISEETRHHHITSPIQLQPEESVGDTQMFSNLPNLDSFTSSDLAFLKSI |
NCBI Accession
|
YP_001856215.1
|
Location
|
1511-2596 |
Gene Name
|
AC1 |
Protein Name
|
Rep protein |
Coding Region
|
ATGGCTCCTCCTAAACGTTTCCAAATATATGCTAAAAACTATTTCATCACTTATCCCAAGTGTTCTCTCTCCAAAGAAGACGCACTTTCCCAATTACAAAACCTAGTCACCCCAACTAACAAGAAATATATCAGAATCTGCAGAGAGCTTCACGACGATGGGTCTCCTCATCTCCACGTGCTTATCCAATTCGAAGGAAAATACAAATGCCAGAATAACAGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTATATCAAGAAAGACGGAGACATCATCGATTGGGGAGAGTTTCAAATCGATGCAAGATCTGCAAGAGGGGGACAGCAATCAGCCAACGACGCTTACGCCAAGGCGCTTAACAGCAGCAGTAAGTCAGAGGCTCTTAATGTAATTAAAGAATTAGCCCCCAAGGATTATGTATTACAATTTCATAATTTAAATTCCAATTTAGATAGGATTTTTGCACCTCCATTAGAGATTTTTAGTTGTCCTTTTTTATCTTCATCGTTTGATCAAGTTCCAGAAGAACTTGAAGAATGGGTTTCCGATAATGTAAGGGATGCCGCTGCGCGGCCTTTAAGACCGATAAGTATAGTCATAGAGGGTGATAGTAGAACGGGGAAGACTATGTGGGCCAGGTCATTAGGACTACATAATTATCTGTGCGGACATTTGGATCTCAGTCCAAAGGTATACAGGAATGATGCATGGTATAACGTCATTGATGACGTCGATCCCCACTACCTAAAGCACTTTAAGGAATTCATGGGGGCCCAAAGGGACTGGCAAAGCAACACAAAGTACGGGAAGCCAATTCAAATTAAAGGTGGAATTCCAACTATCTTCCTTTGCAATCCAGGACCCAATTCCAGCTATAAAGAGTATCTAGAAGAGGAAAAGAATTCCGCACTCAAAGATTGGGCTTTAAAAAATGCACAATTCGTCACCCTCAACGGGCCACTCTACTCAGGTTCCTATCAAGGTGCAACACAGAATTGCCAAGAAGACAACCAGACGACGACGAGTTGA |
Protein Sequence
|
MAPPKRFQIYAKNYFITYPKCSLSKEDALSQLQNLVTPTNKKYIRICRELHDDGSPHLHVLIQFEGKYKCQNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYIKKDGDIIDWGEFQIDARSARGGQQSANDAYAKALNSSSKSEALNVIKELAPKDYVLQFHNLNSNLDRIFAPPLEIFSCPFLSSSFDQVPEELEEWVSDNVRDAAARPLRPISIVIEGDSRTGKTMWARSLGLHNYLCGHLDLSPKVYRNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPNSSYKEYLEEEKNSALKDWALKNAQFVTLNGPLYSGSYQGATQNCQEDNQTTTS |
NCBI Accession
|
YP_001856216.1
|
Location
|
2149-2439 |
Gene Name
|
AC4 |
Protein Name
|
AC4 protein |
Coding Region
|
ATGGGTCTCCTCATCTCCACGTGCTTATCCAATTCGAAGGAAAATACAAATGCCAGAATAACAGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTATATCAAGAAAGACGGAGACATCATCGATTGGGGAGAGTTTCAAATCGATGCAAGATCTGCAAGAGGGGGACAGCAATCAGCCAACGACGCTTACGCCAAGGCGCTTAACAGCAGCAGTAAGTCAGAGGCTCTTAATGTAA |
Protein Sequence
|
MGLLISTCLSNSKENTNARITDSSTWYPQPGQHISIQTFRELNPAPTSSPISRKTETSSIGESFKSMQDLQEGDSNQPTTLTPRRLTAAVSQRLLM |