Papaya leaf curl China virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_000846865.1
Isolate China:Guangxi
Release date 2015/2/12
Submitter Wang,X., Xie,Y., Zhou,X.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_005321
ACCGGATGGCCGCGATTTTTTTTAAAGTGGTCCCCGCATGCGCTGGTGTCCAATCCTATCCGCTCCTCAAAGCTTAATTATTAAGTGGTCCCCTATATAACTTGGTCCCCAAGTACTAAAGCTAAACATGTGGGATCCTTTACTAAACGAGTTTCCCGAGACCGTACATGGTTTCAGGTGTATGCTAGCAATTAAGTATTTGCAACTGGTAGAAAATACGTACTCTCCAGATACATTAGGGCACGACTTAATTCGTGATTTAATTTCAGTTATTCGTGCTAGAGATTATGTCGAAGCGACCCGCCGATATAGTCATTTCCACACCCGCATCCAAGGTGCGTCGCCGGCTGAATTTCGACAGCCCGTATGTCAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACAAACAAAAGGAGGTCATGGGTGAATCGGCCCATGTACCGAAAGCCCAGGATGTACAGGATGTACAAAAGCCCTGATGTGCCTCGTGGTTGTGAGGGTCCATGTAAGGTCCAGTCGTATGAACAGCGTCATGATGTAGCACACGTAGGTAAGGTAATTTGTGTGTCGGATGTTACCCGTGGTAATGGTTTGACTCATCGAGTCGGGAAGAGGTTTTGTGTTAAATCAGTCTATGTTTTGGGCAAGATATGGATGGATGAGAACATTAAGACCAAGAATCATACCAACACAGTCATGTTTTTTCTAGTTCGTGATAGGAGACCATTTGGCACTCCACAGGATTTTGGCCAGGTGTTTAACATGTATGATAATGAGCCTAGCACTGCTACTGTGAAGAACGACAACAGGGATCGCTTTCAAGTTCTACGGCGTTTTCAGGCGACTGTTACGGGTGGTCAGTATGCAAGTAAGGAGCAAGCAATAGTTAGGAAATTTATGAAGGTTAACAACCATGTGACTTATAACCATCAAGAGGCTGCGAAGTATGATAACCACACAGAGAATGCTTTGTTATTGTATATGGCATGTACTCATGCTAGTAATCCAGTGTATGCTACTTTGAAGATCAGGATCTATTTCTATGATTCTGTTCAGAATTAATAAAGATTGAATTTTATTATATGAGAATGTGTTACATATTCTGTTTTCTCCAATACATCCCATAATACATGATTACATGCTCTAATTACATTGTTAATACTAATTACACCCATATTATCTAAATATTTCATACATTGAACCCTAAATACTCTTAAGAAACGCCAAGTCTGAGGTTGTAAGCGAGTCCAGATCTGGAAGATCAGAAAACACTGGTGTATTCCCAATGCTTTCCTCAGGTTGTGGTTGAATTGTATTTGGATCGTTATGATGYCGTGGTTGGTGTTGAATGGTCTCTCGTGGTGCTTGGTTATCTTGAAATATAGGGGATTTTTGATCGTCCAGGTATACACGCCACTCTCGCATTGAGTTGCAGTGAGTAATTCCCCTGTGCGAAAATCCATGATTTGCACAATCTATGCCGAAGTAGTATGAGCACCCGCACGTTAGATCAACTCTCCGTCTCCGAATGGGCCTCCTCTTGGCTATTCTGTGTTGCACTTTGATTGGTACCTGAGTACAATGGGCTGTTGAGGGTGATGAATTCCGCATTCTTTAATGCCCAATCTTTTAATGCTGAATTTTTATCCTCATTCAAGTACTCTTTATATGATGATGTTGGGCCTGGATTGCATAGGAAGATAGTTGGGATTCCACCTTTAATTTGAATGGCTTTCCCGTACTTAGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATGAATTCTTTAAAGTGCTTTAGATAGTGGGGGTCTACGTCATCAATGACGTTATACCAAGCATCATTACTGTATACTTTTGGGCTTAGATCAAGATGTCCACACAAATAATTGTGTGGTCCCAGTGATCTGGCCCACATTGTTTTACCCGTACGACTATCACCTTCTATCACAATACTCTTGGGTCTCCACGGCCGCGCAGCGGCACCACTCACGTTCTCAGAAACCCACTCTTCAAGTTCTTCTGGAACTTGATCGAATGAAGAAGAAAGAAAAGGACAAACAAAAACCTCTATAGGAGGTGCAAAAATCCTATCTAAATTACTATTTAAATTATGAAACTGTAAAACGAAATCTTTAGGAGCCTTCTCCTTTAATATATTGAGGGCCGCTGGTTTGGACCTTGCATTGATTGCCTCGGCATATGCGTCGTTGGCAGATTGGCAACCTCCTCTAGCTGATCTTCCATCGATTTGGAAAACTCCATGATCAAGCACGTCTCCGTCTTTTTCCATGTATGCTTTAACATCTGTTGAGGTTTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCTGCTTGGGGAGGTGAGATCGAAGAATCTGTTGTTTTGGCACTTGAATTTGCCTCCGAACTGTATGAGGACATGCAGGTGAGGAGACCCATCTCCGTGTAGTTCCCTGCAAATACGTATGAATAATTTATTAGTCGGGGTTGATAAGGCTGAGATTTGGGAAAATGCCTCTTCTTTAGTAAGGGAGCAGTGTGGATAAGTGAGGGAATAATTCTTGGCATTTATTAAAAATTTTTTTGGCTGAGGCATATTGACTGGTCAATCGGGTCCTCTCAAACTTGGCTATGCAATCGGGGAATGGGTCCTTATTTATAGTTCAGGACCTAAATGGCATTATTGTAATTCCCAAAAGAAATTCAAAATTTGAATTTTGAATCCAAAAGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession NP_955743.1
Location 128-478
Gene Name AV2
Protein Name AV2 protein
Coding Region ATGTGGGATCCTTTACTAAACGAGTTTCCCGAGACCGTACATGGTTTCAGGTGTATGCTAGCAATTAAGTATTTGCAACTGGTAGAAAATACGTACTCTCCAGATACATTAGGGCACGACTTAATTCGTGATTTAATTTCAGTTATTCGTGCTAGAGATTATGTCGAAGCGACCCGCCGATATAGTCATTTCCACACCCGCATCCAAGGTGCGTCGCCGGCTGAATTTCGACAGCCCGTATGTCAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACAAACAAAAGGAGGTCATGGGTGAATCGGCCCATGTACCGAAAGCCCAGGATGTACAGGATGTACAAAAGCCCTGA
Protein Sequence MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGHDLIRDLISVIRARDYVEATRRYSHFHTRIQGASPAEFRQPVCQPCCCPHCPRHKQKEVMGESAHVPKAQDVQDVQKP

NCBI Accession NP_955744.1
Location 288-1061
Gene Name AV1
Protein Name AV1 protein
Coding Region ATGTCGAAGCGACCCGCCGATATAGTCATTTCCACACCCGCATCCAAGGTGCGTCGCCGGCTGAATTTCGACAGCCCGTATGTCAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACAAACAAAAGGAGGTCATGGGTGAATCGGCCCATGTACCGAAAGCCCAGGATGTACAGGATGTACAAAAGCCCTGATGTGCCTCGTGGTTGTGAGGGTCCATGTAAGGTCCAGTCGTATGAACAGCGTCATGATGTAGCACACGTAGGTAAGGTAATTTGTGTGTCGGATGTTACCCGTGGTAATGGTTTGACTCATCGAGTCGGGAAGAGGTTTTGTGTTAAATCAGTCTATGTTTTGGGCAAGATATGGATGGATGAGAACATTAAGACCAAGAATCATACCAACACAGTCATGTTTTTTCTAGTTCGTGATAGGAGACCATTTGGCACTCCACAGGATTTTGGCCAGGTGTTTAACATGTATGATAATGAGCCTAGCACTGCTACTGTGAAGAACGACAACAGGGATCGCTTTCAAGTTCTACGGCGTTTTCAGGCGACTGTTACGGGTGGTCAGTATGCAAGTAAGGAGCAAGCAATAGTTAGGAAATTTATGAAGGTTAACAACCATGTGACTTATAACCATCAAGAGGCTGCGAAGTATGATAACCACACAGAGAATGCTTTGTTATTGTATATGGCATGTACTCATGCTAGTAATCCAGTGTATGCTACTTTGAAGATCAGGATCTATTTCTATGATTCTGTTCAGAATTAA
Protein Sequence MSKRPADIVISTPASKVRRRLNFDSPYVSRAAAPTVLVTNKRRSWVNRPMYRKPRMYRMYKSPDVPRGCEGPCKVQSYEQRHDVAHVGKVICVSDVTRGNGLTHRVGKRFCVKSVYVLGKIWMDENIKTKNHTNTVMFFLVRDRRPFGTPQDFGQVFNMYDNEPSTATVKNDNRDRFQVLRRFQATVTGGQYASKEQAIVRKFMKVNNHVTYNHQEAAKYDNHTENALLLYMACTHASNPVYATLKIRIYFYDSVQN

NCBI Accession NP_955745.1
Location 1058-1462
Gene Name AC3
Protein Name AC3 protein
Coding Region ATGGATTTTCGCACAGGGGAATTACTCACTGCAACTCAATGCGAGAGTGGCGTGTATACCTGGACGATCAAAAATCCCCTATATTTCAAGATAACCAAGCACCACGAGAGACCATTCAACACCAACCACGRCATCATAACGATCCAAATACAATTCAACCACAACCTGAGGAAAGCATTGGGAATACACCAGTGTTTTCTGATCTTCCAGATCTGGACTCGCTTACAACCTCAGACTTGGCGTTTCTTAAGAGTATTTAGGGTTCAATGTATGAAATATTTAGATAATATGGGTGTAATTAGTATTAACAATGTAATTAGAGCATGTAATCATGTATTATGGGATGTATTGGAGAAAACAGAATATGTAACACATTCTCATATAATAAAATTCAATCTTTATTAA
Protein Sequence MDFRTGELLTATQCESGVYTWTIKNPLYFKITKHHERPFNTNHXIITIQIQFNHNLRKALGIHQCFLIFQIWTRLQPQTWRFLRVFRVQCMKYLDNMGVISINNVIRACNHVLWDVLEKTEYVTHSHIIKFNLY

NCBI Accession NP_955746.1
Location 1203-1610
Gene Name AC2
Protein Name AC2 protein
Coding Region ATGCGGAATTCATCACCCTCAACAGCCCATTGTACTCAGGTACCAATCAAAGTGCAACACAGAATAGCCAAGAGGAGGCCCATTCGGAGACGGAGAGTTGATCTAACGTGCGGGTGCTCATACTACTTCGGCATAGATTGTGCAAATCATGGATTTTCGCACAGGGGAATTACTCACTGCAACTCAATGCGAGAGTGGCGTGTATACCTGGACGATCAAAAATCCCCTATATTTCAAGATAACCAAGCACCACGAGAGACCATTCAACACCAACCACGRCATCATAACGATCCAAATACAATTCAACCACAACCTGAGGAAAGCATTGGGAATACACCAGTGTTTTCTGATCTTCCAGATCTGGACTCGCTTACAACCTCAGACTTGGCGTTTCTTAAGAGTATTTAG
Protein Sequence MRNSSPSTAHCTQVPIKVQHRIAKRRPIRRRRVDLTCGCSYYFGIDCANHGFSHRGITHCNSMREWRVYLDDQKSPIFQDNQAPRETIQHQPRHHNDPNTIQPQPEESIGNTPVFSDLPDLDSLTTSDLAFLKSI

NCBI Accession NP_955747.1
Location 1510-2598
Gene Name AC1
Protein Name AC1 protein
Coding Region ATGCCTCAGCCAAAAAAATTTTTAATAAATGCCAAGAATTATTCCCTCACTTATCCACACTGCTCCCTTACTAAAGAAGAGGCATTTTCCCAAATCTCAGCCTTATCAACCCCGACTAATAAATTATTCATACGTATTTGCAGGGAACTACACGGAGATGGGTCTCCTCACCTGCATGTCCTCATACAGTTCGGAGGCAAATTCAAGTGCCAAAACAACAGATTCTTCGATCTCACCTCCCCAAGCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAAACCTCAACAGATGTTAAAGCATACATGGAAAAAGACGGAGACGTGCTTGATCATGGAGTTTTCCAAATCGATGGAAGATCAGCTAGAGGAGGTTGCCAATCTGCCAACGACGCATATGCCGAGGCAATCAATGCAAGGTCCAAACCAGCGGCCCTCAATATATTAAAGGAGAAGGCTCCTAAAGATTTCGTTTTACAGTTTCATAATTTAAATAGTAATTTAGATAGGATTTTTGCACCTCCTATAGAGGTTTTTGTTTGTCCTTTTCTTTCTTCTTCATTCGATCAAGTTCCAGAAGAACTTGAAGAGTGGGTTTCTGAGAACGTGAGTGGTGCCGCTGCGCGGCCGTGGAGACCCAAGAGTATTGTGATAGAAGGTGATAGTCGTACGGGTAAAACAATGTGGGCCAGATCACTGGGACCACACAATTATTTGTGTGGACATCTTGATCTAAGCCCAAAAGTATACAGTAATGATGCTTGGTATAACGTCATTGATGACGTAGACCCCCACTATCTAAAGCACTTTAAAGAATTCATGGGGGCCCAAAGGGACTGGCAAAGCAACACTAAGTACGGGAAAGCCATTCAAATTAAAGGTGGAATCCCAACTATCTTCCTATGCAATCCAGGCCCAACATCATCATATAAAGAGTACTTGAATGAGGATAAAAATTCAGCATTAAAAGATTGGGCATTAAAGAATGCGGAATTCATCACCCTCAACAGCCCATTGTACTCAGGTACCAATCAAAGTGCAACACAGAATAGCCAAGAGGAGGCCCATTCGGAGACGGAGAGTTGA
Protein Sequence MPQPKKFLINAKNYSLTYPHCSLTKEEAFSQISALSTPTNKLFIRICRELHGDGSPHLHVLIQFGGKFKCQNNRFFDLTSPSRSAHFHPNIQGAKTSTDVKAYMEKDGDVLDHGVFQIDGRSARGGCQSANDAYAEAINARSKPAALNILKEKAPKDFVLQFHNLNSNLDRIFAPPIEVFVCPFLSSSFDQVPEELEEWVSENVSGAAARPWRPKSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKAIQIKGGIPTIFLCNPGPTSSYKEYLNEDKNSALKDWALKNAEFITLNSPLYSGTNQSATQNSQEEAHSETES

NCBI Accession NP_955748.1
Location 2148-2441
Gene Name AC4
Protein Name AC4 protein
Coding Region ATGGGTCTCCTCACCTGCATGTCCTCATACAGTTCGGAGGCAAATTCAAGTGCCAAAACAACAGATTCTTCGATCTCACCTCCCCAAGCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAAACCTCAACAGATGTTAAAGCATACATGGAAAAAGACGGAGACGTGCTTGATCATGGAGTTTTCCAAATCGATGGAAGATCAGCTAGAGGAGGTTGCCAATCTGCCAACGACGCATATGCCGAGGCAATCAATGCAAGGTCCAAACCAGCGGCCCTCAATATATTAA
Protein Sequence MGLLTCMSSYSSEANSSAKTTDSSISPPQAGQHISIRTFRELKPQQMLKHTWKKTETCLIMEFSKSMEDQLEEVANLPTTHMPRQSMQGPNQRPSIY