Papaya leaf crumple virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_000887775.1
Isolate India: Haryana
Release date 2015/2/22
Submitter Singh-Pant,P., Pant,P., Mukherjee,S.K., Mazumdar-Leighton,S., Singh,P.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_014707
ACCGGATGGCCGCGCAAATTTTTAGGTGGGCCCTCAACCAATGAAATTCACGCTACATGGCCTATTTAGTGCGGGGGGACCAATAAATAGACTTGCTCACCAAGTTTGTATCTACAAACATGTGGGACCCACTATTGAATGAGTTTCCAGAAACTGTTCATGGGTTTAGGTGCATGTTGGCAGTGAAATACCTCCAGCTAGTAGAAAATACGTATTCCCCAGACACTCTGGGATACGATTTAATTAGGGATTTAATTTCAGTTATTAGGGCTCGGAATTATGTCGAAGCGACCAGCAGATATCATCATTTCAACGCCCGCCTCGAAGGTACGCCGCCGTCTCAACTTCGACAGCCCATATGCGAGCCGCGCTGCTGCCCCCATTGTCCGCGTCACAAAAGCAAGGGCCTGGACCAACAGGCCCATGAACCGAAAGCCCAGGATGTACAGGATGTACAGGAGCCCAGATGTTCCAAGGGGCTGTGAAGGCCCGTGTAAGGTCCAGTCATTTGAGTCCAGACATGATATCCAGCACATTGGGAAAGTCATGTGTGTTAGTGATGTTACTCGTGGTATTGGGCTGACCCACAGGGTTGGCAAGAGGTTCTGTGTGAAGTCCGTCTATGTATTGGGCAAGATTTGGATGGATGAGAACATCAAGACTAAGAATCATACGAATAGTGTTATGTTTTTCCTTGTTAGGGATCGTAGGCCTGTTGACAAGCCTCAAGATTTTGGTGAGGTTTTTAACATGTTTGATAATGAGCCCAGCACGGCGACTGTGAAGAATGTTCATCGTGACAGATATCAGGTGTTAAGGAAGTGGCATGCCACTGTGACAGGCGGTTTATACGCACCGAAGGAGCAGGCTCTCGTGAAGAAGTTTATTAGGGTCAATAATTATGTTGTGTACAACTACCAAGAGGCTGGCAAGTATGAGAATCATACTGAGAATGCATTGATGTTGTATATGGCGTGTACGCACGCCTCTAACCCCGTGTATGCCACTTTGAAGATACGGATCTACTTCTATGATTCAGTATCGAATTAATAAATATTGAATTTTATATCATGATCCTCAATTACATTAATTGTGCCCTCAAGTACATCATATAATACATGTCTGAAAGCCTTAATACAATTATTTATACTAATTACGCCTAAACTATCTAAATATCTTAAAACTTGAGTCTTAAAGACTCTTAAGAAATGCCAAGTCTGAAGATGTAAACGAGTGTGGATCCTCAAGCCCAAGAAACAATTCATTATCCCCAGTCTCTTCCTGAGGTTGTGATTGAATTGTATCTGAACGGAGATGATGTCTTCCTTCATTAGGAACGGCCTGTTGTGGTGTTCTGTTATCTTGAAATAGAGGGGATTTGGGGTTTCCCAGATATACACGCCATTCATTGCATGACCTGCAGTGATGGATTCCCCTGTGCGTGAATCCATGGTTGTGGCAGTTGATGTGTACGTAGTATGAGCAGCCACACTCGAGGTCAACCCTCTTACGCCGGAAGGCTCTACGCTTGGCTAGCCTGTGTTGGACCTTGATGGGTACCTGAGTACAGTGGCTCTGTGAGGGTGATGAATGTTGCATTATGTATAGCCCACGACCTCAGTGCTGAGTTCTTTTCCTCATCGAGGTATTCTCTATAGCAGGAATTGGGCCCAGAATTGCAGAGGAAGATAGTGGGAATACCTCCTTTAATTTGAACTGGTTTCCCGTACTTGGTGTTACTTTGCCAGTCCCTCTGGACCCCCATGAACTCTTTAAAATGCTTTAGGTAGTGGGGGTCTACGTCATCAATGATGTTATACCATGCATCATTTGAATATATCTTGCGACTCAGATCTAAATGTCCACACAGGTAATTGTGTGGTCCCAAAGACCTGGCCCACATTGTCTTGCCCGTACGACTATCACCCTCAATGACGATACTTTTAGGTCTCAATGGCCGCGCAGCGGGACCCATCACATTTTCAGAGGCCCATTCCTCTATGGCCTCTGGAACTTGATCGAAGGAAGATGAAAGAAAAGGGGAAACATAAACCTCCATTGGAGGTGCAAAAATCCTATCTAAATTAGCATTAAGATTATGAAATTGTAAGACATAATCCTTTGGGGCTAATTCCCTAATGACTCTAAGAGCCTCTGACTTACTGCCTGTATTAATTGCTTTGGCGTAAGCATCATTGGCTGACTGTTGTCCCCCTCTTGCAGATCGTCCATCGATCTGAAACTCTCCCCAGTCGAGGGTGTCTCCATCCTTCTCCATATAGGACTTGACATCTGAGCTTGACTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCTGGTTGGGGATACCAGGTCGAAGAACCTGTTATTTTGGCACTTGTATTTTCCTTCGAACTGGATGAGCACGTGAAGATGAGGTTCCCCATTTTCGTGGAGCTCTCTGCAGATTTTTATGTATTTTTTATTTACTGGGGTTTGTAGGTTCTGAAGTTGGGTGAGTGCCTCTTCTTTAGTAAGAGAGCATTTTGGATAAGTGAGAAAGAAATTTTTGGCATATATTTGAAAACGCTTGGGAGGAGCCATTGACTTGGTCAATCGGTACTCAGCACTAGTCCTATGGCAATTGGTGATCAGTACTCAATATATAGTGAGTACCAAATGGCAGAATTGTAATTTGGAAAAGAAAATTACTTTAATTCAAATTCCCATAAAGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession YP_004021917.1
Location 120-485
Gene Name AV2
Protein Name AV2 protein
Coding Region ATGTGGGACCCACTATTGAATGAGTTTCCAGAAACTGTTCATGGGTTTAGGTGCATGTTGGCAGTGAAATACCTCCAGCTAGTAGAAAATACGTATTCCCCAGACACTCTGGGATACGATTTAATTAGGGATTTAATTTCAGTTATTAGGGCTCGGAATTATGTCGAAGCGACCAGCAGATATCATCATTTCAACGCCCGCCTCGAAGGTACGCCGCCGTCTCAACTTCGACAGCCCATATGCGAGCCGCGCTGCTGCCCCCATTGTCCGCGTCACAAAAGCAAGGGCCTGGACCAACAGGCCCATGAACCGAAAGCCCAGGATGTACAGGATGTACAGGAGCCCAGATGTTCCAAGGGGCTGTGA
Protein Sequence MWDPLLNEFPETVHGFRCMLAVKYLQLVENTYSPDTLGYDLIRDLISVIRARNYVEATSRYHHFNARLEGTPPSQLRQPICEPRCCPHCPRHKSKGLDQQAHEPKAQDVQDVQEPRCSKGL

NCBI Accession YP_004021918.1
Location 258-548
Gene Name AC5
Protein Name AC5 protein
Coding Region ATGACTTTCCCAATGTGCTGGATATCATGTCTGGACTCAAATGACTGGACCTTACACGGGCCTTCACAGCCCCTTGGAACATCTGGGCTCCTGTACATCCTGTACATCCTGGGCTTTCGGTTCATGGGCCTGTTGGTCCAGGCCCTTGCTTTTGTGACGCGGACAATGGGGGCAGCAGCGCGGCTCGCATATGGGCTGTCGAAGTTGAGACGGCGGCGTACCTTCGAGGCGGGCGTTGAAATGATGATATCTGCTGGTCGCTTCGACATAATTCCGAGCCCTAATAACTGA
Protein Sequence MTFPMCWISCLDSNDWTLHGPSQPLGTSGLLYILYILGFRFMGLLVQALAFVTRTMGAAARLAYGLSKLRRRRTFEAGVEMMISAGRFDIIPSPNN

NCBI Accession YP_004021919.1
Location 280-1050
Gene Name AV1
Protein Name AV1 protein
Coding Region ATGTCGAAGCGACCAGCAGATATCATCATTTCAACGCCCGCCTCGAAGGTACGCCGCCGTCTCAACTTCGACAGCCCATATGCGAGCCGCGCTGCTGCCCCCATTGTCCGCGTCACAAAAGCAAGGGCCTGGACCAACAGGCCCATGAACCGAAAGCCCAGGATGTACAGGATGTACAGGAGCCCAGATGTTCCAAGGGGCTGTGAAGGCCCGTGTAAGGTCCAGTCATTTGAGTCCAGACATGATATCCAGCACATTGGGAAAGTCATGTGTGTTAGTGATGTTACTCGTGGTATTGGGCTGACCCACAGGGTTGGCAAGAGGTTCTGTGTGAAGTCCGTCTATGTATTGGGCAAGATTTGGATGGATGAGAACATCAAGACTAAGAATCATACGAATAGTGTTATGTTTTTCCTTGTTAGGGATCGTAGGCCTGTTGACAAGCCTCAAGATTTTGGTGAGGTTTTTAACATGTTTGATAATGAGCCCAGCACGGCGACTGTGAAGAATGTTCATCGTGACAGATATCAGGTGTTAAGGAAGTGGCATGCCACTGTGACAGGCGGTTTATACGCACCGAAGGAGCAGGCTCTCGTGAAGAAGTTTATTAGGGTCAATAATTATGTTGTGTACAACTACCAAGAGGCTGGCAAGTATGAGAATCATACTGAGAATGCATTGATGTTGTATATGGCGTGTACGCACGCCTCTAACCCCGTGTATGCCACTTTGAAGATACGGATCTACTTCTATGATTCAGTATCGAATTAA
Protein Sequence MSKRPADIIISTPASKVRRRLNFDSPYASRAAAPIVRVTKARAWTNRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGIGLTHRVGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEPSTATVKNVHRDRYQVLRKWHATVTGGLYAPKEQALVKKFIRVNNYVVYNYQEAGKYENHTENALMLYMACTHASNPVYATLKIRIYFYDSVSN

NCBI Accession YP_004021920.1
Location 1047-1451
Gene Name AC3
Protein Name AC3 protein
Coding Region ATGGATTCACGCACAGGGGAATCCATCACTGCAGGTCATGCAATGAATGGCGTGTATATCTGGGAAACCCCAAATCCCCTCTATTTCAAGATAACAGAACACCACAACAGGCCGTTCCTAATGAAGGAAGACATCATCTCCGTTCAGATACAATTCAATCACAACCTCAGGAAGAGACTGGGGATAATGAATTGTTTCTTGGGCTTGAGGATCCACACTCGTTTACATCTTCAGACTTGGCATTTCTTAAGAGTCTTTAAGACTCAAGTTTTAAGATATTTAGATAGTTTAGGCGTAATTAGTATAAATAATTGTATTAAGGCTTTCAGACATGTATTATATGATGTACTTGAGGGCACAATTAATGTAATTGAGGATCATGATATAAAATTCAATATTTATTAA
Protein Sequence MDSRTGESITAGHAMNGVYIWETPNPLYFKITEHHNRPFLMKEDIISVQIQFNHNLRKRLGIMNCFLGLRIHTRLHLQTWHFLRVFKTQVLRYLDSLGVISINNCIKAFRHVLYDVLEGTINVIEDHDIKFNIY

NCBI Accession YP_004021921.1
Location 1192-1599
Gene Name AC2
Protein Name AC2 protein
Coding Region ATGCAACATTCATCACCCTCACAGAGCCACTGTACTCAGGTACCCATCAAGGTCCAACACAGGCTAGCCAAGCGTAGAGCCTTCCGGCGTAAGAGGGTTGACCTCGAGTGTGGCTGCTCATACTACGTACACATCAACTGCCACAACCATGGATTCACGCACAGGGGAATCCATCACTGCAGGTCATGCAATGAATGGCGTGTATATCTGGGAAACCCCAAATCCCCTCTATTTCAAGATAACAGAACACCACAACAGGCCGTTCCTAATGAAGGAAGACATCATCTCCGTTCAGATACAATTCAATCACAACCTCAGGAAGAGACTGGGGATAATGAATTGTTTCTTGGGCTTGAGGATCCACACTCGTTTACATCTTCAGACTTGGCATTTCTTAAGAGTCTTTAA
Protein Sequence MQHSSPSQSHCTQVPIKVQHRLAKRRAFRRKRVDLECGCSYYVHINCHNHGFTHRGIHHCRSCNEWRVYLGNPKSPLFQDNRTPQQAVPNEGRHHLRSDTIQSQPQEETGDNELFLGLEDPHSFTSSDLAFLKSL

NCBI Accession YP_004021922.1
Location 1523-2587
Gene Name AC1
Protein Name AC1 protein
Coding Region ATGGCTCCTCCCAAGCGTTTTCAAATATATGCCAAAAATTTCTTTCTCACTTATCCAAAATGCTCTCTTACTAAAGAAGAGGCACTCACCCAACTTCAGAACCTACAAACCCCAGTAAATAAAAAATACATAAAAATCTGCAGAGAGCTCCACGAAAATGGGGAACCTCATCTTCACGTGCTCATCCAGTTCGAAGGAAAATACAAGTGCCAAAATAACAGGTTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAGTCAAGCTCAGATGTCAAGTCCTATATGGAGAAGGATGGAGACACCCTCGACTGGGGAGAGTTTCAGATCGATGGACGATCTGCAAGAGGGGGACAACAGTCAGCCAATGATGCTTACGCCAAAGCAATTAATACAGGCAGTAAGTCAGAGGCTCTTAGAGTCATTAGGGAATTAGCCCCAAAGGATTATGTCTTACAATTTCATAATCTTAATGCTAATTTAGATAGGATTTTTGCACCTCCAATGGAGGTTTATGTTTCCCCTTTTCTTTCATCTTCCTTCGATCAAGTTCCAGAGGCCATAGAGGAATGGGCCTCTGAAAATGTGATGGGTCCCGCTGCGCGGCCATTGAGACCTAAAAGTATCGTCATTGAGGGTGATAGTCGTACGGGCAAGACAATGTGGGCCAGGTCTTTGGGACCACACAATTACCTGTGTGGACATTTAGATCTGAGTCGCAAGATATATTCAAATGATGCATGGTATAACATCATTGATGACGTAGACCCCCACTACCTAAAGCATTTTAAAGAGTTCATGGGGGTCCAGAGGGACTGGCAAAGTAACACCAAGTACGGGAAACCAGTTCAAATTAAAGGAGGTATTCCCACTATCTTCCTCTGCAATTCTGGGCCCAATTCCTGCTATAGAGAATACCTCGATGAGGAAAAGAACTCAGCACTGAGGTCGTGGGCTATACATAATGCAACATTCATCACCCTCACAGAGCCACTGTACTCAGGTACCCATCAAGGTCCAACACAGGCTAGCCAAGCGTAG
Protein Sequence MAPPKRFQIYAKNFFLTYPKCSLTKEEALTQLQNLQTPVNKKYIKICRELHENGEPHLHVLIQFEGKYKCQNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYMEKDGDTLDWGEFQIDGRSARGGQQSANDAYAKAINTGSKSEALRVIRELAPKDYVLQFHNLNANLDRIFAPPMEVYVSPFLSSSFDQVPEAIEEWASENVMGPAARPLRPKSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSRKIYSNDAWYNIIDDVDPHYLKHFKEFMGVQRDWQSNTKYGKPVQIKGGIPTIFLCNSGPNSCYREYLDEEKNSALRSWAIHNATFITLTEPLYSGTHQGPTQASQA

NCBI Accession YP_004021923.1
Location 2128-2430
Gene Name AC4
Protein Name AC4 protein
Coding Region ATGGGGAACCTCATCTTCACGTGCTCATCCAGTTCGAAGGAAAATACAAGTGCCAAAATAACAGGTTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAGTCAAGCTCAGATGTCAAGTCCTATATGGAGAAGGATGGAGACACCCTCGACTGGGGAGAGTTTCAGATCGATGGACGATCTGCAAGAGGGGGACAACAGTCAGCCAATGATGCTTACGCCAAAGCAATTAATACAGGCAGTAAGTCAGAGGCTCTTAGAGTCATTAGGGAATTAG
Protein Sequence MGNLIFTCSSSSKENTSAKITGSSTWYPQPGQHISIRTFRELSQAQMSSPIWRRMETPSTGESFRSMDDLQEGDNSQPMMLTPKQLIQAVSQRLLESLGN