Okra yellow mosaic Mexico virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_000889735.1
Isolate Mexico: Morelos
Release date 2015/2/22
Submitter De La Torre-Almaraz,R., Monsalvo-Reyes,A., Ambriz-Granados,S., Arguello-Astorga,G.R., Monsalvo-Reyes,R., De la Torre-Almaraz,R., Mauricio-Castillo,J.A.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_014066
ACCGGATGGCCGCGCGATTTTTTTGCCCCCTCGTGCGTTCGCCTCTCTTTAATTTGAATTAAAGCGTTCCGCTTTCGTCTCGTCCAATCAGGTAACGTCTGACGAGCTAAGATATTTCAAACAACTTGGGCGCCAAGTTGTTGGGTTTCGGTTATAAATTAAAGAGGCTTTGGCCCACTGGATTTAATTCAAAATGCCTAAGCGCGATCTCCCATGGCGCTCGATCGCGGGAACCTCAAAGGTGAGCCGCAATGCTAATTATTCTCCTCGTGCAGGAAGTGGGCCAAGAGTTAACAAGGCCTCTGAATGGGTGAACAGGCCCATGTACAGGAAGCCCAGGATCTACCGGACAATGAGAACGCCCGACGTGCCAAGAGGCTGTGAAGGGCCTTGCAAGGTCCAGTCCTTTGAACAGCGTCATGATGTCTCTCACGTGGGTAAGGTCATTTGTATATCTGATGTGACACGTGGTAATGGTATCACTCACCGTGTAGGTAAGCGTTTCTGTGTTAAGTCTGTGTATATCCTCGGTAAGATCTGGATGGATGAGAACATCAAGCTCAAGAACCACACGAACAGTGTTATGTTCTGGTTGGTCAGGGATCGTAGACCGTATGGCACGCCCATGGATTTCGGGCAAGTGTTCAACATGTTCGACAACGAGCCTAGCACTGCCACGGTGAAGAACGACCTACGCGACCGCTACCAGGTGATGCACAAGTTTTACGGCAAGGTGACAGGTGGACAGTATGCCAGCAACGAGCAGGCGATAGTCAAGCGCTTCTGGAAGGTCAACAATCATGTGGTGTACAACCACCAGGAAGCTGGCAAGTACGAGAATCACACGGAGAATGCTTTGTTATTGTATATGGCATGTACTCATGCCTCTAACCCTGTATATGCAACGCTTAAGATTCGGATCTACTTCTACGATTCGATCATGAATTAATAAAGTTTAAATTTTATTGAATGATTTTCCAGCACATAATTTACATAAGATCTATCCGTTGCGAAACGAACAGCTCTGATTACATTGTTAAGTGAAATTACGCCTAATCGATCTAAATACAAATTAACTAAGTGCATAAACCTAGCTAAATAAGTCGACCCAGAAGCTGTCATCGATGTCGTCCAGACTTGGAAGTTCAGGTAGGCCTTGTGGAGATGCAACGCTCTCCTCAGGTTGTGGTTGAACCGTATTTGTACGTGGTATACTCTGGTCCTCGTGTATAGTGGATCTTCTACTCGGTACATCTTGAAATACAGGGGATTTTCTATCTCCCAGATATAGACGCCATTCTCGCTCTGAGGTGCAGTGATGAGTTCCCCTGTGCGTGAATCCATGACCCGTACAGCCTATGTGTAAGTATATGGAGCACCCGCACTCCAGATCAATCCGCCTCCTCCTGATGGCTCTCCTCTTGGCTTGCCTGTGTGCTGTCTTGATAGAGGGCGGATGTGAGGGTGATGAAGAGCGCATTCTTGATGGTCCAGTTCCTGAGTGATGCGTTTTCCTCTTTGTCGAGGAAATCTTTATAGCTTGCACCCTCACCTGGATTGCAAAGCACGATTGATGGGATACCTCCTTTAATTTGAACTGGCTTGCCGTATTTGCAATTTGACTGCCAATCCTTTTGGGCCCCGATCAATTCTTTCCAGTGCTTTAGCTTTAGATAGTGCGGTGCGACGTCGTCAATGACGTTATACTCCACTTCGTTTGAATAGACTCGTGGGTTGAAGTCCAGGTGTCCACTGAGGTAGTTATGTGGGCCTAGCGCACGTGCCCACATTGTCTTTCCGGTCCTCGAATCACCTTCAACGATGATACTAACTGGTCTCTCAGGCCGCGCAGCGGGATCCCTTCCAAAATATTCATCGACCCACTCTTGCATCTCGTCAGGCACGTTAGTGAACGAGGAGAGTTGAAACGGAGGGACCCATGGTTCCGGAGCCTTTTGGAATATTTTGGTGGCGTTGGCGACGAGGTTGTGGTGCTGAAGGAAGAAATGTTGCGGTTGTTCTTCTTTGATAATACGCAGCGCTTCCTCCGCCGACGATGCATTCAACGCCTTGGCATATGTATCGTTAGCTGATTGCTGGCCTCCTCTAGCAGATCTGCCGTCGATCTGAAATTCTCCCCATTCGATTGTATCTCCGTCCTTGTCGATATAGGATTTGACGTCGGAGCTGGATTTAGTTCCCTGAATGTTCGGATGGAAATGTGCTGACCGACTTGGGGACACCAGGTCGAAGAATCTGTTATTCGTGCATCTGTATTTCCCCTCGAACTGGATAAGGACGTGCAGATGAGGTTGCCCATCTTCGTGAAGTTCTCTGCAGATTTTGATGAATTTCTTGTTGACCGGAGTGTTTAGGTTTTGTAATTGGGAAAGTGCCTCTTCTTTTGTAAGAGAACACTGTGGATATGTGAGGAAATAGTTTTTCTGATTTATCTGAAATCGTTTAGGCGGTGGCATATTTGTAAATAAGAGAGTGTGTACCAATTGAGCTCTCTCAAAACTTAGCAAATGAATTGGTACACAGGTACACAATATATAGTAGAACCCTCATTAACGGATTTGTGACACTTGGCGGCCATCCGCTATAATATT

Gene Information

NCBI Accession YP_003587818.1
Location 194-949
Gene Name cp
Protein Name coat protein
Coding Region ATGCCTAAGCGCGATCTCCCATGGCGCTCGATCGCGGGAACCTCAAAGGTGAGCCGCAATGCTAATTATTCTCCTCGTGCAGGAAGTGGGCCAAGAGTTAACAAGGCCTCTGAATGGGTGAACAGGCCCATGTACAGGAAGCCCAGGATCTACCGGACAATGAGAACGCCCGACGTGCCAAGAGGCTGTGAAGGGCCTTGCAAGGTCCAGTCCTTTGAACAGCGTCATGATGTCTCTCACGTGGGTAAGGTCATTTGTATATCTGATGTGACACGTGGTAATGGTATCACTCACCGTGTAGGTAAGCGTTTCTGTGTTAAGTCTGTGTATATCCTCGGTAAGATCTGGATGGATGAGAACATCAAGCTCAAGAACCACACGAACAGTGTTATGTTCTGGTTGGTCAGGGATCGTAGACCGTATGGCACGCCCATGGATTTCGGGCAAGTGTTCAACATGTTCGACAACGAGCCTAGCACTGCCACGGTGAAGAACGACCTACGCGACCGCTACCAGGTGATGCACAAGTTTTACGGCAAGGTGACAGGTGGACAGTATGCCAGCAACGAGCAGGCGATAGTCAAGCGCTTCTGGAAGGTCAACAATCATGTGGTGTACAACCACCAGGAAGCTGGCAAGTACGAGAATCACACGGAGAATGCTTTGTTATTGTATATGGCATGTACTCATGCCTCTAACCCTGTATATGCAACGCTTAAGATTCGGATCTACTTCTACGATTCGATCATGAATTAA
Protein Sequence MPKRDLPWRSIAGTSKVSRNANYSPRAGSGPRVNKASEWVNRPMYRKPRIYRTMRTPDVPRGCEGPCKVQSFEQRHDVSHVGKVICISDVTRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRYQVMHKFYGKVTGGQYASNEQAIVKRFWKVNNHVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSIMN

NCBI Accession YP_003587819.1
Location 946-1344
Gene Name AC3
Protein Name replication enhancer protein
Coding Region ATGGATTCACGCACAGGGGAACTCATCACTGCACCTCAGAGCGAGAATGGCGTCTATATCTGGGAGATAGAAAATCCCCTGTATTTCAAGATGTACCGAGTAGAAGATCCACTATACACGAGGACCAGAGTATACCACGTACAAATACGGTTCAACCACAACCTGAGGAGAGCGTTGCATCTCCACAAGGCCTACCTGAACTTCCAAGTCTGGACGACATCGATGACAGCTTCTGGGTCGACTTATTTAGCTAGGTTTATGCACTTAGTTAATTTGTATTTAGATCGATTAGGCGTAATTTCACTTAACAATGTAATCAGAGCTGTTCGTTTCGCAACGGATAGATCTTATGTAAATTATGTGCTGGAAAATCATTCAATAAAATTTAAACTTTATTAA
Protein Sequence MDSRTGELITAPQSENGVYIWEIENPLYFKMYRVEDPLYTRTRVYHVQIRFNHNLRRALHLHKAYLNFQVWTTSMTASGSTYLARFMHLVNLYLDRLGVISLNNVIRAVRFATDRSYVNYVLENHSIKFKLY

NCBI Accession YP_003587820.1
Location 1091-1480
Gene Name AC2
Protein Name transcription activator protein
Coding Region ATGCGCTCTTCATCACCCTCACATCCGCCCTCTATCAAGACAGCACACAGGCAAGCCAAGAGGAGAGCCATCAGGAGGAGGCGGATTGATCTGGAGTGCGGGTGCTCCATATACTTACACATAGGCTGTACGGGTCATGGATTCACGCACAGGGGAACTCATCACTGCACCTCAGAGCGAGAATGGCGTCTATATCTGGGAGATAGAAAATCCCCTGTATTTCAAGATGTACCGAGTAGAAGATCCACTATACACGAGGACCAGAGTATACCACGTACAAATACGGTTCAACCACAACCTGAGGAGAGCGTTGCATCTCCACAAGGCCTACCTGAACTTCCAAGTCTGGACGACATCGATGACAGCTTCTGGGTCGACTTATTTAGCTAG
Protein Sequence MRSSSPSHPPSIKTAHRQAKRRAIRRRRIDLECGCSIYLHIGCTGHGFTHRGTHHCTSEREWRLYLGDRKSPVFQDVPSRRSTIHEDQSIPRTNTVQPQPEESVASPQGLPELPSLDDIDDSFWVDLFS

NCBI Accession YP_003587821.1
Location 1392-2477
Gene Name AC1
Protein Name replication initiator protein
Coding Region ATGCCACCGCCTAAACGATTTCAGATAAATCAGAAAAACTATTTCCTCACATATCCACAGTGTTCTCTTACAAAAGAAGAGGCACTTTCCCAATTACAAAACCTAAACACTCCGGTCAACAAGAAATTCATCAAAATCTGCAGAGAACTTCACGAAGATGGGCAACCTCATCTGCACGTCCTTATCCAGTTCGAGGGGAAATACAGATGCACGAATAACAGATTCTTCGACCTGGTGTCCCCAAGTCGGTCAGCACATTTCCATCCGAACATTCAGGGAACTAAATCCAGCTCCGACGTCAAATCCTATATCGACAAGGACGGAGATACAATCGAATGGGGAGAATTTCAGATCGACGGCAGATCTGCTAGAGGAGGCCAGCAATCAGCTAACGATACATATGCCAAGGCGTTGAATGCATCGTCGGCGGAGGAAGCGCTGCGTATTATCAAAGAAGAACAACCGCAACATTTCTTCCTTCAGCACCACAACCTCGTCGCCAACGCCACCAAAATATTCCAAAAGGCTCCGGAACCATGGGTCCCTCCGTTTCAACTCTCCTCGTTCACTAACGTGCCTGACGAGATGCAAGAGTGGGTCGATGAATATTTTGGAAGGGATCCCGCTGCGCGGCCTGAGAGACCAGTTAGTATCATCGTTGAAGGTGATTCGAGGACCGGAAAGACAATGTGGGCACGTGCGCTAGGCCCACATAACTACCTCAGTGGACACCTGGACTTCAACCCACGAGTCTATTCAAACGAAGTGGAGTATAACGTCATTGACGACGTCGCACCGCACTATCTAAAGCTAAAGCACTGGAAAGAATTGATCGGGGCCCAAAAGGATTGGCAGTCAAATTGCAAATACGGCAAGCCAGTTCAAATTAAAGGAGGTATCCCATCAATCGTGCTTTGCAATCCAGGTGAGGGTGCAAGCTATAAAGATTTCCTCGACAAAGAGGAAAACGCATCACTCAGGAACTGGACCATCAAGAATGCGCTCTTCATCACCCTCACATCCGCCCTCTATCAAGACAGCACACAGGCAAGCCAAGAGGAGAGCCATCAGGAGGAGGCGGATTGA
Protein Sequence MPPPKRFQINQKNYFLTYPQCSLTKEEALSQLQNLNTPVNKKFIKICRELHEDGQPHLHVLIQFEGKYRCTNNRFFDLVSPSRSAHFHPNIQGTKSSSDVKSYIDKDGDTIEWGEFQIDGRSARGGQQSANDTYAKALNASSAEEALRIIKEEQPQHFFLQHHNLVANATKIFQKAPEPWVPPFQLSSFTNVPDEMQEWVDEYFGRDPAARPERPVSIIVEGDSRTGKTMWARALGPHNYLSGHLDFNPRVYSNEVEYNVIDDVAPHYLKLKHWKELIGAQKDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDFLDKEENASLRNWTIKNALFITLTSALYQDSTQASQEESHQEEAD

NCBI Accession YP_003587822.1
Location 2063-2320
Gene Name AC4
Protein Name AC4
Coding Region ATGGGCAACCTCATCTGCACGTCCTTATCCAGTTCGAGGGGAAATACAGATGCACGAATAACAGATTCTTCGACCTGGTGTCCCCAAGTCGGTCAGCACATTTCCATCCGAACATTCAGGGAACTAAATCCAGCTCCGACGTCAAATCCTATATCGACAAGGACGGAGATACAATCGAATGGGGAGAATTTCAGATCGACGGCAGATCTGCTAGAGGAGGCCAGCAATCAGCTAACGATACATATGCCAAGGCGTTGA
Protein Sequence MGNLICTSLSSSRGNTDARITDSSTWCPQVGQHISIRTFRELNPAPTSNPISTRTEIQSNGENFRSTADLLEEASNQLTIHMPRR