Okra enation leaf curl virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_000887915.1
Isolate India: Munthal, Haryana
Release date 2015/2/22
Submitter Venkataravanappa,V., Lakshminarayana Reddy,C.N., Jalali,S., Krishna Reddy,M., Lakshiminarayanareddy,C.N., Devaraju, Swaranalatha,P., Krishnareddy,M.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_014894
ACCGGATGGCCGCGCGATTTTTTTTAGTGGTGGGTCCAGAACGCACGACGATGCAGACTCAAAGCTTAGATAACGCTCCTTTCGCTATAAGTACTTGCGCACTAAGTTTCAAATTGAAACATGTGGGATCCATTGTTAAACGAGTTCCCTGAGACGGTTCACGGGTTTCGTTGCATGCTTGCTATTAAATATCTTCAACAACTGTCTGAGGAATACTCTCCTGATACGGTTGGGTACGATCTAATTCGCGATCTAATTTCTATTTTACGTTGTAGGAATTATGTCGAAGCGTCCTGCCGATATCGTCATTTCTACCCCCGCGTCGAAGGTGCGTCGTCGACTGAACTTCGACAGCCCGTATTCAACCCGTGCAGTTGCCCCCACTGTCCGCGTCACAAAATCACGAATGTGGGCCAACAGACCCATGTACCGGAAGCCCAGAATGTACAGGATATACAGAAGCCCGGATGTTCCAAGAGGATGTGAAGGCCCATGTAAGGTGCAGTCTTTTGATGCGAAGAACGATATTGGTCACATGGGTAAGGTTATCTGTCTATCTGATGTTACTAGGGGTATTGGGCTGACCCATCGAGTAGGGAAACGTTTTTGCGTGAAGTCATTGATTTGCAGGGAGAACATCAAGACCAAGAACCATACGAATTCGGTGATGTTTTGGATCGTGAGAGACAGGCGTCCTACAGGCACCCCCTACGATTTCCAGCAAGTGTTCAATGTTTATGACAACGAGCCTTCTACGGCTACTGTAAAGAACGACCAGCGTGATCGATTCCAGGTTTTGAGGAGGTTTCAGGCGACAGTTACAGGAGGACAGTATGCTTGTAAGGAACAAGTTCCAATTAGGAAATTCTATCGTGTTAACAATTACGTGGTGTATAATCACCAGGAAGCTGGGAAGTATGAAAATCACACTGAGAATGCTTTGTTGTTGTATATGGCATGTACTCATGCCTCTAACCCTGTGTATGCTACTTTGAAAGTTAGGAGTTACTTCTACGATTCTGTAACGAATTAATATTAATAAAGATCGAATTTTATATCTGAATATTGATCCACATACATTGTTTGTTGAATTACATTGTACAATACGTGTTCTACAGCCTTAATTACTAAATTAATTGAGATTACACCTAGATTGTTGAGATACTTGAGGACTTGGGTTTTTAATACCCTTAAGAAAAGACCAGTCTGAGGGTGTAAGGTCGTCCAGATTCGGAAGGTCAGAAAACACTTGTGCACTCCCAGAGCTCTCCGAAGGTTGTAGTTGAATTGGATCCTGATTTTTATTATGTCCATGTTCGTCGTGAATGGACGGTCGTCGTGGCTGAGGATCTTGAAATAGAGGGGATTTGGAACCTCCCAGATAAAGACGCCATTCCTTGTATGAGCTGCAGTGATGCGTTCCCCTGTGCGAGAATCCATGGTTGAAGCAGTTAATGGATAGATAATAAGAACACCCGCATTCAAGATCTACTCTCTTCCTCCTGTGCGCTCTCTTCGCTTCCCTGTGCTGTACTTTGATTGGTACCTGAGTACAATGGTCCTTCAAGGGTGACGAAGATCGCATTTTTCACTGCCCAGTTCTTTAGTGCTGAGTTCTTATCCTCGTCTAAGAACTCTTTATAACTGCTGTTGGGACCAGGATTGCAGAGGAAGATTGTTGGTATGCCGCCTTTAATTTGAACTGGCTTTCCGTACTTTGTGTTGGATTGCCAGTCCCTTTGGGCCCCCATGAACTCTTTAAAGTGTTTGAGGAAGTGGGGATCTACGTCATCAATGACGTTATACCAGGCCTCGTTACTGTAGATCTTTGGACTAAGGTCTAGATGCCCACACAAATAGTTATGTGGACCCAGTGATCTAGCCCACATCGTCTTCCCGGTACGACTATCTCCCTCAATCACTATACTTTGTGGTCTAAGTGGCCGCGCAGCGGCGTCGACAACGTTCTCGGCAGCCCATTCCTCAAGTTCTTCCGGAACTTGATCAAAAGAAGAAGAAGAAAAAGGAGAAACATAAACCTCCACAGGAGGTGTAAAAATCCTATCTAAATTAGCATTTAAATTATGGAATTGTAATACATAATCTTTTGGAGCTAACTCCTTAATGACTCTAAGAGCCTCTGACTTACTGCCTGCGTTAAGCGCTGCGGCGTAAGCGTCGTTGGCTGTCTGTTGTCCCCCTCTAGCAGATCGTCCGTCGATCTGAAACTCTCCCCACTCGAGAGTGTCCCCGTCCTTGTCGATGTAGGATTTGACGTCGGAGCTGGATTTAGCTCCCTGTATGTTCGGATGGAAATGTGCTGACCTGCTTGGGGAGACCAGGTCGAAGAATCGCTGATTCTGGCACTTGTATTTCCCCTCGATCTGGATGAGCACGTGCAGATGAGGTTCCCCATTTTCATGAAGTTCTCTGCAGATTTTAATATATTTTTTTGAAGTGGGGGTTTGGAAATTCTTGATTTGGGAAAGTGCTTCTTCTCTTGTGAGAGAGCACTTGGGATAAGTGAGGAAATAATTTTTGGAATTAATAAGGAACCGCTTAGGAGGCATGTTGACTAAGATAGAGGACCCGATTGACCGCTCTTGCAACTCTCCCCCTGTATATCGGGTCTCAATATATAGTGAGACCCAAATGGCAAAATTGTAATTGTGGGAATAAATTCAAAATCCTCACGCTCCAAAAAGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession YP_004123717.1
Location 121-486
Gene Name AV2
Protein Name precoat protein
Coding Region ATGTGGGATCCATTGTTAAACGAGTTCCCTGAGACGGTTCACGGGTTTCGTTGCATGCTTGCTATTAAATATCTTCAACAACTGTCTGAGGAATACTCTCCTGATACGGTTGGGTACGATCTAATTCGCGATCTAATTTCTATTTTACGTTGTAGGAATTATGTCGAAGCGTCCTGCCGATATCGTCATTTCTACCCCCGCGTCGAAGGTGCGTCGTCGACTGAACTTCGACAGCCCGTATTCAACCCGTGCAGTTGCCCCCACTGTCCGCGTCACAAAATCACGAATGTGGGCCAACAGACCCATGTACCGGAAGCCCAGAATGTACAGGATATACAGAAGCCCGGATGTTCCAAGAGGATGTGA
Protein Sequence MWDPLLNEFPETVHGFRCMLAIKYLQQLSEEYSPDTVGYDLIRDLISILRCRNYVEASCRYRHFYPRVEGASSTELRQPVFNPCSCPHCPRHKITNVGQQTHVPEAQNVQDIQKPGCSKRM

NCBI Accession YP_004123718.1
Location 281-1033
Gene Name AV1
Protein Name coat protein
Coding Region ATGTCGAAGCGTCCTGCCGATATCGTCATTTCTACCCCCGCGTCGAAGGTGCGTCGTCGACTGAACTTCGACAGCCCGTATTCAACCCGTGCAGTTGCCCCCACTGTCCGCGTCACAAAATCACGAATGTGGGCCAACAGACCCATGTACCGGAAGCCCAGAATGTACAGGATATACAGAAGCCCGGATGTTCCAAGAGGATGTGAAGGCCCATGTAAGGTGCAGTCTTTTGATGCGAAGAACGATATTGGTCACATGGGTAAGGTTATCTGTCTATCTGATGTTACTAGGGGTATTGGGCTGACCCATCGAGTAGGGAAACGTTTTTGCGTGAAGTCATTGATTTGCAGGGAGAACATCAAGACCAAGAACCATACGAATTCGGTGATGTTTTGGATCGTGAGAGACAGGCGTCCTACAGGCACCCCCTACGATTTCCAGCAAGTGTTCAATGTTTATGACAACGAGCCTTCTACGGCTACTGTAAAGAACGACCAGCGTGATCGATTCCAGGTTTTGAGGAGGTTTCAGGCGACAGTTACAGGAGGACAGTATGCTTGTAAGGAACAAGTTCCAATTAGGAAATTCTATCGTGTTAACAATTACGTGGTGTATAATCACCAGGAAGCTGGGAAGTATGAAAATCACACTGAGAATGCTTTGTTGTTGTATATGGCATGTACTCATGCCTCTAACCCTGTGTATGCTACTTTGAAAGTTAGGAGTTACTTCTACGATTCTGTAACGAATTAA
Protein Sequence MSKRPADIVISTPASKVRRRLNFDSPYSTRAVAPTVRVTKSRMWANRPMYRKPRMYRIYRSPDVPRGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGIGLTHRVGKRFCVKSLICRENIKTKNHTNSVMFWIVRDRRPTGTPYDFQQVFNVYDNEPSTATVKNDQRDRFQVLRRFQATVTGGQYACKEQVPIRKFYRVNNYVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKVRSYFYDSVTN

NCBI Accession YP_004123719.1
Location 1036-1440
Gene Name AC3
Protein Name replication enhancer protein
Coding Region ATGGATTCTCGCACAGGGGAACGCATCACTGCAGCTCATACAAGGAATGGCGTCTTTATCTGGGAGGTTCCAAATCCCCTCTATTTCAAGATCCTCAGCCACGACGACCGTCCATTCACGACGAACATGGACATAATAAAAATCAGGATCCAATTCAACTACAACCTTCGGAGAGCTCTGGGAGTGCACAAGTGTTTTCTGACCTTCCGAATCTGGACGACCTTACACCCTCAGACTGGTCTTTTCTTAAGGGTATTAAAAACCCAAGTCCTCAAGTATCTCAACAATCTAGGTGTAATCTCAATTAATTTAGTAATTAAGGCTGTAGAACACGTATTGTACAATGTAATTCAACAAACAATGTATGTGGATCAATATTCAGATATAAAATTCGATCTTTATTAA
Protein Sequence MDSRTGERITAAHTRNGVFIWEVPNPLYFKILSHDDRPFTTNMDIIKIRIQFNYNLRRALGVHKCFLTFRIWTTLHPQTGLFLRVLKTQVLKYLNNLGVISINLVIKAVEHVLYNVIQQTMYVDQYSDIKFDLY

NCBI Accession YP_004123720.1
Location 1133-1585
Gene Name AC2
Protein Name transcription activator protein
Coding Region ATGCGATCTTCGTCACCCTTGAAGGACCATTGTACTCAGGTACCAATCAAAGTACAGCACAGGGAAGCGAAGAGAGCGCACAGGAGGAAGAGAGTAGATCTTGAATGCGGGTGTTCTTATTATCTATCCATTAACTGCTTCAACCATGGATTCTCGCACAGGGGAACGCATCACTGCAGCTCATACAAGGAATGGCGTCTTTATCTGGGAGGTTCCAAATCCCCTCTATTTCAAGATCCTCAGCCACGACGACCGTCCATTCACGACGAACATGGACATAATAAAAATCAGGATCCAATTCAACTACAACCTTCGGAGAGCTCTGGGAGTGCACAAGTGTTTTCTGACCTTCCGAATCTGGACGACCTTACACCCTCAGACTGGTCTTTTCTTAAGGGTATTAAAAACCCAAGTCCTCAAGTATCTCAACAATCTAGGTGTAATCTCAATTAA
Protein Sequence MRSSSPLKDHCTQVPIKVQHREAKRAHRRKRVDLECGCSYYLSINCFNHGFSHRGTHHCSSYKEWRLYLGGSKSPLFQDPQPRRPSIHDEHGHNKNQDPIQLQPSESSGSAQVFSDLPNLDDLTPSDWSFLKGIKNPSPQVSQQSRCNLN

NCBI Accession YP_004123721.1
Location 1482-2570
Gene Name AC1
Protein Name replicase
Coding Region ATGCCTCCTAAGCGGTTCCTTATTAATTCCAAAAATTATTTCCTCACTTATCCCAAGTGCTCTCTCACAAGAGAAGAAGCACTTTCCCAAATCAAGAATTTCCAAACCCCCACTTCAAAAAAATATATTAAAATCTGCAGAGAACTTCATGAAAATGGGGAACCTCATCTGCACGTGCTCATCCAGATCGAGGGGAAATACAAGTGCCAGAATCAGCGATTCTTCGACCTGGTCTCCCCAAGCAGGTCAGCACATTTCCATCCGAACATACAGGGAGCTAAATCCAGCTCCGACGTCAAATCCTACATCGACAAGGACGGGGACACTCTCGAGTGGGGAGAGTTTCAGATCGACGGACGATCTGCTAGAGGGGGACAACAGACAGCCAACGACGCTTACGCCGCAGCGCTTAACGCAGGCAGTAAGTCAGAGGCTCTTAGAGTCATTAAGGAGTTAGCTCCAAAAGATTATGTATTACAATTCCATAATTTAAATGCTAATTTAGATAGGATTTTTACACCTCCTGTGGAGGTTTATGTTTCTCCTTTTTCTTCTTCTTCTTTTGATCAAGTTCCGGAAGAACTTGAGGAATGGGCTGCCGAGAACGTTGTCGACGCCGCTGCGCGGCCACTTAGACCACAAAGTATAGTGATTGAGGGAGATAGTCGTACCGGGAAGACGATGTGGGCTAGATCACTGGGTCCACATAACTATTTGTGTGGGCATCTAGACCTTAGTCCAAAGATCTACAGTAACGAGGCCTGGTATAACGTCATTGATGACGTAGATCCCCACTTCCTCAAACACTTTAAAGAGTTCATGGGGGCCCAAAGGGACTGGCAATCCAACACAAAGTACGGAAAGCCAGTTCAAATTAAAGGCGGCATACCAACAATCTTCCTCTGCAATCCTGGTCCCAACAGCAGTTATAAAGAGTTCTTAGACGAGGATAAGAACTCAGCACTAAAGAACTGGGCAGTGAAAAATGCGATCTTCGTCACCCTTGAAGGACCATTGTACTCAGGTACCAATCAAAGTACAGCACAGGGAAGCGAAGAGAGCGCACAGGAGGAAGAGAGTAGATCTTGA
Protein Sequence MPPKRFLINSKNYFLTYPKCSLTREEALSQIKNFQTPTSKKYIKICRELHENGEPHLHVLIQIEGKYKCQNQRFFDLVSPSRSAHFHPNIQGAKSSSDVKSYIDKDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIKELAPKDYVLQFHNLNANLDRIFTPPVEVYVSPFSSSSFDQVPEELEEWAAENVVDAAARPLRPQSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKIYSNEAWYNVIDDVDPHFLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEDKNSALKNWAVKNAIFVTLEGPLYSGTNQSTAQGSEESAQEEESRS

NCBI Accession YP_004123722.1
Location 2114-2416
Gene Name AC4
Protein Name AC4 protein
Coding Region ATGGGGAACCTCATCTGCACGTGCTCATCCAGATCGAGGGGAAATACAAGTGCCAGAATCAGCGATTCTTCGACCTGGTCTCCCCAAGCAGGTCAGCACATTTCCATCCGAACATACAGGGAGCTAAATCCAGCTCCGACGTCAAATCCTACATCGACAAGGACGGGGACACTCTCGAGTGGGGAGAGTTTCAGATCGACGGACGATCTGCTAGAGGGGGACAACAGACAGCCAACGACGCTTACGCCGCAGCGCTTAACGCAGGCAGTAAGTCAGAGGCTCTTAGAGTCATTAAGGAGTTAG
Protein Sequence MGNLICTCSSRSRGNTSARISDSSTWSPQAGQHISIRTYRELNPAPTSNPTSTRTGTLSSGESFRSTDDLLEGDNRQPTTLTPQRLTQAVSQRLLESLRS