Alternanthera yellow vein virus
Basic Information
| Genus |
Begomovirus
|
| NCBI Assembly |
GCF_000866585.1 |
| Isolate |
China:Guangxi |
| Release date |
2015/2/13 |
| Submitter |
Huang,J., Jiang,T., Zhou,X. |
| Host |
|
| Vector |
|
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGATGGCCAAAAAAAAATTTATGCCGGGCCCACCTGGCAGCTTTTGTCTGCCACTAGACAATCCCGTCCAATCAGAATTCAGCCTCAAAGCTTAAATAAAATTGGCGCCCGCTTTAAATGCTTGGCCGCTACGTTTAGTGCGCTGTCCACTATGTGGGATCCGCTTTTGAACCCGTTTCCCCAGACCGTGCACGCCTTTCGTTGCATGCTTTCTGTAAAGTATTTACAGGCCGTTGAAGACACATACGCTCCTGATACTTTAGGCGCTGATTTAATTAGGGAGTTAATTGCAGTAATTAGGGCAAATAATTATGTCGAAGCGTGCAGCAGATATGATCATTTCATCAAGCGGGTCGAGGGTACGACGTCGGCTCAACTTCGACAGCCCTATGGCTCGCCGTGCTACTGCCCCCATTGTCCGTGCCACTCGAAAACAGCAGTGGTCGAGCCGCCCCATGTATCGCAAGCCAAGGTTGTACCGAATGTACAGAAGCCCTGATGTGCCTTATGGCTGTGAGGGTCCGTGTAAGGTCCAGTCATTTGAAAAAAAACATGACGTTAGTCATACTGGCACGTTGTTGTGTGTTTCTGATGTTACCAGAGGTAGTGGGATTACTCATAGAGTAGGGAAGCGTTTCTGCATCAAGTCAATATACATCATAGGGAAGATATGGATGGACGAGAACATTAAGTCCAAGAATCATACTAACACGGTTATGTTCTGGTTAGTTAGGGATCGCCGCCCAGTTACAACGCCTTATGGCTTTGGTGAGGCGTTTAATATGTATGACAATGAGCCCTCTACAGCCACTATCAAGAACGATCTGCGTGATCGTTTGCAGGTGTTACACAGGTTTTCTGCCACAGTTACTGGGGGTCAGTATGCGTCTAAGGAACAGGCTATGATCAAGCGTTTCTGGAGGATTAACAACCATGTGGTCTACAACCATCAGGAGAAGGCAGCTTATGAAAATCATACTGAGAATGCCTTAGTTTTGTATATGGCTTGTACTCATGCTAGCAATCCTGTGTATGCTACGCTGAAAATTAGAATATATTTCTACGACTCTGTAATGAATTAATAAATATTGAATTTTATTATATGATTGAAGTTTACATACAACGTATTGTGCAATGCATTCCATAGTACATGATTTATTGCTCTAATTACATTGTTAAGACAAATTACACCAAGATTATCTAAATACTTCATAACTTGGGTCTTAAAGACCCTTAAGAAACTCAATGTCTGAGGTTGTAAGCGAGTCCAGATCTGGCAAGTCAGAAAACATTTGTGTATCCCCAAAGCCTTCCGCAGGTTGTAGTTGAACTGTATCTGAACTGTAATGATGTCGTGTTCCCGTAGGAATGGTCTGCTGTCGTGTTTGATGATCTTGAAATATAGGGGATTGGTTATTTCCCAGGTATACACGCCATTCTCTGCCTGAGCTGCAGTGATGTATTCCCCTGTGCGTGAATCCATAGTTGTGACAGTCAATGGAGATGTATAGTGAACAGCCGCAACGCAGATCAACCCTCCGTCTGCGAGGTTTCCTCTTGGCTAGCCTGTGTTGGACTTTGATGGGAACCTGAGTACAGCGGCTGGTTGATGGTGACGAAGGTCGCATTCTTTATGGCCCAGTTTTTTAGACCTATGTTTTTCTCCTCATCAAGGAACTCTTTATAGGAGGATGTTGGACCAGGATTGCAGAGGAAGATTGTTGGGATCCCGCCTTTAATTTGAACGGGCTTCCCGTATTTTGTATTGGACTGCCAATCCCTTTGGGCCCCCATGAATTCCTTGAAATGTTTTACATAGTGAGGATCAACATCGTCTATTATGTTATACCAGGCTTCGTTGCTGTAAACCCTAGGACTAAGGTCAATATGACCGCATAAGTAATTATGTGGACCTAATGATCTAGCCCACATGGTTTTCCCAGTCCTGCTGTCACCTTCTATAACTATACTTATTGGTCTCCATGGCCGCGCAGCGGCAGACATTACATTGTCTGCGGCCCATTCTTCAATCTCTTCAGGGACTTGATCAAACGATGAACAATTAAATGGACTAATGTACTCTTCAATAGGAGGCATGAAAATGCGTTCCAGATTAGCATTTAAATTATGAAATTGTAATACATAGTCCTTAGGAGCTAACTCCTTAATTACATCAAGAGCTTGATCCTTATTGCCTGTGTTAATTGCTCTTGCGTAAGCATCGTTTGCTGTCTGTTGTCCCCCTCTTGCAGATCTTCCATCAATCTGGAAGGTGCCCCAGTCAAGTATGTCCCCGTCCTTCTCGATGTATGCCTTAACGTCTGAACTGGACTTAGCATCGGTGATGAAGCAGTGGTATTGGGAGGAGGAGTTGGGTGACTGTAAGTCGAAGAATCTCGGATTCGTGAGGTCGAACTTGCCCTCGAATTGCACAAGAGCATGGAGATGAGGGTTTCCATCCTCGTGTAGTTCTCTACAAACCCTAATGAATTTCTTGTTTACAGGGGTTTGTATATTGAGTAATTGTTCTAGTGCCTCTTCTTTAGAGATAGGGCACTGTGAGTAAGTGAGGAAGAAGTTCTTCCTATTTAATCTGAATCTCCCAGGCTGACGCATGATGACGTATGTATCCCCCGATTGGAGCTCTCTTCAAACTTCCTAGTCAATGGGTGGATAGGTGGATGTTATATAGTGGGGATTTTTCCGGAATAAAAAATTTTTTTTTGGCCATCGCAATAATATT
Gene Information
|
NCBI Accession
|
YP_271824.1
|
|
Location
|
154-501 |
|
Gene Name
|
av2 |
|
Protein Name
|
AV2 protein |
|
Coding Region
|
ATGTGGGATCCGCTTTTGAACCCGTTTCCCCAGACCGTGCACGCCTTTCGTTGCATGCTTTCTGTAAAGTATTTACAGGCCGTTGAAGACACATACGCTCCTGATACTTTAGGCGCTGATTTAATTAGGGAGTTAATTGCAGTAATTAGGGCAAATAATTATGTCGAAGCGTGCAGCAGATATGATCATTTCATCAAGCGGGTCGAGGGTACGACGTCGGCTCAACTTCGACAGCCCTATGGCTCGCCGTGCTACTGCCCCCATTGTCCGTGCCACTCGAAAACAGCAGTGGTCGAGCCGCCCCATGTATCGCAAGCCAAGGTTGTACCGAATGTACAGAAGCCCTGA |
|
Protein Sequence
|
MWDPLLNPFPQTVHAFRCMLSVKYLQAVEDTYAPDTLGADLIRELIAVIRANNYVEACSRYDHFIKRVEGTTSAQLRQPYGSPCYCPHCPCHSKTAVVEPPHVSQAKVVPNVQKP |
|
NCBI Accession
|
YP_271825.1
|
|
Location
|
314-1084 |
|
Gene Name
|
cp |
|
Protein Name
|
CP protein |
|
Coding Region
|
ATGTCGAAGCGTGCAGCAGATATGATCATTTCATCAAGCGGGTCGAGGGTACGACGTCGGCTCAACTTCGACAGCCCTATGGCTCGCCGTGCTACTGCCCCCATTGTCCGTGCCACTCGAAAACAGCAGTGGTCGAGCCGCCCCATGTATCGCAAGCCAAGGTTGTACCGAATGTACAGAAGCCCTGATGTGCCTTATGGCTGTGAGGGTCCGTGTAAGGTCCAGTCATTTGAAAAAAAACATGACGTTAGTCATACTGGCACGTTGTTGTGTGTTTCTGATGTTACCAGAGGTAGTGGGATTACTCATAGAGTAGGGAAGCGTTTCTGCATCAAGTCAATATACATCATAGGGAAGATATGGATGGACGAGAACATTAAGTCCAAGAATCATACTAACACGGTTATGTTCTGGTTAGTTAGGGATCGCCGCCCAGTTACAACGCCTTATGGCTTTGGTGAGGCGTTTAATATGTATGACAATGAGCCCTCTACAGCCACTATCAAGAACGATCTGCGTGATCGTTTGCAGGTGTTACACAGGTTTTCTGCCACAGTTACTGGGGGTCAGTATGCGTCTAAGGAACAGGCTATGATCAAGCGTTTCTGGAGGATTAACAACCATGTGGTCTACAACCATCAGGAGAAGGCAGCTTATGAAAATCATACTGAGAATGCCTTAGTTTTGTATATGGCTTGTACTCATGCTAGCAATCCTGTGTATGCTACGCTGAAAATTAGAATATATTTCTACGACTCTGTAATGAATTAA |
|
Protein Sequence
|
MSKRAADMIISSSGSRVRRRLNFDSPMARRATAPIVRATRKQQWSSRPMYRKPRLYRMYRSPDVPYGCEGPCKVQSFEKKHDVSHTGTLLCVSDVTRGSGITHRVGKRFCIKSIYIIGKIWMDENIKSKNHTNTVMFWLVRDRRPVTTPYGFGEAFNMYDNEPSTATIKNDLRDRLQVLHRFSATVTGGQYASKEQAMIKRFWRINNHVVYNHQEKAAYENHTENALVLYMACTHASNPVYATLKIRIYFYDSVMN |
|
NCBI Accession
|
YP_271826.1
|
|
Location
|
1081-1485 |
|
Gene Name
|
ac3 |
|
Protein Name
|
AC3 protein |
|
Coding Region
|
ATGGATTCACGCACAGGGGAATACATCACTGCAGCTCAGGCAGAGAATGGCGTGTATACCTGGGAAATAACCAATCCCCTATATTTCAAGATCATCAAACACGACAGCAGACCATTCCTACGGGAACACGACATCATTACAGTTCAGATACAGTTCAACTACAACCTGCGGAAGGCTTTGGGGATACACAAATGTTTTCTGACTTGCCAGATCTGGACTCGCTTACAACCTCAGACATTGAGTTTCTTAAGGGTCTTTAAGACCCAAGTTATGAAGTATTTAGATAATCTTGGTGTAATTTGTCTTAACAATGTAATTAGAGCAATAAATCATGTACTATGGAATGCATTGCACAATACGTTGTATGTAAACTTCAATCATATAATAAAATTCAATATTTATTAA |
|
Protein Sequence
|
MDSRTGEYITAAQAENGVYTWEITNPLYFKIIKHDSRPFLREHDIITVQIQFNYNLRKALGIHKCFLTCQIWTRLQPQTLSFLRVFKTQVMKYLDNLGVICLNNVIRAINHVLWNALHNTLYVNFNHIIKFNIY |
|
NCBI Accession
|
YP_271827.1
|
|
Location
|
1226-1630 |
|
Gene Name
|
ac2 |
|
Protein Name
|
AC2 protein |
|
Coding Region
|
ATGCGACCTTCGTCACCATCAACCAGCCGCTGTACTCAGGTTCCCATCAAAGTCCAACACAGGCTAGCCAAGAGGAAACCTCGCAGACGGAGGGTTGATCTGCGTTGCGGCTGTTCACTATACATCTCCATTGACTGTCACAACTATGGATTCACGCACAGGGGAATACATCACTGCAGCTCAGGCAGAGAATGGCGTGTATACCTGGGAAATAACCAATCCCCTATATTTCAAGATCATCAAACACGACAGCAGACCATTCCTACGGGAACACGACATCATTACAGTTCAGATACAGTTCAACTACAACCTGCGGAAGGCTTTGGGGATACACAAATGTTTTCTGACTTGCCAGATCTGGACTCGCTTACAACCTCAGACATTGAGTTTCTTAAGGGTCTTTAA |
|
Protein Sequence
|
MRPSSPSTSRCTQVPIKVQHRLAKRKPRRRRVDLRCGCSLYISIDCHNYGFTHRGIHHCSSGREWRVYLGNNQSPIFQDHQTRQQTIPTGTRHHYSSDTVQLQPAEGFGDTQMFSDLPDLDSLTTSDIEFLKGL |
|
NCBI Accession
|
YP_271828.1
|
|
Location
|
1533-2618 |
|
Gene Name
|
ac1 |
|
Protein Name
|
AC1 protein |
|
Coding Region
|
ATGCGTCAGCCTGGGAGATTCAGATTAAATAGGAAGAACTTCTTCCTCACTTACTCACAGTGCCCTATCTCTAAAGAAGAGGCACTAGAACAATTACTCAATATACAAACCCCTGTAAACAAGAAATTCATTAGGGTTTGTAGAGAACTACACGAGGATGGAAACCCTCATCTCCATGCTCTTGTGCAATTCGAGGGCAAGTTCGACCTCACGAATCCGAGATTCTTCGACTTACAGTCACCCAACTCCTCCTCCCAATACCACTGCTTCATCACCGATGCTAAGTCCAGTTCAGACGTTAAGGCATACATCGAGAAGGACGGGGACATACTTGACTGGGGCACCTTCCAGATTGATGGAAGATCTGCAAGAGGGGGACAACAGACAGCAAACGATGCTTACGCAAGAGCAATTAACACAGGCAATAAGGATCAAGCTCTTGATGTAATTAAGGAGTTAGCTCCTAAGGACTATGTATTACAATTTCATAATTTAAATGCTAATCTGGAACGCATTTTCATGCCTCCTATTGAAGAGTACATTAGTCCATTTAATTGTTCATCGTTTGATCAAGTCCCTGAAGAGATTGAAGAATGGGCCGCAGACAATGTAATGTCTGCCGCTGCGCGGCCATGGAGACCAATAAGTATAGTTATAGAAGGTGACAGCAGGACTGGGAAAACCATGTGGGCTAGATCATTAGGTCCACATAATTACTTATGCGGTCATATTGACCTTAGTCCTAGGGTTTACAGCAACGAAGCCTGGTATAACATAATAGACGATGTTGATCCTCACTATGTAAAACATTTCAAGGAATTCATGGGGGCCCAAAGGGATTGGCAGTCCAATACAAAATACGGGAAGCCCGTTCAAATTAAAGGCGGGATCCCAACAATCTTCCTCTGCAATCCTGGTCCAACATCCTCCTATAAAGAGTTCCTTGATGAGGAGAAAAACATAGGTCTAAAAAACTGGGCCATAAAGAATGCGACCTTCGTCACCATCAACCAGCCGCTGTACTCAGGTTCCCATCAAAGTCCAACACAGGCTAGCCAAGAGGAAACCTCGCAGACGGAGGGTTGA |
|
Protein Sequence
|
MRQPGRFRLNRKNFFLTYSQCPISKEEALEQLLNIQTPVNKKFIRVCRELHEDGNPHLHALVQFEGKFDLTNPRFFDLQSPNSSSQYHCFITDAKSSSDVKAYIEKDGDILDWGTFQIDGRSARGGQQTANDAYARAINTGNKDQALDVIKELAPKDYVLQFHNLNANLERIFMPPIEEYISPFNCSSFDQVPEEIEEWAADNVMSAAARPWRPISIVIEGDSRTGKTMWARSLGPHNYLCGHIDLSPRVYSNEAWYNIIDDVDPHYVKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPTSSYKEFLDEEKNIGLKNWAIKNATFVTINQPLYSGSHQSPTQASQEETSQTEG |
|
NCBI Accession
|
YP_271829.1
|
|
Location
|
2171-2461 |
|
Gene Name
|
ac4 |
|
Protein Name
|
AC4 protein |
|
Coding Region
|
ATGGAAACCCTCATCTCCATGCTCTTGTGCAATTCGAGGGCAAGTTCGACCTCACGAATCCGAGATTCTTCGACTTACAGTCACCCAACTCCTCCTCCCAATACCACTGCTTCATCACCGATGCTAAGTCCAGTTCAGACGTTAAGGCATACATCGAGAAGGACGGGGACATACTTGACTGGGGCACCTTCCAGATTGATGGAAGATCTGCAAGAGGGGGACAACAGACAGCAAACGATGCTTACGCAAGAGCAATTAACACAGGCAATAAGGATCAAGCTCTTGATGTAA |
|
Protein Sequence
|
METLISMLLCNSRASSTSRIRDSSTYSHPTPPPNTTASSPMLSPVQTLRHTSRRTGTYLTGAPSRLMEDLQEGDNRQQTMLTQEQLTQAIRIKLLM |