Ocimum mosaic virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_018589045.1
Isolate Uganda
Release date 2021/6/1
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_055593
ACCGGATGGCCGCCCGCAACCACGCCCCGACTCGCGCGTGTCTTACACATCGTACACGTGGCATTTTATGAGGGTTTCTCACGATGTATTTTGGTACGACGGTATTTTATTAGTAAAGTTCGCCATTTTACGTATTTATGTACGATGTGGGACCCCTTGGAGAATGAATTCCCGGATACCGTTCATGGATTCCGGTGTATGCTCGCCGTCAAATATCTTCTTCTGGTGGAGTCTAAGTATGAGCCGGATACTCTAGGTCGTGATCTCATACGTGATCTTATACGTTGTTTGCGTGCATCGAGTTATAATGAAGCGTCCTGGAGATATAGTAATTTCCACACCCGCTTCCAAAGTTCGGCGTCGTCTGAATTTCGACAGCCCATACTCCGCCCGTGTACCTGTCAGCACTGTCCGTACTTCCAGAAGACGAATATGGGCCTCGCGTCCTATGTACAGAAAGCCCAAGATATACCGGATTTACAGAAGCCCGGATGTTCCAAAGGGCTGTGAAGGTCCGTGTAAAGTTCAATCTTATGAGGCCCGTCATGATGTAAAGCATACTGGTACTGTATTATGTTGCTCCGACGTTACACGTGGTAGTGGTTTGACTCACCGCGTTGGTAAGAGGTTTACTATCAAGTCTATTTACATATTGGGTAAGATCTGGATGGATGAGAATATCAAGAAGAAGAATCACACTAATATTGTCATGTTTTATCTTGTTCGGGATCGTCGGCCGTCTGATAAACCTTATGAATTTGGTTCTGTGTTTAACATGTTTGACAATGAGCCGGCTACTGCGACAGTGAAGATGGATCATCGGGATAGGTTTCAGGTTTTGCATAAGTTTTATGGTTGGGTTACCGGTGGTGAATACGCGTCTAAAGAGCAGGCGATGATTAGGAGGTTTTATAAGATATATCATCCTGTGGTGTACAACAATCAAGAGGGTGCTGAATACAAGAATCATCAGGAGAACGCTTTGTTATTGTATATGGCTTGTACTCATGCTTCTAATCCTGTGTACGCGACTCTTAAATGTCGCATATATTTTTATGACAGTGTGTCGAATTAATAAATTTTGAATTTTATATCATGATCTTCTTGCACTTCAATTGTGCCTTGCATTACATTGTACAATACATGATCAGCAGATCTAATACAAATATTTAAGCTAATAGCCCCTAATTGGTTTACATATTTCATGAACTGATATCTAAATACTCTTAAGAAATGCGATGTCTGAGGTTGTAAACGAGTGAAGATCTTGAAGGTCAGAAAACACTTCAGAATCCCCAACGCCTTCTTGAGGTTGTGGTTGAATCTGACTTGGACCACAATTATGTCGTGTCCCGTCTGGAATGGTCTGCTGTGGTGGTATAGAATTTTGAAATATAGGGGATTCGGCACGTCGGAGGTATAGACGCCACTCATTGACTGAGCTGCAGTGATATTCTCCCCTGTGCGAGAATCCATGGTTGTGGCAGTCAATGCTCAGAAAATAGCTGCAACCGCACCGGAGATCTATCCTCTTCCGCCTGATTGTTGTACGCTTGGTCTGCTTGGCTATCTTGTGTTGTACCTTGATTGGTACCTGCTGAATTGGAGTATAGGGGACTCTCGAGGGTGAAGAACTTGGCATTCTTTTCAGCCCAGGCCTTTAGCTGCTCATTCTTATCCTCATTCAGATATGATTTATAAGAAGAATTATGACCTGGATTGCATAAGAAGATAGTGGGAATGCCACCTTTAATTTGAATTGGTTTCCCGTACTTTGTGTTGCTTTGCCAATCACGTTGGGCCCCCATCAACTCTTTAAAATGCTTTAGGTAGTGGGGGTCAACATCATCAATAATGTTGTACCATGCTGAATTTGAAAATACCTTTGGGGATAGATCGAGGTGCCCACATAGATAATTATGGGGACCCAATCCCCGCGCCCAAATAGTTTTGCCGGTACGACTATCCCCCTCTATTACGATTGAGATTGGTCTCCACGGCCGCGCAGCGGAATCCTTAACATTTTCGTCAACCCAATTCCTTATTTCTTCAGGCACATTGTTGAATGTTGCATTAGCATATGGACTTACATATGGAACAGGTGGCAACTGGAAGATTTTCTCGAGATTTGCTTTCAGATTGTGGTATTGGAATATGTAATCCTTCGGCAGTTTTTCTCGAATTATTGCGAGTGCTGCTTCTGCCGAGTTAGCATTTAATGCATCAGCACATGCATCATTTGCATTTTGACAACCTCCTCTTGCACTTCTACCATCTACTTGGAATTCTCCCCATTTGAGTGTGTCTCCGTCCTTCTCAATGTATGATTTGACATCTGAGCTTGATTTAACTCCCTGAATGTTCGGATGGTAATGTGTTCCCCTGGTTGTGGCTTGAAGATCGAAGAATCGGTTATTCGTGCATGTGAATTTACCTTCGAATTGAATGAGAATGTGGAGATGAGGTTGCCCATCTTCGTGAAGCTCTCTGGCAATTTCTATGAATTTTTTATTCGTGTGTGTTTCAATTGCACGAATTTGAGTGAGGGCTTCTTCTTTAGAGAGGGAACATTTGGGATATGTGAGGAAGTAATTTTTGGCTTGAATTTTGAAGCGACGTGGAGGAGCCATTTATAGAGAGAGAATGTCTCCAATTGCTTTTCAGCTGAAGTCTCTATTGTATTGGAGACAATATATAGTGTCTCCAAATGGCATTATTGTAATTTGTAAAAGTAAGACGCTCCTTCATATCCCATCGTCCACGTGGGATCTTTTGCGGCCATCCGTTTAATATT

Gene Information

NCBI Accession YP_010087830.1
Location 145-510
Gene Name AV2
Protein Name precoat protein
Coding Region ATGTGGGACCCCTTGGAGAATGAATTCCCGGATACCGTTCATGGATTCCGGTGTATGCTCGCCGTCAAATATCTTCTTCTGGTGGAGTCTAAGTATGAGCCGGATACTCTAGGTCGTGATCTCATACGTGATCTTATACGTTGTTTGCGTGCATCGAGTTATAATGAAGCGTCCTGGAGATATAGTAATTTCCACACCCGCTTCCAAAGTTCGGCGTCGTCTGAATTTCGACAGCCCATACTCCGCCCGTGTACCTGTCAGCACTGTCCGTACTTCCAGAAGACGAATATGGGCCTCGCGTCCTATGTACAGAAAGCCCAAGATATACCGGATTTACAGAAGCCCGGATGTTCCAAAGGGCTGTGA
Protein Sequence MWDPLENEFPDTVHGFRCMLAVKYLLLVESKYEPDTLGRDLIRDLIRCLRASSYNEASWRYSNFHTRFQSSASSEFRQPILRPCTCQHCPYFQKTNMGLASYVQKAQDIPDLQKPGCSKGL

NCBI Accession YP_010087831.1
Location 308-1075
Gene Name AV1
Protein Name coat protein
Coding Region ATGAAGCGTCCTGGAGATATAGTAATTTCCACACCCGCTTCCAAAGTTCGGCGTCGTCTGAATTTCGACAGCCCATACTCCGCCCGTGTACCTGTCAGCACTGTCCGTACTTCCAGAAGACGAATATGGGCCTCGCGTCCTATGTACAGAAAGCCCAAGATATACCGGATTTACAGAAGCCCGGATGTTCCAAAGGGCTGTGAAGGTCCGTGTAAAGTTCAATCTTATGAGGCCCGTCATGATGTAAAGCATACTGGTACTGTATTATGTTGCTCCGACGTTACACGTGGTAGTGGTTTGACTCACCGCGTTGGTAAGAGGTTTACTATCAAGTCTATTTACATATTGGGTAAGATCTGGATGGATGAGAATATCAAGAAGAAGAATCACACTAATATTGTCATGTTTTATCTTGTTCGGGATCGTCGGCCGTCTGATAAACCTTATGAATTTGGTTCTGTGTTTAACATGTTTGACAATGAGCCGGCTACTGCGACAGTGAAGATGGATCATCGGGATAGGTTTCAGGTTTTGCATAAGTTTTATGGTTGGGTTACCGGTGGTGAATACGCGTCTAAAGAGCAGGCGATGATTAGGAGGTTTTATAAGATATATCATCCTGTGGTGTACAACAATCAAGAGGGTGCTGAATACAAGAATCATCAGGAGAACGCTTTGTTATTGTATATGGCTTGTACTCATGCTTCTAATCCTGTGTACGCGACTCTTAAATGTCGCATATATTTTTATGACAGTGTGTCGAATTAA
Protein Sequence MKRPGDIVISTPASKVRRRLNFDSPYSARVPVSTVRTSRRRIWASRPMYRKPKIYRIYRSPDVPKGCEGPCKVQSYEARHDVKHTGTVLCCSDVTRGSGLTHRVGKRFTIKSIYILGKIWMDENIKKKNHTNIVMFYLVRDRRPSDKPYEFGSVFNMFDNEPATATVKMDHRDRFQVLHKFYGWVTGGEYASKEQAMIRRFYKIYHPVVYNNQEGAEYKNHQENALLLYMACTHASNPVYATLKCRIYFYDSVSN

NCBI Accession YP_010087832.1
Location 1072-1476
Gene Name AC3
Protein Name replication enhancer protein
Coding Region ATGGATTCTCGCACAGGGGAGAATATCACTGCAGCTCAGTCAATGAGTGGCGTCTATACCTCCGACGTGCCGAATCCCCTATATTTCAAAATTCTATACCACCACAGCAGACCATTCCAGACGGGACACGACATAATTGTGGTCCAAGTCAGATTCAACCACAACCTCAAGAAGGCGTTGGGGATTCTGAAGTGTTTTCTGACCTTCAAGATCTTCACTCGTTTACAACCTCAGACATCGCATTTCTTAAGAGTATTTAGATATCAGTTCATGAAATATGTAAACCAATTAGGGGCTATTAGCTTAAATATTTGTATTAGATCTGCTGATCATGTATTGTACAATGTAATGCAAGGCACAATTGAAGTGCAAGAAGATCATGATATAAAATTCAAAATTTATTAA
Protein Sequence MDSRTGENITAAQSMSGVYTSDVPNPLYFKILYHHSRPFQTGHDIIVVQVRFNHNLKKALGILKCFLTFKIFTRLQPQTSHFLRVFRYQFMKYVNQLGAISLNICIRSADHVLYNVMQGTIEVQEDHDIKFKIY

NCBI Accession YP_010087833.1
Location 1217-1642
Gene Name AC2
Protein Name transactivator protein
Coding Region ATGCCAAGTTCTTCACCCTCGAGAGTCCCCTATACTCCAATTCAGCAGGTACCAATCAAGGTACAACACAAGATAGCCAAGCAGACCAAGCGTACAACAATCAGGCGGAAGAGGATAGATCTCCGGTGCGGTTGCAGCTATTTTCTGAGCATTGACTGCCACAACCATGGATTCTCGCACAGGGGAGAATATCACTGCAGCTCAGTCAATGAGTGGCGTCTATACCTCCGACGTGCCGAATCCCCTATATTTCAAAATTCTATACCACCACAGCAGACCATTCCAGACGGGACACGACATAATTGTGGTCCAAGTCAGATTCAACCACAACCTCAAGAAGGCGTTGGGGATTCTGAAGTGTTTTCTGACCTTCAAGATCTTCACTCGTTTACAACCTCAGACATCGCATTTCTTAAGAGTATTTAG
Protein Sequence MPSSSPSRVPYTPIQQVPIKVQHKIAKQTKRTTIRRKRIDLRCGCSYFLSIDCHNHGFSHRGEYHCSSVNEWRLYLRRAESPIFQNSIPPQQTIPDGTRHNCGPSQIQPQPQEGVGDSEVFSDLQDLHSFTTSDIAFLKSI

NCBI Accession YP_010087834.1
Location 1488-2630
Gene Name AC1
Protein Name replication associated protein
Coding Region ATGGCTCCTCCACGTCGCTTCAAAATTCAAGCCAAAAATTACTTCCTCACATATCCCAAATGTTCCCTCTCTAAAGAAGAAGCCCTCACTCAAATTCGTGCAATTGAAACACACACGAATAAAAAATTCATAGAAATTGCCAGAGAGCTTCACGAAGATGGGCAACCTCATCTCCACATTCTCATTCAATTCGAAGGTAAATTCACATGCACGAATAACCGATTCTTCGATCTTCAAGCCACAACCAGGGGAACACATTACCATCCGAACATTCAGGGAGTTAAATCAAGCTCAGATGTCAAATCATACATTGAGAAGGACGGAGACACACTCAAATGGGGAGAATTCCAAGTAGATGGTAGAAGTGCAAGAGGAGGTTGTCAAAATGCAAATGATGCATGTGCTGATGCATTAAATGCTAACTCGGCAGAAGCAGCACTCGCAATAATTCGAGAAAAACTGCCGAAGGATTACATATTCCAATACCACAATCTGAAAGCAAATCTCGAGAAAATCTTCCAGTTGCCACCTGTTCCATATGTAAGTCCATATGCTAATGCAACATTCAACAATGTGCCTGAAGAAATAAGGAATTGGGTTGACGAAAATGTTAAGGATTCCGCTGCGCGGCCGTGGAGACCAATCTCAATCGTAATAGAGGGGGATAGTCGTACCGGCAAAACTATTTGGGCGCGGGGATTGGGTCCCCATAATTATCTATGTGGGCACCTCGATCTATCCCCAAAGGTATTTTCAAATTCAGCATGGTACAACATTATTGATGATGTTGACCCCCACTACCTAAAGCATTTTAAAGAGTTGATGGGGGCCCAACGTGATTGGCAAAGCAACACAAAGTACGGGAAACCAATTCAAATTAAAGGTGGCATTCCCACTATCTTCTTATGCAATCCAGGTCATAATTCTTCTTATAAATCATATCTGAATGAGGATAAGAATGAGCAGCTAAAGGCCTGGGCTGAAAAGAATGCCAAGTTCTTCACCCTCGAGAGTCCCCTATACTCCAATTCAGCAGGTACCAATCAAGGTACAACACAAGATAGCCAAGCAGACCAAGCGTACAACAATCAGGCGGAAGAGGATAGATCTCCGGTGCGGTTGCAGCTATTTTCTGAGCATTGA
Protein Sequence MAPPRRFKIQAKNYFLTYPKCSLSKEEALTQIRAIETHTNKKFIEIARELHEDGQPHLHILIQFEGKFTCTNNRFFDLQATTRGTHYHPNIQGVKSSSDVKSYIEKDGDTLKWGEFQVDGRSARGGCQNANDACADALNANSAEAALAIIREKLPKDYIFQYHNLKANLEKIFQLPPVPYVSPYANATFNNVPEEIRNWVDENVKDSAARPWRPISIVIEGDSRTGKTIWARGLGPHNYLCGHLDLSPKVFSNSAWYNIIDDVDPHYLKHFKELMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGHNSSYKSYLNEDKNEQLKAWAEKNAKFFTLESPLYSNSAGTNQGTTQDSQADQAYNNQAEEDRSPVRLQLFSEH

NCBI Accession YP_010087835.1
Location 2276-2473
Gene Name AC4
Protein Name AC4 protein
Coding Region ATGGGCAACCTCATCTCCACATTCTCATTCAATTCGAAGGTAAATTCACATGCACGAATAACCGATTCTTCGATCTTCAAGCCACAACCAGGGGAACACATTACCATCCGAACATTCAGGGAGTTAAATCAAGCTCAGATGTCAAATCATACATTGAGAAGGACGGAGACACACTCAAATGGGGAGAATTCCAAGTAG
Protein Sequence MGNLISTFSFNSKVNSHARITDSSIFKPQPGEHITIRTFRELNQAQMSNHTLRRTETHSNGENSK