Ocimum golden mosaic virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_018589025.1
Isolate Uganda
Release date 2021/6/1
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_055591
ACCGGATGGCCGCGCCCCTTTGCTGCGTGGGCCCCCCTCCTCTTTTATGTCGCCCAATCATATTGGTGCCTGAATGCCTATATACGTCATTTGTCTGTATATACGTGGCGCCCAAGTATTGGTGTATTGTAAGATGTGGGATCCTCTCTTGAATGATTTCCCTGAAACGGCTCATGCCTTCCGTTCTATGCTTGCCGTGAAATACTTGCAGTGTATAGAACAAACGTATGAACCTGGTACATTGGGTCACGATTTAATTCGAGATCTTATTTTGGTTATTCGAGCTAAAGATTATGTCGAAGCGACCAGGAGATATAATCATTTCCACGCCCGTATCGAAGGTGCGTCGAAGGCTGAACTTCGACAGCCCCTATACCAACCGTGTTGCTGTCCCCACTGCCCGAGGCATAGGCAGACAGCGTCTATGGAAGTATCGGCCCATGTATCGAAAGCCCAGGATGTACAAAATGTACAAAAGTCGTGATGTTCCTATGGGCTGTGAAGGCCCATGTAAGGTTCAGTCTTATGAACAAAGGGATGATGTGAAGCATACTGGTACTGTCCGTTGTGTTAGTGATGTTACTCGTGGAACTGGTGACACTCATCGAGTTGGCAAGAGATTTTGTATTAAATCCATTTACATTTTGGGTAAGATATGGATGGATGAGAACATTAAGAAGCAGAATCACACTAATCAGGTTATTTTCTTTTTAGTCCGTGATAGAAGGCCCAATGGAGCAAGCCCAATGGATTTTGGACAGGTTTTTAATATGTTTGATAATGAGCCTAGTACTGCGACTGTGAAGAACTATCTCCGTGATAGATACCAGGTTGTGAGGAGATTCTATGCAACCGTTGTTGGTGGACCTTCTGGCGTTAGAGAGCAGGCTTTGATCAAGAGATTTGTTCATGTTACTAATCATGTAGTTTATAATAATCAAGTAGAGGCTAAGTATGAGAATCATACTGAGAATGCCTTGTTGTTGTATATGGCGTGTACTCATGCCTCTAATCCAGTGTATGCTACTCTGAAAATACGCATCTATTTTTATGATGCAGTCACGAATTAATAAATATTGAATTTTATTTCATGGTTCTCCTTAACTTGGAGTGTGTTTACAATTACATTGTACAGTACATGATCCACTGCTCTGATGACATTGTTAATTGAAATAACGCCTAAGCTATCTAAATATTTAAGAACTTGAAACTTAAAGACTCTTAAGAAATGACCAATCCGAGGCTGTAAGGTCGTCCAGACCTGGAAATTCAGAAAACATTTGTGAATCCCCAACTCCTTCCTCATGTTGTGGTTGAACCTTATCTGGACTGATATGATGTCGTGGTTGTTGTTGAATGGTCTCTTGTCGTGGTGGGTTATTGTGAAATATAGGGGGTTGTTTATCTGCCAGATAAAAACGCCATTCCTTGCTTGAGGTGCAGTGATGAGTTCCCCTGTGCGTAAATCCATGGTTGATGCAGTCTATGTGTAGGTAGTATGAACAGCCGCAGTGTAGGTCGATACGTTTACGACGGATGGCCTTCTTCTTGGCTATTCTGTGTTGGACCTTGATGGGCACTTGAGTAGAGTGGCTCGTTGAGGGTGACGAAGGTTGCATTCTTGATAGCCCAGGCTTTGAGTGGTGTGTTTTTTTCCTCGTCGAGATATTCTTTATATGATGATGTTGGTCCTGGATTGCAGAGGAAGATAGTGGGAATGCCCCCTTTAATTTGAATTGGTTTGCCGTACTTTGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATGAACTCTTTAAAGTGTTTCAGATAATGCGGGTCTACGTCATCAATGACGTTGTACCAGGCATCGTTGCTGTAAACCTTCGGACTCAGATCTAAATGGCCACACAAATAATTGTGAGGTCCTAATGACCTCGCCCACATGGTCTTGCCGGTTCGACTATCACCCTCTACTACAATACTAATAGGCCTCCACGGCCGCGCAGCGGGTGTCTTGATATTTTCTGATACCCATTCCTCAAGTTCTTCTGGAACTTGATTAAAAGACGAACATAAAAATGGAGATACATAAGGAGTCGGGGGCTCCTGGAAAATTCTATCTAGATTGCTATTTAAATTATGAAATTGTAAAACAAAATCCTTTGGGGCTAATTCCTTTAATACGTTGAGAGCCTCCGATTTACTTCCTGAGTTAAGAGCTCTGGCGTAAGCGTCATTTGCTGATTGTTGCCCTCCCCTTGCGGATCTTCCATCGATCTGAAACTCGCCCCATTCGATGGTGTCTCCGTCCTTGTCCAGATATGACTTGACATCGGAACTGGACTTAGCGCCCTGTATGTTGGGGTGGAAACAGGTGCTACTGCTTGGGTGTATGTAATCGAACAGCCGATTATTCGTAATCGTAATCTTCCCCTCGAATTGGATGAGGGCGTGCAAATGAGGTTGCCCATCTTGGTGTAATTCTTTGCAGATCTTGATGAATTTTGGGTTTGATGCTAAGGATAACCCTTTTATGAATTGTAACAACAATTCTTTGGGCAATTGGCATTTGGGGTAAGTGAGAAATATGTTTTTCGCTTGAATTTTAAATCTAGGGTTCCTCATTTTGACCTGGTCAATTGGAGACACCCCGCTTCATGTCTCTTGTGTATTGGAGACAATATATAGTGTCTCTAAATGGCATAATTGTAAATATGAAATTATCAACTTTTACTTTAATTCAAATTCAAAAGCGGCCATCCGCATTAATATT

Gene Information

NCBI Accession YP_010087818.1
Location 74-484
Gene Name AV2
Protein Name precoat protein
Coding Region ATGCCTATATACGTCATTTGTCTGTATATACGTGGCGCCCAAGTATTGGTGTATTGTAAGATGTGGGATCCTCTCTTGAATGATTTCCCTGAAACGGCTCATGCCTTCCGTTCTATGCTTGCCGTGAAATACTTGCAGTGTATAGAACAAACGTATGAACCTGGTACATTGGGTCACGATTTAATTCGAGATCTTATTTTGGTTATTCGAGCTAAAGATTATGTCGAAGCGACCAGGAGATATAATCATTTCCACGCCCGTATCGAAGGTGCGTCGAAGGCTGAACTTCGACAGCCCCTATACCAACCGTGTTGCTGTCCCCACTGCCCGAGGCATAGGCAGACAGCGTCTATGGAAGTATCGGCCCATGTATCGAAAGCCCAGGATGTACAAAATGTACAAAAGTCGTGA
Protein Sequence MPIYVICLYIRGAQVLVYCKMWDPLLNDFPETAHAFRSMLAVKYLQCIEQTYEPGTLGHDLIRDLILVIRAKDYVEATRRYNHFHARIEGASKAELRQPLYQPCCCPHCPRHRQTASMEVSAHVSKAQDVQNVQKS

NCBI Accession YP_010087819.1
Location 294-1070
Gene Name AV1
Protein Name coat protein
Coding Region ATGTCGAAGCGACCAGGAGATATAATCATTTCCACGCCCGTATCGAAGGTGCGTCGAAGGCTGAACTTCGACAGCCCCTATACCAACCGTGTTGCTGTCCCCACTGCCCGAGGCATAGGCAGACAGCGTCTATGGAAGTATCGGCCCATGTATCGAAAGCCCAGGATGTACAAAATGTACAAAAGTCGTGATGTTCCTATGGGCTGTGAAGGCCCATGTAAGGTTCAGTCTTATGAACAAAGGGATGATGTGAAGCATACTGGTACTGTCCGTTGTGTTAGTGATGTTACTCGTGGAACTGGTGACACTCATCGAGTTGGCAAGAGATTTTGTATTAAATCCATTTACATTTTGGGTAAGATATGGATGGATGAGAACATTAAGAAGCAGAATCACACTAATCAGGTTATTTTCTTTTTAGTCCGTGATAGAAGGCCCAATGGAGCAAGCCCAATGGATTTTGGACAGGTTTTTAATATGTTTGATAATGAGCCTAGTACTGCGACTGTGAAGAACTATCTCCGTGATAGATACCAGGTTGTGAGGAGATTCTATGCAACCGTTGTTGGTGGACCTTCTGGCGTTAGAGAGCAGGCTTTGATCAAGAGATTTGTTCATGTTACTAATCATGTAGTTTATAATAATCAAGTAGAGGCTAAGTATGAGAATCATACTGAGAATGCCTTGTTGTTGTATATGGCGTGTACTCATGCCTCTAATCCAGTGTATGCTACTCTGAAAATACGCATCTATTTTTATGATGCAGTCACGAATTAA
Protein Sequence MSKRPGDIIISTPVSKVRRRLNFDSPYTNRVAVPTARGIGRQRLWKYRPMYRKPRMYKMYKSRDVPMGCEGPCKVQSYEQRDDVKHTGTVRCVSDVTRGTGDTHRVGKRFCIKSIYILGKIWMDENIKKQNHTNQVIFFLVRDRRPNGASPMDFGQVFNMFDNEPSTATVKNYLRDRYQVVRRFYATVVGGPSGVREQALIKRFVHVTNHVVYNNQVEAKYENHTENALLLYMACTHASNPVYATLKIRIYFYDAVTN

NCBI Accession YP_010087820.1
Location 1067-1471
Gene Name AC3
Protein Name replication enhancer protein
Coding Region ATGGATTTACGCACAGGGGAACTCATCACTGCACCTCAAGCAAGGAATGGCGTTTTTATCTGGCAGATAAACAACCCCCTATATTTCACAATAACCCACCACGACAAGAGACCATTCAACAACAACCACGACATCATATCAGTCCAGATAAGGTTCAACCACAACATGAGGAAGGAGTTGGGGATTCACAAATGTTTTCTGAATTTCCAGGTCTGGACGACCTTACAGCCTCGGATTGGTCATTTCTTAAGAGTCTTTAAGTTTCAAGTTCTTAAATATTTAGATAGCTTAGGCGTTATTTCAATTAACAATGTCATCAGAGCAGTGGATCATGTACTGTACAATGTAATTGTAAACACACTCCAAGTTAAGGAGAACCATGAAATAAAATTCAATATTTATTAA
Protein Sequence MDLRTGELITAPQARNGVFIWQINNPLYFTITHHDKRPFNNNHDIISVQIRFNHNMRKELGIHKCFLNFQVWTTLQPRIGHFLRVFKFQVLKYLDSLGVISINNVIRAVDHVLYNVIVNTLQVKENHEIKFNIY

NCBI Accession YP_010087821.1
Location 1212-1619
Gene Name AC2
Protein Name transactivator protein
Coding Region ATGCAACCTTCGTCACCCTCAACGAGCCACTCTACTCAAGTGCCCATCAAGGTCCAACACAGAATAGCCAAGAAGAAGGCCATCCGTCGTAAACGTATCGACCTACACTGCGGCTGTTCATACTACCTACACATAGACTGCATCAACCATGGATTTACGCACAGGGGAACTCATCACTGCACCTCAAGCAAGGAATGGCGTTTTTATCTGGCAGATAAACAACCCCCTATATTTCACAATAACCCACCACGACAAGAGACCATTCAACAACAACCACGACATCATATCAGTCCAGATAAGGTTCAACCACAACATGAGGAAGGAGTTGGGGATTCACAAATGTTTTCTGAATTTCCAGGTCTGGACGACCTTACAGCCTCGGATTGGTCATTTCTTAAGAGTCTTTAA
Protein Sequence MQPSSPSTSHSTQVPIKVQHRIAKKKAIRRKRIDLHCGCSYYLHIDCINHGFTHRGTHHCTSSKEWRFYLADKQPPIFHNNPPRQETIQQQPRHHISPDKVQPQHEEGVGDSQMFSEFPGLDDLTASDWSFLKSL

NCBI Accession YP_010087822.1
Location 1528-2604
Gene Name AC1
Protein Name replication associated protein
Coding Region ATGAGGAACCCTAGATTTAAAATTCAAGCGAAAAACATATTTCTCACTTACCCCAAATGCCAATTGCCCAAAGAATTGTTGTTACAATTCATAAAAGGGTTATCCTTAGCATCAAACCCAAAATTCATCAAGATCTGCAAAGAATTACACCAAGATGGGCAACCTCATTTGCACGCCCTCATCCAATTCGAGGGGAAGATTACGATTACGAATAATCGGCTGTTCGATTACATACACCCAAGCAGTAGCACCTGTTTCCACCCCAACATACAGGGCGCTAAGTCCAGTTCCGATGTCAAGTCATATCTGGACAAGGACGGAGACACCATCGAATGGGGCGAGTTTCAGATCGATGGAAGATCCGCAAGGGGAGGGCAACAATCAGCAAATGACGCTTACGCCAGAGCTCTTAACTCAGGAAGTAAATCGGAGGCTCTCAACGTATTAAAGGAATTAGCCCCAAAGGATTTTGTTTTACAATTTCATAATTTAAATAGCAATCTAGATAGAATTTTCCAGGAGCCCCCGACTCCTTATGTATCTCCATTTTTATGTTCGTCTTTTAATCAAGTTCCAGAAGAACTTGAGGAATGGGTATCAGAAAATATCAAGACACCCGCTGCGCGGCCGTGGAGGCCTATTAGTATTGTAGTAGAGGGTGATAGTCGAACCGGCAAGACCATGTGGGCGAGGTCATTAGGACCTCACAATTATTTGTGTGGCCATTTAGATCTGAGTCCGAAGGTTTACAGCAACGATGCCTGGTACAACGTCATTGATGACGTAGACCCGCATTATCTGAAACACTTTAAAGAGTTCATGGGGGCCCAAAGGGACTGGCAAAGCAACACAAAGTACGGCAAACCAATTCAAATTAAAGGGGGCATTCCCACTATCTTCCTCTGCAATCCAGGACCAACATCATCATATAAAGAATATCTCGACGAGGAAAAAAACACACCACTCAAAGCCTGGGCTATCAAGAATGCAACCTTCGTCACCCTCAACGAGCCACTCTACTCAAGTGCCCATCAAGGTCCAACACAGAATAGCCAAGAAGAAGGCCATCCGTCGTAA
Protein Sequence MRNPRFKIQAKNIFLTYPKCQLPKELLLQFIKGLSLASNPKFIKICKELHQDGQPHLHALIQFEGKITITNNRLFDYIHPSSSTCFHPNIQGAKSSSDVKSYLDKDGDTIEWGEFQIDGRSARGGQQSANDAYARALNSGSKSEALNVLKELAPKDFVLQFHNLNSNLDRIFQEPPTPYVSPFLCSSFNQVPEELEEWVSENIKTPAARPWRPISIVVEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNTPLKAWAIKNATFVTLNEPLYSSAHQGPTQNSQEEGHPS

NCBI Accession YP_010087823.1
Location 2157-2450
Gene Name AC4
Protein Name AC4 protein
Coding Region ATGGGCAACCTCATTTGCACGCCCTCATCCAATTCGAGGGGAAGATTACGATTACGAATAATCGGCTGTTCGATTACATACACCCAAGCAGTAGCACCTGTTTCCACCCCAACATACAGGGCGCTAAGTCCAGTTCCGATGTCAAGTCATATCTGGACAAGGACGGAGACACCATCGAATGGGGCGAGTTTCAGATCGATGGAAGATCCGCAAGGGGAGGGCAACAATCAGCAAATGACGCTTACGCCAGAGCTCTTAACTCAGGAAGTAAATCGGAGGCTCTCAACGTATTAA
Protein Sequence MGNLICTPSSNSRGRLRLRIIGCSITYTQAVAPVSTPTYRALSPVPMSSHIWTRTETPSNGASFRSMEDPQGEGNNQQMTLTPELLTQEVNRRLSTY