Mesta yellow vein mosaic Bahraich virus
Basic Information
Genus |
Begomovirus
|
NCBI Assembly |
GCF_000879475.1 |
Isolate |
India: North India, Bahraich |
Release date |
2015/2/22 |
Submitter |
Das,S., Ghosh,R., Paul,S., Roy,A., Ghosh,S.K., Das,A., Palit,P., Acharyya,S., Mir,J.I. |
Host |
|
Vector |
|
Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCGCGATTTTTTTAAGTGTGGGTCCAGAACGCACCACGATGCAGACTCAAAGCTTAGATACGCTCCTTCGGCTATAAGTACTTGCGACTAAGTTTCAATTCAAAAATGTGGGATCCACTATTAAACGAATTTCCGGATACGGTGCACGGGTTTCGGTGTATGCTTTCTGTCAAATATTTGCAACTTTTATCGCAGGATTATTCACCGGATACACTTGGTTACGAGTTAATACGGGATTTAATCTGTATTTTACGCTCTCGTAATTATGTCGAAGCGAGCTGCAGATATCGTCATTTCTACGCCCGCGTCGAAAGTACGTCGGCGTCTGAACTTCGGCAGCCCATACACCAGCCGTGTTGCTGCCCCCATTGTCCGCGTCACAAAGCAACAGGCATGGACAAACAGACCTATGAACAGGAAGCCCAGAATGTATCGGATGTACAGAAGTCCGGATGTTCCAAGGGGTTGTGAGGGTCCCTGTAAGGTACAATCGTTTGTGTCGACACCTGATGTTGTCCATATTGGTAAGGTGATGTGTATTTCTGATGTTACGCGTGGAGTCGGTTTGACCCATCGTATTGGTAAACGTTTTTGTGTCAAGTCAGTTTATGTTTTAGGTAAGATATGGATGGATGAAAATATAAAGACCAAGAATCACACGAATTCTGTGATGTTCTTCTTAGTCCGCGACCGTCGTCCTGTTGACAAACCTCAGGATTTTGGTGAGGTATTCAATATGTTTGACAACGAACCCAGTACAGCAACTGTGAAGAATAGTCATAGGGATCGTTACCAGGTGTTGAGGAAATGGCATGCAACCGTCACGGGTGGTCAATATGCGAGTAATGAACATGCTTTGGTCAAGAAGTTTGTCAGAGTTAACAATTATGTTGTTTACAACCAGCAGGAGGCAGGAAAATACGAGAATCACACCGAGAATGCATTGATGCTTTATATGGCTTGTACCCATGCTAGTAACCCTGTTTATGCTCCGCTTAAGATTCGGATTTATTTTTATGACTCTGTAACGAATTGAAATTAATAAAGTTTGAATTTTATATCTGAATATTGGTCTACATACATTGTTTGATTAATTACATTGTACAATACATGTTCAACGGCTTTAATAACTAAATTAAGTGAGATTACACCGAGATTGTTGAGATACTTGAGTACTTGGGTTTTGAATACCCTTAAGAAAAGACCAGTCGGAGGGTGTAAGGTCGTCCAGATTCGGAAGGTTAGAAAACACTTGTGCACTCCCAGAGCTTTTCGAAGGTTGTAGTTGATATGGATCCTCATTGTTATGATGTCCATGTTCGTCGTGAATGGACGGTTGTCGTGGCTGAGGATTTTGAAATATAGGGGATTTGGAACCTCCCAGATAAAGACGCCATCCGTTGAATGAGCTGCAGTGATGCGTTCCCCTGTGCGAGAATCCATGGTTGTGGCAGTTGATACTTAGGTAATAGCTGCATCCACACTCAAGGTCCACTCGTTTCCTCCTGTTGCGCCTCTTCGCTTCCCTGTGTTGAACTTTGATTGGTACCGGAGTAGAGCGGTTGGGTGAGAAAGACGAATGTTGCATTTTTTAAAGCCCAGGATTTTAATGCTGAGTTCTTATCCTCGTCTAAGAACTCTTTATAACTTGCATTGGGCCCTGGATTGCAGAGGAAGATTGTTGGTATTCCGCCTTTAATTTGAACTGGCTTCCCGTACTTTGTGTTGGATTGCCAGTCCCTTTGGGCCCCCATGAACTCTTTAAAGTGTTTGAGGTAGTGCGGATCGACGTCATCAATGACGTTATACCATGCGTCGTTACTGTACACCTTTGGGCTAAGATCTAAATGCCCACATAGATAGTTGTGTGGGCCTAAAGACCTAGCCCACATAGTCTTCCCAGTACGACTATCTCCCTCAATTACTATACTTTGAGGTCTAAGGGGCCGCGCAGCGGCGTCAACAACATTCTCCGACGCCCACTCTTCAAGTTCTTCTGGAACTTGATCGAAAGAAGAAGACGAAAAAGGAGAAACATAAGGAGCTGGTGGCTCCTGAAAGATTCTGTTTAAATTTGCATTTAAATTATGAAATTGCAGTACAAAATCTTTAGGAGCCAGTTCCTTAATGACTCTAATAGCCTCCGACTTACTTCCCGCGTTAAGTGCTGCGGCGTAAGCGTCATTGGCTGTCTGTTGCCCTCCTCTTGCTGACCTTCCGTCGATCTGAAATTGTCCCCAGTCGAGAATGTCCCCGTCCTTCTCGATGTAGGACTTGACGTCGGAGCTGGATTTAGCTCCCTGTATGTTTGGTCGGAAATGTGCTGACCAGCTTGGGGAGACCAAGTCGAAGAATCGCATATTCTGGCACTTGAATTTCCCTTCGAACTGGATGAGAACTCGCACGCGAGGAGTCCCATCTTCGTGAAGCTCTCTGCAGATTCTAATATATTTTTTTGAAGTTGGGGTTTGGAGATTTAATAATTGGGAAAGTGCTTCCTCTTTGGTGAGAGAACATTTGGGATAAGTGACGAAATAGTCTTTGGAATAAATACCGTTACGCCTTGGAGGCATGTTGACTAGAATTGATCACCGATTGACCGCTCTTGCAACTCTCTCCTGTATATCGGTGATCAATATATAGTGATCACCAAATGGCATAATGGTAATAAAACAACTTTAATTTGAAATTCAAAAAAAAATTTTTGCGGCCATCCGCTTAATATT
Gene Information
NCBI Accession
|
YP_001955938.1
|
Location
|
117-482 |
Gene Name
|
AV2 |
Protein Name
|
AV2 |
Coding Region
|
ATGTGGGATCCACTATTAAACGAATTTCCGGATACGGTGCACGGGTTTCGGTGTATGCTTTCTGTCAAATATTTGCAACTTTTATCGCAGGATTATTCACCGGATACACTTGGTTACGAGTTAATACGGGATTTAATCTGTATTTTACGCTCTCGTAATTATGTCGAAGCGAGCTGCAGATATCGTCATTTCTACGCCCGCGTCGAAAGTACGTCGGCGTCTGAACTTCGGCAGCCCATACACCAGCCGTGTTGCTGCCCCCATTGTCCGCGTCACAAAGCAACAGGCATGGACAAACAGACCTATGAACAGGAAGCCCAGAATGTATCGGATGTACAGAAGTCCGGATGTTCCAAGGGGTTGTGA |
Protein Sequence
|
MWDPLLNEFPDTVHGFRCMLSVKYLQLLSQDYSPDTLGYELIRDLICILRSRNYVEASCRYRHFYARVESTSASELRQPIHQPCCCPHCPRHKATGMDKQTYEQEAQNVSDVQKSGCSKGL |
NCBI Accession
|
YP_001955939.1
|
Location
|
181-585 |
Gene Name
|
AC5 |
Protein Name
|
AC5 |
Coding Region
|
ATGGGTCAAACCGACTCCACGCGTAACATCAGAAATACACATCACCTTACCAATATGGACAACATCAGGTGTCGACACAAACGATTGTACCTTACAGGGACCCTCACAACCCCTTGGAACATCCGGACTTCTGTACATCCGATACATTCTGGGCTTCCTGTTCATAGGTCTGTTTGTCCATGCCTGTTGCTTTGTGACGCGGACAATGGGGGCAGCAACACGGCTGGTGTATGGGCTGCCGAAGTTCAGACGCCGACGTACTTTCGACGCGGGCGTAGAAATGACGATATCTGCAGCTCGCTTCGACATAATTACGAGAGCGTAAAATACAGATTAAATCCCGTATTAACTCGTAACCAAGTGTATCCGGTGAATAATCCTGCGATAAAAGTTGCAAATATTTGA |
Protein Sequence
|
MGQTDSTRNIRNTHHLTNMDNIRCRHKRLYLTGTLTTPWNIRTSVHPIHSGLPVHRSVCPCLLLCDADNGGSNTAGVWAAEVQTPTYFRRGRRNDDICSSLRHNYESVKYRLNPVLTRNQVYPVNNPAIKVANI |
NCBI Accession
|
YP_001955940.1
|
Location
|
277-1047 |
Gene Name
|
AV1 |
Protein Name
|
coat protein |
Coding Region
|
ATGTCGAAGCGAGCTGCAGATATCGTCATTTCTACGCCCGCGTCGAAAGTACGTCGGCGTCTGAACTTCGGCAGCCCATACACCAGCCGTGTTGCTGCCCCCATTGTCCGCGTCACAAAGCAACAGGCATGGACAAACAGACCTATGAACAGGAAGCCCAGAATGTATCGGATGTACAGAAGTCCGGATGTTCCAAGGGGTTGTGAGGGTCCCTGTAAGGTACAATCGTTTGTGTCGACACCTGATGTTGTCCATATTGGTAAGGTGATGTGTATTTCTGATGTTACGCGTGGAGTCGGTTTGACCCATCGTATTGGTAAACGTTTTTGTGTCAAGTCAGTTTATGTTTTAGGTAAGATATGGATGGATGAAAATATAAAGACCAAGAATCACACGAATTCTGTGATGTTCTTCTTAGTCCGCGACCGTCGTCCTGTTGACAAACCTCAGGATTTTGGTGAGGTATTCAATATGTTTGACAACGAACCCAGTACAGCAACTGTGAAGAATAGTCATAGGGATCGTTACCAGGTGTTGAGGAAATGGCATGCAACCGTCACGGGTGGTCAATATGCGAGTAATGAACATGCTTTGGTCAAGAAGTTTGTCAGAGTTAACAATTATGTTGTTTACAACCAGCAGGAGGCAGGAAAATACGAGAATCACACCGAGAATGCATTGATGCTTTATATGGCTTGTACCCATGCTAGTAACCCTGTTTATGCTCCGCTTAAGATTCGGATTTATTTTTATGACTCTGTAACGAATTGA |
Protein Sequence
|
MSKRAADIVISTPASKVRRRLNFGSPYTSRVAAPIVRVTKQQAWTNRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFVSTPDVVHIGKVMCISDVTRGVGLTHRIGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEPSTATVKNSHRDRYQVLRKWHATVTGGQYASNEHALVKKFVRVNNYVVYNQQEAGKYENHTENALMLYMACTHASNPVYAPLKIRIYFYDSVTN |
NCBI Accession
|
YP_001955941.1
|
Location
|
1050-1454 |
Gene Name
|
AC3 |
Protein Name
|
replication enhancer protein |
Coding Region
|
ATGGATTCTCGCACAGGGGAACGCATCACTGCAGCTCATTCAACGGATGGCGTCTTTATCTGGGAGGTTCCAAATCCCCTATATTTCAAAATCCTCAGCCACGACAACCGTCCATTCACGACGAACATGGACATCATAACAATGAGGATCCATATCAACTACAACCTTCGAAAAGCTCTGGGAGTGCACAAGTGTTTTCTAACCTTCCGAATCTGGACGACCTTACACCCTCCGACTGGTCTTTTCTTAAGGGTATTCAAAACCCAAGTACTCAAGTATCTCAACAATCTCGGTGTAATCTCACTTAATTTAGTTATTAAAGCCGTTGAACATGTATTGTACAATGTAATTAATCAAACAATGTATGTAGACCAATATTCAGATATAAAATTCAAACTTTATTAA |
Protein Sequence
|
MDSRTGERITAAHSTDGVFIWEVPNPLYFKILSHDNRPFTTNMDIITMRIHINYNLRKALGVHKCFLTFRIWTTLHPPTGLFLRVFKTQVLKYLNNLGVISLNLVIKAVEHVLYNVINQTMYVDQYSDIKFKLY |
NCBI Accession
|
YP_001955942.1
|
Location
|
1147-1599 |
Gene Name
|
AC2 |
Protein Name
|
transcription activator protein |
Coding Region
|
ATGCAACATTCGTCTTTCTCACCCAACCGCTCTACTCCGGTACCAATCAAAGTTCAACACAGGGAAGCGAAGAGGCGCAACAGGAGGAAACGAGTGGACCTTGAGTGTGGATGCAGCTATTACCTAAGTATCAACTGCCACAACCATGGATTCTCGCACAGGGGAACGCATCACTGCAGCTCATTCAACGGATGGCGTCTTTATCTGGGAGGTTCCAAATCCCCTATATTTCAAAATCCTCAGCCACGACAACCGTCCATTCACGACGAACATGGACATCATAACAATGAGGATCCATATCAACTACAACCTTCGAAAAGCTCTGGGAGTGCACAAGTGTTTTCTAACCTTCCGAATCTGGACGACCTTACACCCTCCGACTGGTCTTTTCTTAAGGGTATTCAAAACCCAAGTACTCAAGTATCTCAACAATCTCGGTGTAATCTCACTTAA |
Protein Sequence
|
MQHSSFSPNRSTPVPIKVQHREAKRRNRRKRVDLECGCSYYLSINCHNHGFSHRGTHHCSSFNGWRLYLGGSKSPIFQNPQPRQPSIHDEHGHHNNEDPYQLQPSKSSGSAQVFSNLPNLDDLTPSDWSFLKGIQNPSTQVSQQSRCNLT |
NCBI Accession
|
YP_001955943.1
|
Location
|
1496-2584 |
Gene Name
|
AC1 |
Protein Name
|
replication initiator protein |
Coding Region
|
ATGCCTCCAAGGCGTAACGGTATTTATTCCAAAGACTATTTCGTCACTTATCCCAAATGTTCTCTCACCAAAGAGGAAGCACTTTCCCAATTATTAAATCTCCAAACCCCAACTTCAAAAAAATATATTAGAATCTGCAGAGAGCTTCACGAAGATGGGACTCCTCGCGTGCGAGTTCTCATCCAGTTCGAAGGGAAATTCAAGTGCCAGAATATGCGATTCTTCGACTTGGTCTCCCCAAGCTGGTCAGCACATTTCCGACCAAACATACAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGAGAAGGACGGGGACATTCTCGACTGGGGACAATTTCAGATCGACGGAAGGTCAGCAAGAGGAGGGCAACAGACAGCCAATGACGCTTACGCCGCAGCACTTAACGCGGGAAGTAAGTCGGAGGCTATTAGAGTCATTAAGGAACTGGCTCCTAAAGATTTTGTACTGCAATTTCATAATTTAAATGCAAATTTAAACAGAATCTTTCAGGAGCCACCAGCTCCTTATGTTTCTCCTTTTTCGTCTTCTTCTTTCGATCAAGTTCCAGAAGAACTTGAAGAGTGGGCGTCGGAGAATGTTGTTGACGCCGCTGCGCGGCCCCTTAGACCTCAAAGTATAGTAATTGAGGGAGATAGTCGTACTGGGAAGACTATGTGGGCTAGGTCTTTAGGCCCACACAACTATCTATGTGGGCATTTAGATCTTAGCCCAAAGGTGTACAGTAACGACGCATGGTATAACGTCATTGATGACGTCGATCCGCACTACCTCAAACACTTTAAAGAGTTCATGGGGGCCCAAAGGGACTGGCAATCCAACACAAAGTACGGGAAGCCAGTTCAAATTAAAGGCGGAATACCAACAATCTTCCTCTGCAATCCAGGGCCCAATGCAAGTTATAAAGAGTTCTTAGACGAGGATAAGAACTCAGCATTAAAATCCTGGGCTTTAAAAAATGCAACATTCGTCTTTCTCACCCAACCGCTCTACTCCGGTACCAATCAAAGTTCAACACAGGGAAGCGAAGAGGCGCAACAGGAGGAAACGAGTGGACCTTGA |
Protein Sequence
|
MPPRRNGIYSKDYFVTYPKCSLTKEEALSQLLNLQTPTSKKYIRICRELHEDGTPRVRVLIQFEGKFKCQNMRFFDLVSPSWSAHFRPNIQGAKSSSDVKSYIEKDGDILDWGQFQIDGRSARGGQQTANDAYAAALNAGSKSEAIRVIKELAPKDFVLQFHNLNANLNRIFQEPPAPYVSPFSSSSFDQVPEELEEWASENVVDAAARPLRPQSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNASYKEFLDEDKNSALKSWALKNATFVFLTQPLYSGTNQSSTQGSEEAQQEETSGP |
NCBI Accession
|
YP_001955944.1
|
Location
|
2092-2430 |
Gene Name
|
AC4 |
Protein Name
|
AC4 |
Coding Region
|
ATGGGACTCCTCGCGTGCGAGTTCTCATCCAGTTCGAAGGGAAATTCAAGTGCCAGAATATGCGATTCTTCGACTTGGTCTCCCCAAGCTGGTCAGCACATTTCCGACCAAACATACAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGAGAAGGACGGGGACATTCTCGACTGGGGACAATTTCAGATCGACGGAAGGTCAGCAAGAGGAGGGCAACAGACAGCCAATGACGCTTACGCCGCAGCACTTAACGCGGGAAGTAAGTCGGAGGCTATTAGAGTCATTAAGGAACTGGCTCCTAAAGATTTTGTACTGCAATTTCATAATTTAA |
Protein Sequence
|
MGLLACEFSSSSKGNSSARICDSSTWSPQAGQHISDQTYRELNPAPTSSPTSRRTGTFSTGDNFRSTEGQQEEGNRQPMTLTPQHLTREVSRRLLESLRNWLLKILYCNFII |