Malvastrum yellow vein virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_000842105.1
Isolate China:Yunnan
Release date 2015/2/12
Submitter Zhou,X., Xie,Y., Peng,Y., Zhang,Z.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_004634
ACCGGATGGCCGCGCGATTTTTTGGTGGGCCCTAAACCAATGGTATGACGCGCTGAAAGCTTAAATAACTCTCCCCCCTTATAAATACTTCGGGCCTAAGTATCCGATTTGAAAATGTGGGATCCACTTGTAAACGAGTTCCCCGAGACGGTTCACGGGTTTCGGTGCATGATTTCTATCAAATATCTGCAGTTACTCTCTGAAGGATACTCCCCAGATACTGTTGGTTACGATCTAATACGTGAATTAATTTCTATTTTGCGTTCCAGGAATTATGTCGAAGCGTCCTGCAGATATCGTCATTTCTACCCCCGCGTCGAAGGTGCGTCGTCGTCTGAACTTCGACAGCCCTTACTCAACCCGTGTAACTGTCCCCACTGTCCGCGCCACAAAATCTCGAATGTGGGCGAACAGGCCCATGAACCGCAAACCCAGAATGTACAGGATGTACAGAAGTCCTGATGTTCCACGAGGCTGTGAAGGTCCATGTAAGGTCCAGTCCTTTGAGTCTAGACACGATGTAGTCCATATAGGGAAGGTTATGTGTATTAGTGATGTTACTCGCGGTACTGGGTTGACCCATAGAGTTGGTAAGCGTTTCTGTGTAAAGTCAGTTTATGTGTTGGGTAAGATTTGGATGGATGAAAATATCAAGAGCAAGAATCACACGAACAATGTGATGTTCTTTCTTGTCCGAGATCGACGTCCTACCGGCACGCCTCAGGATTTTGGAGATGTCTTTAACATGTTTGATAACGAGCCTAGCACCGCTACTGTGAAGAATATGCATCGAGATCGTTACCAGGTCGTAAGGAAGTGGTATGCAACTGTTACTGGTGGACAGTATGGAGCAAAGGAACAGGCTTTGGTTAAGAAGTTTGTTAGGGTTAATAATTATGTTGTTTACAACCAGCAAGAGGCTGGGAAGTACGAGAATCATTCCGAGAATGCCTTGATGTTGTATATGGCATGTACCCATGCCTCTAATCCTGTGTACGCTACCCTTAAGATTAGGATTTACTTCTACGATTCTGTAACCAACTGATATTAATAAAGATTGAATTTTATTTCTGAAGTCATGTCTACATACATAGTTTGCTCTATCCTTTTCCATAACACATGATTTATAGCTCTAATAATTGCGTTAATCGAGATTACACCGAGATTTGTGAGATACTTGAGGACTTGGGTTTTGAATACCCTTAAGAAAAGACCAGTCCGAGGGTGTAAGATCGTCCAGATTCGGTAGGTCAGAAAACACTTGTGCACTCCCAGAGCTCTCCGAAGGTTGTAGTTGAATTGGATCCTGATTGTTATGATGTCCATGTTCATCGTGAATGGCCGGTTGTCGTGGCTGAGGATCTTGAAATAGAGGGGATTTGGAAGCTCCCAGATATAGGCGCCACTCCATGCTTGAGCTGCAGTGATGGGTTCCCCTGTGCGTAAATCCATGGTTGCAGCAGTTTATTGATAGAAAATAAGAACACCCGCATTCAAGATCGACTCTCCTCCTCCTGTTGCGTTTCTTCGCTTCCCTGTGCTGTACTTTGATTGGAACCTGAGTACAGTGGTCCTTGGAGGGTGACGAAGATCGCATTCTTGAGAGCCCAATTCTTTAGTGCTGTGTCTTTCTCGTCGAGGAATTCTTTATAGCTGCTATTGGGACCAGGATTGCATAGGAAGATTGTCGGTATCCCGCCTTTAATTTGAACTGGCTTCCCGTATTTTGTGTTGGATTGCCAGTCCCTTTGGGCCCCCATGAACTCCTTAAAGTGCTTAAGAAAGTGCGGGTCGACGTCATCAATGACGTTGTACCATGCGTCGTTGCTGTAGACCTTTGGACTCAGATCTAGATGCCCACACAGATAGTTATGTGGGCCTAGTGACCTGGCCCACATTGTCTTCCCGGTTCGACTATCTCCCTCGATGACTATACTTTGAGGTCTAAGGGGCCGCGCAGCGGCATCGACGACATTCTCGCACGCCCACGCTTCAAGTTCTTCTGGAACTTGATCGAAAGAAGAAGATAAAAAAGGAGAAATATATTCCTCTAGTGGAGGAGTAAAAATCCTATCTAAATTACTATTTAAATTATGAAACTGTAAAACAAAATCTTTAGGAGCCTTCTCCTTTAATATATTGAGGGCCGCTGCTTTGGACCCTGAATTGATTGCCTCGGCATATGCGTCGTTGGCAGATTGGCAACCTCCTCTAGCTGATCGTCCATCGACTTGGAAAATTCCATGATCAAGGATGTCTCCGTCTTTCTTAATGTAGGTTTTGACATCGCTTGAGCTTTTAGCTCCCTGAATGTTTGGATGGAAATGTGCTGACCTGCTTGGGGATGTGAGGTCAAAGAATCTGTTGTTTTGGCATTTGAATTTTCCTTCGAACTGGATGAGAACATGCAAGTGAGGAGTCCCATTTTCATGAAGCTCTCTGCAGATTCTAATGAATTTTATGGAAGTGGGGGTTTGGAGATTTAAGAATTGGGAAAGTGCCTCTTCTTTAGTAAGGGAGCATTTGGGATAAGTGAGGAAATAATTTTTGGCATTTATAAGAAATTTCTTTGGTTGAGGCATGTTGACTTGGTCAATCGGGTCCTCTCAAACTTGGCTATGCAATCGGGGAATGGGTCCTTATTTATAGTTCAGGACCTAAATGGCATAATTGTAAATATGTGTTAGATGATCAAATTTCAAAATCCAAAAGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession NP_808730.1
Location 115-462
Gene Name AV2
Protein Name precoat protein
Coding Region ATGTGGGATCCACTTGTAAACGAGTTCCCCGAGACGGTTCACGGGTTTCGGTGCATGATTTCTATCAAATATCTGCAGTTACTCTCTGAAGGATACTCCCCAGATACTGTTGGTTACGATCTAATACGTGAATTAATTTCTATTTTGCGTTCCAGGAATTATGTCGAAGCGTCCTGCAGATATCGTCATTTCTACCCCCGCGTCGAAGGTGCGTCGTCGTCTGAACTTCGACAGCCCTTACTCAACCCGTGTAACTGTCCCCACTGTCCGCGCCACAAAATCTCGAATGTGGGCGAACAGGCCCATGAACCGCAAACCCAGAATGTACAGGATGTACAGAAGTCCTGA
Protein Sequence MWDPLVNEFPETVHGFRCMISIKYLQLLSEGYSPDTVGYDLIRELISILRSRNYVEASCRYRHFYPRVEGASSSELRQPLLNPCNCPHCPRHKISNVGEQAHEPQTQNVQDVQKS

NCBI Accession NP_808731.1
Location 275-1045
Gene Name AV1
Protein Name coat protein
Coding Region ATGTCGAAGCGTCCTGCAGATATCGTCATTTCTACCCCCGCGTCGAAGGTGCGTCGTCGTCTGAACTTCGACAGCCCTTACTCAACCCGTGTAACTGTCCCCACTGTCCGCGCCACAAAATCTCGAATGTGGGCGAACAGGCCCATGAACCGCAAACCCAGAATGTACAGGATGTACAGAAGTCCTGATGTTCCACGAGGCTGTGAAGGTCCATGTAAGGTCCAGTCCTTTGAGTCTAGACACGATGTAGTCCATATAGGGAAGGTTATGTGTATTAGTGATGTTACTCGCGGTACTGGGTTGACCCATAGAGTTGGTAAGCGTTTCTGTGTAAAGTCAGTTTATGTGTTGGGTAAGATTTGGATGGATGAAAATATCAAGAGCAAGAATCACACGAACAATGTGATGTTCTTTCTTGTCCGAGATCGACGTCCTACCGGCACGCCTCAGGATTTTGGAGATGTCTTTAACATGTTTGATAACGAGCCTAGCACCGCTACTGTGAAGAATATGCATCGAGATCGTTACCAGGTCGTAAGGAAGTGGTATGCAACTGTTACTGGTGGACAGTATGGAGCAAAGGAACAGGCTTTGGTTAAGAAGTTTGTTAGGGTTAATAATTATGTTGTTTACAACCAGCAAGAGGCTGGGAAGTACGAGAATCATTCCGAGAATGCCTTGATGTTGTATATGGCATGTACCCATGCCTCTAATCCTGTGTACGCTACCCTTAAGATTAGGATTTACTTCTACGATTCTGTAACCAACTGA
Protein Sequence MSKRPADIVISTPASKVRRRLNFDSPYSTRVTVPTVRATKSRMWANRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGTGLTHRVGKRFCVKSVYVLGKIWMDENIKSKNHTNNVMFFLVRDRRPTGTPQDFGDVFNMFDNEPSTATVKNMHRDRYQVVRKWYATVTGGQYGAKEQALVKKFVRVNNYVVYNQQEAGKYENHSENALMLYMACTHASNPVYATLKIRIYFYDSVTN

NCBI Accession NP_808732.1
Location 1048-1452
Gene Name AC3
Protein Name replication enhancer protein
Coding Region ATGGATTTACGCACAGGGGAACCCATCACTGCAGCTCAAGCATGGAGTGGCGCCTATATCTGGGAGCTTCCAAATCCCCTCTATTTCAAGATCCTCAGCCACGACAACCGGCCATTCACGATGAACATGGACATCATAACAATCAGGATCCAATTCAACTACAACCTTCGGAGAGCTCTGGGAGTGCACAAGTGTTTTCTGACCTACCGAATCTGGACGATCTTACACCCTCGGACTGGTCTTTTCTTAAGGGTATTCAAAACCCAAGTCCTCAAGTATCTCACAAATCTCGGTGTAATCTCGATTAACGCAATTATTAGAGCTATAAATCATGTGTTATGGAAAAGGATAGAGCAAACTATGTATGTAGACATGACTTCAGAAATAAAATTCAATCTTTATTAA
Protein Sequence MDLRTGEPITAAQAWSGAYIWELPNPLYFKILSHDNRPFTMNMDIITIRIQFNYNLRRALGVHKCFLTYRIWTILHPRTGLFLRVFKTQVLKYLTNLGVISINAIIRAINHVLWKRIEQTMYVDMTSEIKFNLY

NCBI Accession NP_808733.1
Location 1145-1597
Gene Name AC2
Protein Name transcriptional activator protein
Coding Region ATGCGATCTTCGTCACCCTCCAAGGACCACTGTACTCAGGTTCCAATCAAAGTACAGCACAGGGAAGCGAAGAAACGCAACAGGAGGAGGAGAGTCGATCTTGAATGCGGGTGTTCTTATTTTCTATCAATAAACTGCTGCAACCATGGATTTACGCACAGGGGAACCCATCACTGCAGCTCAAGCATGGAGTGGCGCCTATATCTGGGAGCTTCCAAATCCCCTCTATTTCAAGATCCTCAGCCACGACAACCGGCCATTCACGATGAACATGGACATCATAACAATCAGGATCCAATTCAACTACAACCTTCGGAGAGCTCTGGGAGTGCACAAGTGTTTTCTGACCTACCGAATCTGGACGATCTTACACCCTCGGACTGGTCTTTTCTTAAGGGTATTCAAAACCCAAGTCCTCAAGTATCTCACAAATCTCGGTGTAATCTCGATTAA
Protein Sequence MRSSSPSKDHCTQVPIKVQHREAKKRNRRRRVDLECGCSYFLSINCCNHGFTHRGTHHCSSSMEWRLYLGASKSPLFQDPQPRQPAIHDEHGHHNNQDPIQLQPSESSGSAQVFSDLPNLDDLTPSDWSFLKGIQNPSPQVSHKSRCNLD

NCBI Accession NP_808734.1
Location 1494-2582
Gene Name AC1
Protein Name Rep protein
Coding Region ATGCCTCAACCAAAGAAATTTCTTATAAATGCCAAAAATTATTTCCTCACTTATCCCAAATGCTCCCTTACTAAAGAAGAGGCACTTTCCCAATTCTTAAATCTCCAAACCCCCACTTCCATAAAATTCATTAGAATCTGCAGAGAGCTTCATGAAAATGGGACTCCTCACTTGCATGTTCTCATCCAGTTCGAAGGAAAATTCAAATGCCAAAACAACAGATTCTTTGACCTCACATCCCCAAGCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAAAGCTCAAGCGATGTCAAAACCTACATTAAGAAAGACGGAGACATCCTTGATCATGGAATTTTCCAAGTCGATGGACGATCAGCTAGAGGAGGTTGCCAATCTGCCAACGACGCATATGCCGAGGCAATCAATTCAGGGTCCAAAGCAGCGGCCCTCAATATATTAAAGGAGAAGGCTCCTAAAGATTTTGTTTTACAGTTTCATAATTTAAATAGTAATTTAGATAGGATTTTTACTCCTCCACTAGAGGAATATATTTCTCCTTTTTTATCTTCTTCTTTCGATCAAGTTCCAGAAGAACTTGAAGCGTGGGCGTGCGAGAATGTCGTCGATGCCGCTGCGCGGCCCCTTAGACCTCAAAGTATAGTCATCGAGGGAGATAGTCGAACCGGGAAGACAATGTGGGCCAGGTCACTAGGCCCACATAACTATCTGTGTGGGCATCTAGATCTGAGTCCAAAGGTCTACAGCAACGACGCATGGTACAACGTCATTGATGACGTCGACCCGCACTTTCTTAAGCACTTTAAGGAGTTCATGGGGGCCCAAAGGGACTGGCAATCCAACACAAAATACGGGAAGCCAGTTCAAATTAAAGGCGGGATACCGACAATCTTCCTATGCAATCCTGGTCCCAATAGCAGCTATAAAGAATTCCTCGACGAGAAAGACACAGCACTAAAGAATTGGGCTCTCAAGAATGCGATCTTCGTCACCCTCCAAGGACCACTGTACTCAGGTTCCAATCAAAGTACAGCACAGGGAAGCGAAGAAACGCAACAGGAGGAGGAGAGTCGATCTTGA
Protein Sequence MPQPKKFLINAKNYFLTYPKCSLTKEEALSQFLNLQTPTSIKFIRICRELHENGTPHLHVLIQFEGKFKCQNNRFFDLTSPSRSAHFHPNIQGAKSSSDVKTYIKKDGDILDHGIFQVDGRSARGGCQSANDAYAEAINSGSKAAALNILKEKAPKDFVLQFHNLNSNLDRIFTPPLEEYISPFLSSSFDQVPEELEAWACENVVDAAARPLRPQSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEKDTALKNWALKNAIFVTLQGPLYSGSNQSTAQGSEETQQEEESRS

NCBI Accession NP_808735.1
Location 2132-2431
Gene Name AC4
Protein Name transcriptional regulator protein
Coding Region ATGAAAATGGGACTCCTCACTTGCATGTTCTCATCCAGTTCGAAGGAAAATTCAAATGCCAAAACAACAGATTCTTTGACCTCACATCCCCAAGCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAAAGCTCAAGCGATGTCAAAACCTACATTAAGAAAGACGGAGACATCCTTGATCATGGAATTTTCCAAGTCGATGGACGATCAGCTAGAGGAGGTTGCCAATCTGCCAACGACGCATATGCCGAGGCAATCAATTCAGGGTCCAAAGCAGCGGCCCTCAATATATTAA
Protein Sequence MKMGLLTCMFSSSSKENSNAKTTDSLTSHPQAGQHISIQTFRELKAQAMSKPTLRKTETSLIMEFSKSMDDQLEEVANLPTTHMPRQSIQGPKQRPSIY