Malvastrum yellow vein Honghe virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_001706885.1
Isolate China:Yunnan Province
Release date 2016/8/18
Submitter Liu,P., Zhou,X.P.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_030749
ACCGGATGGCCGCGCGATTTTTTTTGGGTGGGCCCTTGGCCAATCAGATGATGCGCTGAAAGCTTAAATAAATCTCCCGCCCTTATAAATACTTCGGGCCTAAGTATCCGCTTTGAAAATGTGGGATCCACTTGTAAACGAGTTCCCCGAGACGGTTCATGGTTTTCGGTGCATGCTTTCTATCAAATATCTTCAGTTGCTCTCTGAAGGTTATTCTCCAGATACGGTAGGTTACGATCTAATACGTGAATTAATTGCAATTTTGCGTTCCAGGAATTATGTCGAAGCGTCCTGCAGATATCGTAATTTCTACCCCCGCGTCGAAGGTTCGTCGTCGTCTGAACTTCGACAGTCCTTACTCAACCCGTGTAGTAACTGTCCCTACTGTCCGCGCCACAAAATCTCGAATGTGGGCGAACCGGCCCATGAATCGAAAGCCCAGAATGTACAGGATGTACAAAAGCCCTGATGTTCCTCGTGGTTGTGAGGGTCCATGTAAGGTCCAATCTTTTGATGCGAAGAACGATATTGGTCACATGGGTAAGGTGGTATGTTTGTCCGATGTAACTAGGGGAATGGGTTTGACTCATCGTGTTGGTAAACGTTTCTGCGTTAAGTCGTTGTATTTTGTTGGCAAGATCTGGATGGATGAAAATATCAAGGTTAAGAATCACACTAACACCGTTTTGTTTTGGATTGTTCGAGATAGGCGTCCTACTGGCACTCCTAATGACTTTCAGCAGGTTTTTAATGTGTATGATAATGAACCGTCTACTGCGACTGTTAAGAATGACCAACGTGATCGCTATCAAGTCTTGCGGAGGTTTCAGGCAACGGTGACTGGTGGACAATATGCAGCTAAGGAACAGGCTATCATTAGGAGATTTTATCGTGTTAATAATTATGTAGTTTATAATCATCAGGAAGCTGGGAAGTACGAGAATCACACTGAGAATGCTTTGTTGTTGTATATGGCATGTACTCATGCCTCTAATCCTGTGTATGCTACTTTGAAAGTGAGGAGTTATTTTTATGACTCTGTCACGAATTAATAAAGATTAAATTTTATTTCTGAATTCATGTCTACATACATAGTTTGTTCTATTTTTTTCCATAATACATGATCTATAGCCCTAATAATTGAATTAATGGAGATTACACCCAGATTGTTTAGATATTTGAGGACTTGGGTTTTGAATACCCTTAAGAAAAGACCAGTCCGAGGGTGTAAGGTCGTCCATATTCGGTAGGTCAGAAAACACTTGTGCACTTCCAGAGCTCTCCGAAGGTTGTAGTTGAATTGGATCCTGATTGTTATTATGTCCATGTTCATCGTGAATGGACGGTTGTCGTGGTTGAGGATCTTGAAATAGAGGGGATTTGGAACCTCCCAGATATAGGCGCCATTCCATGCTTGAGCTGCAGTGATGGGTTCCCCTGTGCGTAAATCCATGGTTGAAGCAGTTGATTGACAGGTAATAAGAGCACCCGCATTCAAGATCTACTCTCCTCCTCCTGTTGCGTCTCTTCGCTTCCCTGTGCTGTACTTTGATTGGAACCTGAGTACAGTGGTCTTTCGAGGGTGATGAAGATCGCATTCTTGAGAGTCCAGTTCTTTAGTGCGGTGTTCTTCTCCTCGTCGAGGAATTCTTTATAACTGCTGTTGGGGCCAGGATTGCACAGGAAGATTGTCGGTATTCCGCCTTTAATTTGAACTGGCTTTCCGTATTTCGTATTTGATTGCCAGTCCCGTTGGGCCCCCATGAATTCTTTAAAGTGTTTGAGGAAGTGGGGATCTACGTCATCAATGACGTTGTACCAAGCATCGTTGCTGTAGACCTTTGGGCTTAGATCCAAATGGCCACATAGATAGTTGTGTGGGCCTAGAGACCTAGCCCACATCGTCTTCCCGGTACGACTGTCTCCCTCAATCACTATACTCATTGGTCTTAGGGGCCGCGCAGCGGCGTCGACGACGTTCTCGGACGCCCACTCTTCAAGTTCTTCTGGAACTTGATCGAACGAAGAAGAAGAAAAAGGAGAAACATAAACCTCCAGCGGAGGTGTAAAAATCCTATCTAAATTAGCATTTAAATTATGAAATTGTAATACATAATCCTTAGGGGCTAATTCCCTAAGTACGCTAAGAGCCTCTGACTTATTGCCTGTGTTAAGTGCTGCTGCGTAAGCGTCGTTGGCTGATTGTTGACCTCCTCTTGCAGATCGCCCATCGATCTGAAATTCTCCCCATTCGAGAATGTCTCCGTCCTTGTGGATGTAGGACTTGACGTCGGAGCTGGATTTAGCTCCCTGAATGTTTGGATGGAAATGTGCTGACCTGGTTGGGGATACCAGGTCGAAGAATCGGTTATTTTTGCATTGGAATTTGCCCTCGAACTGGATGAGCACGTGCAAATGAGGTTCCCCATTTTCATGAAACTCTCTGCATATTTTGATGTATTTTTTGGAAGTTGGGGTTTGAAGGTTTTGTAATTGGGAAAGTGCTTCGTCTTTTGTGAGAGAGCATTTAGGATAAGTAAGGAAATAGTTTTTGGCATTTATTTTAAATTGTTTTGTAGGATGCATGGTCAATGGACACCGATTGACTCTCCAAAACAACTTGTCTATGCAATCGGTGTATTGGGGTCTTATTTATACCTGGACACCAAATGGCAAAGTCGTAATTCACATAAGAAATTCATACCCTTACGGTCCAAAAAGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession YP_009270643.1
Location 119-469
Gene Name AV2
Protein Name AV2 protein
Coding Region ATGTGGGATCCACTTGTAAACGAGTTCCCCGAGACGGTTCATGGTTTTCGGTGCATGCTTTCTATCAAATATCTTCAGTTGCTCTCTGAAGGTTATTCTCCAGATACGGTAGGTTACGATCTAATACGTGAATTAATTGCAATTTTGCGTTCCAGGAATTATGTCGAAGCGTCCTGCAGATATCGTAATTTCTACCCCCGCGTCGAAGGTTCGTCGTCGTCTGAACTTCGACAGTCCTTACTCAACCCGTGTAGTAACTGTCCCTACTGTCCGCGCCACAAAATCTCGAATGTGGGCGAACCGGCCCATGAATCGAAAGCCCAGAATGTACAGGATGTACAAAAGCCCTGA
Protein Sequence MWDPLVNEFPETVHGFRCMLSIKYLQLLSEGYSPDTVGYDLIRELIAILRSRNYVEASCRYRNFYPRVEGSSSSELRQSLLNPCSNCPYCPRHKISNVGEPAHESKAQNVQDVQKP

NCBI Accession YP_009270644.1
Location 279-1052
Gene Name AV1
Protein Name AV1 protein
Coding Region ATGTCGAAGCGTCCTGCAGATATCGTAATTTCTACCCCCGCGTCGAAGGTTCGTCGTCGTCTGAACTTCGACAGTCCTTACTCAACCCGTGTAGTAACTGTCCCTACTGTCCGCGCCACAAAATCTCGAATGTGGGCGAACCGGCCCATGAATCGAAAGCCCAGAATGTACAGGATGTACAAAAGCCCTGATGTTCCTCGTGGTTGTGAGGGTCCATGTAAGGTCCAATCTTTTGATGCGAAGAACGATATTGGTCACATGGGTAAGGTGGTATGTTTGTCCGATGTAACTAGGGGAATGGGTTTGACTCATCGTGTTGGTAAACGTTTCTGCGTTAAGTCGTTGTATTTTGTTGGCAAGATCTGGATGGATGAAAATATCAAGGTTAAGAATCACACTAACACCGTTTTGTTTTGGATTGTTCGAGATAGGCGTCCTACTGGCACTCCTAATGACTTTCAGCAGGTTTTTAATGTGTATGATAATGAACCGTCTACTGCGACTGTTAAGAATGACCAACGTGATCGCTATCAAGTCTTGCGGAGGTTTCAGGCAACGGTGACTGGTGGACAATATGCAGCTAAGGAACAGGCTATCATTAGGAGATTTTATCGTGTTAATAATTATGTAGTTTATAATCATCAGGAAGCTGGGAAGTACGAGAATCACACTGAGAATGCTTTGTTGTTGTATATGGCATGTACTCATGCCTCTAATCCTGTGTATGCTACTTTGAAAGTGAGGAGTTATTTTTATGACTCTGTCACGAATTAA
Protein Sequence MSKRPADIVISTPASKVRRRLNFDSPYSTRVVTVPTVRATKSRMWANRPMNRKPRMYRMYKSPDVPRGCEGPCKVQSFDAKNDIGHMGKVVCLSDVTRGMGLTHRVGKRFCVKSLYFVGKIWMDENIKVKNHTNTVLFWIVRDRRPTGTPNDFQQVFNVYDNEPSTATVKNDQRDRYQVLRRFQATVTGGQYAAKEQAIIRRFYRVNNYVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKVRSYFYDSVTN

NCBI Accession YP_009270645.1
Location 1049-1453
Gene Name AC3
Protein Name AC3 protein
Coding Region ATGGATTTACGCACAGGGGAACCCATCACTGCAGCTCAAGCATGGAATGGCGCCTATATCTGGGAGGTTCCAAATCCCCTCTATTTCAAGATCCTCAACCACGACAACCGTCCATTCACGATGAACATGGACATAATAACAATCAGGATCCAATTCAACTACAACCTTCGGAGAGCTCTGGAAGTGCACAAGTGTTTTCTGACCTACCGAATATGGACGACCTTACACCCTCGGACTGGTCTTTTCTTAAGGGTATTCAAAACCCAAGTCCTCAAATATCTAAACAATCTGGGTGTAATCTCCATTAATTCAATTATTAGGGCTATAGATCATGTATTATGGAAAAAAATAGAACAAACTATGTATGTAGACATGAATTCAGAAATAAAATTTAATCTTTATTAA
Protein Sequence MDLRTGEPITAAQAWNGAYIWEVPNPLYFKILNHDNRPFTMNMDIITIRIQFNYNLRRALEVHKCFLTYRIWTTLHPRTGLFLRVFKTQVLKYLNNLGVISINSIIRAIDHVLWKKIEQTMYVDMNSEIKFNLY

NCBI Accession YP_009270646.1
Location 1146-1598
Gene Name AC2
Protein Name AC2 protein
Coding Region ATGCGATCTTCATCACCCTCGAAAGACCACTGTACTCAGGTTCCAATCAAAGTACAGCACAGGGAAGCGAAGAGACGCAACAGGAGGAGGAGAGTAGATCTTGAATGCGGGTGCTCTTATTACCTGTCAATCAACTGCTTCAACCATGGATTTACGCACAGGGGAACCCATCACTGCAGCTCAAGCATGGAATGGCGCCTATATCTGGGAGGTTCCAAATCCCCTCTATTTCAAGATCCTCAACCACGACAACCGTCCATTCACGATGAACATGGACATAATAACAATCAGGATCCAATTCAACTACAACCTTCGGAGAGCTCTGGAAGTGCACAAGTGTTTTCTGACCTACCGAATATGGACGACCTTACACCCTCGGACTGGTCTTTTCTTAAGGGTATTCAAAACCCAAGTCCTCAAATATCTAAACAATCTGGGTGTAATCTCCATTAA
Protein Sequence MRSSSPSKDHCTQVPIKVQHREAKRRNRRRRVDLECGCSYYLSINCFNHGFTHRGTHHCSSSMEWRLYLGGSKSPLFQDPQPRQPSIHDEHGHNNNQDPIQLQPSESSGSAQVFSDLPNMDDLTPSDWSFLKGIQNPSPQISKQSGCNLH

NCBI Accession YP_009270647.1
Location 1495-2586
Gene Name AC1
Protein Name AC1 protein
Coding Region ATGCATCCTACAAAACAATTTAAAATAAATGCCAAAAACTATTTCCTTACTTATCCTAAATGCTCTCTCACAAAAGACGAAGCACTTTCCCAATTACAAAACCTTCAAACCCCAACTTCCAAAAAATACATCAAAATATGCAGAGAGTTTCATGAAAATGGGGAACCTCATTTGCACGTGCTCATCCAGTTCGAGGGCAAATTCCAATGCAAAAATAACCGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCCACAAGGACGGAGACATTCTCGAATGGGGAGAATTTCAGATCGATGGGCGATCTGCAAGAGGAGGTCAACAATCAGCCAACGACGCTTACGCAGCAGCACTTAACACAGGCAATAAGTCAGAGGCTCTTAGCGTACTTAGGGAATTAGCCCCTAAGGATTATGTATTACAATTTCATAATTTAAATGCTAATTTAGATAGGATTTTTACACCTCCGCTGGAGGTTTATGTTTCTCCTTTTTCTTCTTCTTCGTTCGATCAAGTTCCAGAAGAACTTGAAGAGTGGGCGTCCGAGAACGTCGTCGACGCCGCTGCGCGGCCCCTAAGACCAATGAGTATAGTGATTGAGGGAGACAGTCGTACCGGGAAGACGATGTGGGCTAGGTCTCTAGGCCCACACAACTATCTATGTGGCCATTTGGATCTAAGCCCAAAGGTCTACAGCAACGATGCTTGGTACAACGTCATTGATGACGTAGATCCCCACTTCCTCAAACACTTTAAAGAATTCATGGGGGCCCAACGGGACTGGCAATCAAATACGAAATACGGAAAGCCAGTTCAAATTAAAGGCGGAATACCGACAATCTTCCTGTGCAATCCTGGCCCCAACAGCAGTTATAAAGAATTCCTCGACGAGGAGAAGAACACCGCACTAAAGAACTGGACTCTCAAGAATGCGATCTTCATCACCCTCGAAAGACCACTGTACTCAGGTTCCAATCAAAGTACAGCACAGGGAAGCGAAGAGACGCAACAGGAGGAGGAGAGTAGATCTTGA
Protein Sequence MHPTKQFKINAKNYFLTYPKCSLTKDEALSQLQNLQTPTSKKYIKICREFHENGEPHLHVLIQFEGKFQCKNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYIHKDGDILEWGEFQIDGRSARGGQQSANDAYAAALNTGNKSEALSVLRELAPKDYVLQFHNLNANLDRIFTPPLEVYVSPFSSSSFDQVPEELEEWASENVVDAAARPLRPMSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNTALKNWTLKNAIFITLERPLYSGSNQSTAQGSEETQQEEESRS

NCBI Accession YP_009270648.1
Location 2127-2429
Gene Name AC4
Protein Name AC4 protein
Coding Region ATGGGGAACCTCATTTGCACGTGCTCATCCAGTTCGAGGGCAAATTCCAATGCAAAAATAACCGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCCACAAGGACGGAGACATTCTCGAATGGGGAGAATTTCAGATCGATGGGCGATCTGCAAGAGGAGGTCAACAATCAGCCAACGACGCTTACGCAGCAGCACTTAACACAGGCAATAAGTCAGAGGCTCTTAGCGTACTTAGGGAATTAG
Protein Sequence MGNLICTCSSSSRANSNAKITDSSTWYPQPGQHISIQTFRELNPAPTSSPTSTRTETFSNGENFRSMGDLQEEVNNQPTTLTQQHLTQAISQRLLAYLGN