Malvastrum yellow vein Honghe virus
Basic Information
Genus |
Begomovirus
|
NCBI Assembly |
GCF_001706885.1 |
Isolate |
China:Yunnan Province |
Release date |
2016/8/18 |
Submitter |
Liu,P., Zhou,X.P. |
Host |
|
Vector |
|
Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCGCGATTTTTTTTGGGTGGGCCCTTGGCCAATCAGATGATGCGCTGAAAGCTTAAATAAATCTCCCGCCCTTATAAATACTTCGGGCCTAAGTATCCGCTTTGAAAATGTGGGATCCACTTGTAAACGAGTTCCCCGAGACGGTTCATGGTTTTCGGTGCATGCTTTCTATCAAATATCTTCAGTTGCTCTCTGAAGGTTATTCTCCAGATACGGTAGGTTACGATCTAATACGTGAATTAATTGCAATTTTGCGTTCCAGGAATTATGTCGAAGCGTCCTGCAGATATCGTAATTTCTACCCCCGCGTCGAAGGTTCGTCGTCGTCTGAACTTCGACAGTCCTTACTCAACCCGTGTAGTAACTGTCCCTACTGTCCGCGCCACAAAATCTCGAATGTGGGCGAACCGGCCCATGAATCGAAAGCCCAGAATGTACAGGATGTACAAAAGCCCTGATGTTCCTCGTGGTTGTGAGGGTCCATGTAAGGTCCAATCTTTTGATGCGAAGAACGATATTGGTCACATGGGTAAGGTGGTATGTTTGTCCGATGTAACTAGGGGAATGGGTTTGACTCATCGTGTTGGTAAACGTTTCTGCGTTAAGTCGTTGTATTTTGTTGGCAAGATCTGGATGGATGAAAATATCAAGGTTAAGAATCACACTAACACCGTTTTGTTTTGGATTGTTCGAGATAGGCGTCCTACTGGCACTCCTAATGACTTTCAGCAGGTTTTTAATGTGTATGATAATGAACCGTCTACTGCGACTGTTAAGAATGACCAACGTGATCGCTATCAAGTCTTGCGGAGGTTTCAGGCAACGGTGACTGGTGGACAATATGCAGCTAAGGAACAGGCTATCATTAGGAGATTTTATCGTGTTAATAATTATGTAGTTTATAATCATCAGGAAGCTGGGAAGTACGAGAATCACACTGAGAATGCTTTGTTGTTGTATATGGCATGTACTCATGCCTCTAATCCTGTGTATGCTACTTTGAAAGTGAGGAGTTATTTTTATGACTCTGTCACGAATTAATAAAGATTAAATTTTATTTCTGAATTCATGTCTACATACATAGTTTGTTCTATTTTTTTCCATAATACATGATCTATAGCCCTAATAATTGAATTAATGGAGATTACACCCAGATTGTTTAGATATTTGAGGACTTGGGTTTTGAATACCCTTAAGAAAAGACCAGTCCGAGGGTGTAAGGTCGTCCATATTCGGTAGGTCAGAAAACACTTGTGCACTTCCAGAGCTCTCCGAAGGTTGTAGTTGAATTGGATCCTGATTGTTATTATGTCCATGTTCATCGTGAATGGACGGTTGTCGTGGTTGAGGATCTTGAAATAGAGGGGATTTGGAACCTCCCAGATATAGGCGCCATTCCATGCTTGAGCTGCAGTGATGGGTTCCCCTGTGCGTAAATCCATGGTTGAAGCAGTTGATTGACAGGTAATAAGAGCACCCGCATTCAAGATCTACTCTCCTCCTCCTGTTGCGTCTCTTCGCTTCCCTGTGCTGTACTTTGATTGGAACCTGAGTACAGTGGTCTTTCGAGGGTGATGAAGATCGCATTCTTGAGAGTCCAGTTCTTTAGTGCGGTGTTCTTCTCCTCGTCGAGGAATTCTTTATAACTGCTGTTGGGGCCAGGATTGCACAGGAAGATTGTCGGTATTCCGCCTTTAATTTGAACTGGCTTTCCGTATTTCGTATTTGATTGCCAGTCCCGTTGGGCCCCCATGAATTCTTTAAAGTGTTTGAGGAAGTGGGGATCTACGTCATCAATGACGTTGTACCAAGCATCGTTGCTGTAGACCTTTGGGCTTAGATCCAAATGGCCACATAGATAGTTGTGTGGGCCTAGAGACCTAGCCCACATCGTCTTCCCGGTACGACTGTCTCCCTCAATCACTATACTCATTGGTCTTAGGGGCCGCGCAGCGGCGTCGACGACGTTCTCGGACGCCCACTCTTCAAGTTCTTCTGGAACTTGATCGAACGAAGAAGAAGAAAAAGGAGAAACATAAACCTCCAGCGGAGGTGTAAAAATCCTATCTAAATTAGCATTTAAATTATGAAATTGTAATACATAATCCTTAGGGGCTAATTCCCTAAGTACGCTAAGAGCCTCTGACTTATTGCCTGTGTTAAGTGCTGCTGCGTAAGCGTCGTTGGCTGATTGTTGACCTCCTCTTGCAGATCGCCCATCGATCTGAAATTCTCCCCATTCGAGAATGTCTCCGTCCTTGTGGATGTAGGACTTGACGTCGGAGCTGGATTTAGCTCCCTGAATGTTTGGATGGAAATGTGCTGACCTGGTTGGGGATACCAGGTCGAAGAATCGGTTATTTTTGCATTGGAATTTGCCCTCGAACTGGATGAGCACGTGCAAATGAGGTTCCCCATTTTCATGAAACTCTCTGCATATTTTGATGTATTTTTTGGAAGTTGGGGTTTGAAGGTTTTGTAATTGGGAAAGTGCTTCGTCTTTTGTGAGAGAGCATTTAGGATAAGTAAGGAAATAGTTTTTGGCATTTATTTTAAATTGTTTTGTAGGATGCATGGTCAATGGACACCGATTGACTCTCCAAAACAACTTGTCTATGCAATCGGTGTATTGGGGTCTTATTTATACCTGGACACCAAATGGCAAAGTCGTAATTCACATAAGAAATTCATACCCTTACGGTCCAAAAAGCGGCCATCCGTATAATATT
Gene Information
NCBI Accession
|
YP_009270643.1
|
Location
|
119-469 |
Gene Name
|
AV2 |
Protein Name
|
AV2 protein |
Coding Region
|
ATGTGGGATCCACTTGTAAACGAGTTCCCCGAGACGGTTCATGGTTTTCGGTGCATGCTTTCTATCAAATATCTTCAGTTGCTCTCTGAAGGTTATTCTCCAGATACGGTAGGTTACGATCTAATACGTGAATTAATTGCAATTTTGCGTTCCAGGAATTATGTCGAAGCGTCCTGCAGATATCGTAATTTCTACCCCCGCGTCGAAGGTTCGTCGTCGTCTGAACTTCGACAGTCCTTACTCAACCCGTGTAGTAACTGTCCCTACTGTCCGCGCCACAAAATCTCGAATGTGGGCGAACCGGCCCATGAATCGAAAGCCCAGAATGTACAGGATGTACAAAAGCCCTGA |
Protein Sequence
|
MWDPLVNEFPETVHGFRCMLSIKYLQLLSEGYSPDTVGYDLIRELIAILRSRNYVEASCRYRNFYPRVEGSSSSELRQSLLNPCSNCPYCPRHKISNVGEPAHESKAQNVQDVQKP |
NCBI Accession
|
YP_009270644.1
|
Location
|
279-1052 |
Gene Name
|
AV1 |
Protein Name
|
AV1 protein |
Coding Region
|
ATGTCGAAGCGTCCTGCAGATATCGTAATTTCTACCCCCGCGTCGAAGGTTCGTCGTCGTCTGAACTTCGACAGTCCTTACTCAACCCGTGTAGTAACTGTCCCTACTGTCCGCGCCACAAAATCTCGAATGTGGGCGAACCGGCCCATGAATCGAAAGCCCAGAATGTACAGGATGTACAAAAGCCCTGATGTTCCTCGTGGTTGTGAGGGTCCATGTAAGGTCCAATCTTTTGATGCGAAGAACGATATTGGTCACATGGGTAAGGTGGTATGTTTGTCCGATGTAACTAGGGGAATGGGTTTGACTCATCGTGTTGGTAAACGTTTCTGCGTTAAGTCGTTGTATTTTGTTGGCAAGATCTGGATGGATGAAAATATCAAGGTTAAGAATCACACTAACACCGTTTTGTTTTGGATTGTTCGAGATAGGCGTCCTACTGGCACTCCTAATGACTTTCAGCAGGTTTTTAATGTGTATGATAATGAACCGTCTACTGCGACTGTTAAGAATGACCAACGTGATCGCTATCAAGTCTTGCGGAGGTTTCAGGCAACGGTGACTGGTGGACAATATGCAGCTAAGGAACAGGCTATCATTAGGAGATTTTATCGTGTTAATAATTATGTAGTTTATAATCATCAGGAAGCTGGGAAGTACGAGAATCACACTGAGAATGCTTTGTTGTTGTATATGGCATGTACTCATGCCTCTAATCCTGTGTATGCTACTTTGAAAGTGAGGAGTTATTTTTATGACTCTGTCACGAATTAA |
Protein Sequence
|
MSKRPADIVISTPASKVRRRLNFDSPYSTRVVTVPTVRATKSRMWANRPMNRKPRMYRMYKSPDVPRGCEGPCKVQSFDAKNDIGHMGKVVCLSDVTRGMGLTHRVGKRFCVKSLYFVGKIWMDENIKVKNHTNTVLFWIVRDRRPTGTPNDFQQVFNVYDNEPSTATVKNDQRDRYQVLRRFQATVTGGQYAAKEQAIIRRFYRVNNYVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKVRSYFYDSVTN |
NCBI Accession
|
YP_009270645.1
|
Location
|
1049-1453 |
Gene Name
|
AC3 |
Protein Name
|
AC3 protein |
Coding Region
|
ATGGATTTACGCACAGGGGAACCCATCACTGCAGCTCAAGCATGGAATGGCGCCTATATCTGGGAGGTTCCAAATCCCCTCTATTTCAAGATCCTCAACCACGACAACCGTCCATTCACGATGAACATGGACATAATAACAATCAGGATCCAATTCAACTACAACCTTCGGAGAGCTCTGGAAGTGCACAAGTGTTTTCTGACCTACCGAATATGGACGACCTTACACCCTCGGACTGGTCTTTTCTTAAGGGTATTCAAAACCCAAGTCCTCAAATATCTAAACAATCTGGGTGTAATCTCCATTAATTCAATTATTAGGGCTATAGATCATGTATTATGGAAAAAAATAGAACAAACTATGTATGTAGACATGAATTCAGAAATAAAATTTAATCTTTATTAA |
Protein Sequence
|
MDLRTGEPITAAQAWNGAYIWEVPNPLYFKILNHDNRPFTMNMDIITIRIQFNYNLRRALEVHKCFLTYRIWTTLHPRTGLFLRVFKTQVLKYLNNLGVISINSIIRAIDHVLWKKIEQTMYVDMNSEIKFNLY |
NCBI Accession
|
YP_009270646.1
|
Location
|
1146-1598 |
Gene Name
|
AC2 |
Protein Name
|
AC2 protein |
Coding Region
|
ATGCGATCTTCATCACCCTCGAAAGACCACTGTACTCAGGTTCCAATCAAAGTACAGCACAGGGAAGCGAAGAGACGCAACAGGAGGAGGAGAGTAGATCTTGAATGCGGGTGCTCTTATTACCTGTCAATCAACTGCTTCAACCATGGATTTACGCACAGGGGAACCCATCACTGCAGCTCAAGCATGGAATGGCGCCTATATCTGGGAGGTTCCAAATCCCCTCTATTTCAAGATCCTCAACCACGACAACCGTCCATTCACGATGAACATGGACATAATAACAATCAGGATCCAATTCAACTACAACCTTCGGAGAGCTCTGGAAGTGCACAAGTGTTTTCTGACCTACCGAATATGGACGACCTTACACCCTCGGACTGGTCTTTTCTTAAGGGTATTCAAAACCCAAGTCCTCAAATATCTAAACAATCTGGGTGTAATCTCCATTAA |
Protein Sequence
|
MRSSSPSKDHCTQVPIKVQHREAKRRNRRRRVDLECGCSYYLSINCFNHGFTHRGTHHCSSSMEWRLYLGGSKSPLFQDPQPRQPSIHDEHGHNNNQDPIQLQPSESSGSAQVFSDLPNMDDLTPSDWSFLKGIQNPSPQISKQSGCNLH |
NCBI Accession
|
YP_009270647.1
|
Location
|
1495-2586 |
Gene Name
|
AC1 |
Protein Name
|
AC1 protein |
Coding Region
|
ATGCATCCTACAAAACAATTTAAAATAAATGCCAAAAACTATTTCCTTACTTATCCTAAATGCTCTCTCACAAAAGACGAAGCACTTTCCCAATTACAAAACCTTCAAACCCCAACTTCCAAAAAATACATCAAAATATGCAGAGAGTTTCATGAAAATGGGGAACCTCATTTGCACGTGCTCATCCAGTTCGAGGGCAAATTCCAATGCAAAAATAACCGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCCACAAGGACGGAGACATTCTCGAATGGGGAGAATTTCAGATCGATGGGCGATCTGCAAGAGGAGGTCAACAATCAGCCAACGACGCTTACGCAGCAGCACTTAACACAGGCAATAAGTCAGAGGCTCTTAGCGTACTTAGGGAATTAGCCCCTAAGGATTATGTATTACAATTTCATAATTTAAATGCTAATTTAGATAGGATTTTTACACCTCCGCTGGAGGTTTATGTTTCTCCTTTTTCTTCTTCTTCGTTCGATCAAGTTCCAGAAGAACTTGAAGAGTGGGCGTCCGAGAACGTCGTCGACGCCGCTGCGCGGCCCCTAAGACCAATGAGTATAGTGATTGAGGGAGACAGTCGTACCGGGAAGACGATGTGGGCTAGGTCTCTAGGCCCACACAACTATCTATGTGGCCATTTGGATCTAAGCCCAAAGGTCTACAGCAACGATGCTTGGTACAACGTCATTGATGACGTAGATCCCCACTTCCTCAAACACTTTAAAGAATTCATGGGGGCCCAACGGGACTGGCAATCAAATACGAAATACGGAAAGCCAGTTCAAATTAAAGGCGGAATACCGACAATCTTCCTGTGCAATCCTGGCCCCAACAGCAGTTATAAAGAATTCCTCGACGAGGAGAAGAACACCGCACTAAAGAACTGGACTCTCAAGAATGCGATCTTCATCACCCTCGAAAGACCACTGTACTCAGGTTCCAATCAAAGTACAGCACAGGGAAGCGAAGAGACGCAACAGGAGGAGGAGAGTAGATCTTGA |
Protein Sequence
|
MHPTKQFKINAKNYFLTYPKCSLTKDEALSQLQNLQTPTSKKYIKICREFHENGEPHLHVLIQFEGKFQCKNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYIHKDGDILEWGEFQIDGRSARGGQQSANDAYAAALNTGNKSEALSVLRELAPKDYVLQFHNLNANLDRIFTPPLEVYVSPFSSSSFDQVPEELEEWASENVVDAAARPLRPMSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNTALKNWTLKNAIFITLERPLYSGSNQSTAQGSEETQQEEESRS |
NCBI Accession
|
YP_009270648.1
|
Location
|
2127-2429 |
Gene Name
|
AC4 |
Protein Name
|
AC4 protein |
Coding Region
|
ATGGGGAACCTCATTTGCACGTGCTCATCCAGTTCGAGGGCAAATTCCAATGCAAAAATAACCGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCCACAAGGACGGAGACATTCTCGAATGGGGAGAATTTCAGATCGATGGGCGATCTGCAAGAGGAGGTCAACAATCAGCCAACGACGCTTACGCAGCAGCACTTAACACAGGCAATAAGTCAGAGGCTCTTAGCGTACTTAGGGAATTAG |
Protein Sequence
|
MGNLICTCSSSSRANSNAKITDSSTWYPQPGQHISIQTFRELNPAPTSSPTSTRTETFSNGENFRSMGDLQEEVNNQPTTLTQQHLTQAISQRLLAYLGN |