Malvastrum yellow vein Cambodia virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_000969115.1
Isolate Cambodia
Release date 2015/4/6
Submitter Tang,Y.F., He,Z.F.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_026763
ACCGGATGGCCGCGCGATTTTTTATTGTGGGTCCCCGCACTATTTTTTGTCTTCCAATAAAAACGCTCCCTCAAAGCTAGTTTAAAAAAAACCCGCTATAAATACTTGGTGGATAAGTAATAAGGATTTAAAATGTGGGATCCACTGTTGAACGAGTTTCCTGAAACTGTTCATGGTCTCCGGTGTATGCTTGCCGTAAAATATTGTCAGTTAATCGAACAGACATATTCTCCGGACACAGTGGGTTACGATCTTATACGAGATTTAATTTCAGTAATTCGTGCTCGCAATTATGTCGAAGCGACCCGCCGATATAGTCATTTCCACTCCCGCCTCGAAGGTACGACGCCGTCTGAACTTCGACACCCCCGTGATGAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACCAACAGAAAAAGGACATGGATCAACAGGCCCATGTATCGCAAGCCCAGACTCTTCAGAATGTACAGAAGCCCTGATGTCCCTAAAGGTTGTGAAGGCCCATGTAAAGTCCAATCTTATGAACAAAGGCACGACATATCTCATGTTGGTAAAGTATTATGTGTTAGTGATGTCACTCGTGGTAGTGGGCTTACTCATCGTGTTGGCAAGAGATTTTGTGTGAAGTCTGTTTATGTATTGGGTAAAATATGGATGGATGAAAATATAAAAACCAAGAACCATACGAACACTGTCATGTTTTATCTTGTTCGTGATAGAAGGCCCTTTGGTACTGCTATGGATTTTGGTCAGGTGTTTAACATGTATGATAATGAGCCCAGTACGGCTACTATAAAGAACGATCTTCGAGATCGTTATCAAGTTTTAAGGAAGTTCACTTCAACAGTCACAGGTGGTCAATATGCTTGTAAGGAACAAGCGTTGGTTAGGAAATTTATGAAAGTTAATAACCATGTAGTTTATAATCATCAAGAAGCTGCTAAGTATGACAATCATACTGAGAATGCCTTGTTATTGTATATGGCTTGTACTCATGCCAGTAATCCAGTGTATGCTACTTTGAAGATCAGAATCTATTTTTATGATTCTGTTCAAAATTAATAAAGATTGAATTTTATTATATTATAATGTGTTACATATTCTGTGTGTTCCAATACATCCCATAATACATGATTACATGCTCTAATTACATTGTTAATACTAATTACACCCAATCTATCTAAATATTTCATACATTGAACCCTAAATACTCTTAAGAAACGCCAGGTCTGAGGATGTAAACGAGTCCAGATTCGGAAGATTAGAAAACATTTGTGTATCCCCAACGCTTTCCTCAGGTTGTGATTGAACTGGACCTGGACTTCTATGATGTCGTGGTTCATCAGAAATGGCCTCTCGTGGTGCTGGGTCACTTTGAAATATAGGGGATTGTTGATTGTCCAGATATATACGCCATTCTCTGCTTGAGTTGCAGTGATGAGTTCCCCTGTGCGTGAATCCATATGATGCGCAATTAATTCCAATATAATATGAGCATCCACAAGGAAGATCAATCCGACGTCTCCGAATTGGCCTCTTCTTGGCTATTTTGTGATGGACTTTGACTGGTACCTGAGTACAATGGCTCTTTGAGGGTGAAAAATTCTGCATTCTTTAATGCCCAGTCTTTTAGTGATGAATTCTTGTCCTCGTCCAAGTACTCTTTATATGATGACGTTGGTCCTGGATTGCATAAGAAGATTGTCGGGATACCGCCTTTAATTTGAATTGGTTTCCCGTATTTCGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATGAATTCTTTGAAATGTTTCAGATAGTGGGGGTCGACGTCATCTATGACGTTATACCATGCGTCGTTGCTGTAGATCTTTGGGCTTAGATCTAGATGTCCGCACAAATAATTATGTGGGCCTAATGATCGAGCCCACATAGTTTTCCCTGTTCTACTCGCACCCTCTATCACTATACTCACGGGTCTCCAGGGCCGCGCAGCGGCATCCCTGACGTTTTCCGCTGCCCAGCATTCAAGTTCTTCTGGAACTTGATCGAAAGAAGAAGAAAGGAAAGGAGAAACAAAAACCTCTAAAGGAGGTGCAAAAATCCTATCTAAATTAGCATTTAAATTATGAAATTGTAATACATAATCTTTGGGTGCTAGTTCTTTGATTACATTAAGAGCCTCCGACTTACTTCCACTGTTAAGTGCTGCTGCGTAAGCGTCGTTGGCTGATTGTTGACCCCCTCTTGCTGATCGTCCGTCGATCTGGAATTCTCCCCATTCGAGAGTGTCTCCGTCCTTGTTGATGTAGGACTTGACGTCGGAGCTGGATTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCTGTTTGGGGATACCAGGTCGAAGAATCTGTTATTCGTGCAGTTGTATTTCCCTTCGAACTGTATAAGCACGTGGAGATGAGGGTTCCCATTTTGATGAAGCTCTCGACAGATTTTGATATATTTTTTATTTGTGGGGGTATTGAGGTTTTGTAATTGGGAAAGTGCTTCTTCTTTTGAAAGAGAGCATTCTGGATAAGTGAGGAAATAATTTTTGGCTTTTATAGAAAAACGACCTGTTCTAGGCATTGTGAATTGGGGGGCACTAAAAGTCCTATGCAATCGGGGGAACTAGGGGGCAATATATAGTGCCCCCCAAATGGCATTTACGTAAATACCTAAAGAAATTCAAAATTCATTCGCGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession YP_009129284.1
Location 133-483
Gene Name AV2
Protein Name AV2 protein
Coding Region ATGTGGGATCCACTGTTGAACGAGTTTCCTGAAACTGTTCATGGTCTCCGGTGTATGCTTGCCGTAAAATATTGTCAGTTAATCGAACAGACATATTCTCCGGACACAGTGGGTTACGATCTTATACGAGATTTAATTTCAGTAATTCGTGCTCGCAATTATGTCGAAGCGACCCGCCGATATAGTCATTTCCACTCCCGCCTCGAAGGTACGACGCCGTCTGAACTTCGACACCCCCGTGATGAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACCAACAGAAAAAGGACATGGATCAACAGGCCCATGTATCGCAAGCCCAGACTCTTCAGAATGTACAGAAGCCCTGA
Protein Sequence MWDPLLNEFPETVHGLRCMLAVKYCQLIEQTYSPDTVGYDLIRDLISVIRARNYVEATRRYSHFHSRLEGTTPSELRHPRDEPCCCPHCPRHQQKKDMDQQAHVSQAQTLQNVQKP

NCBI Accession YP_009129285.1
Location 293-1066
Gene Name AV1
Protein Name coat protein
Coding Region ATGTCGAAGCGACCCGCCGATATAGTCATTTCCACTCCCGCCTCGAAGGTACGACGCCGTCTGAACTTCGACACCCCCGTGATGAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACCAACAGAAAAAGGACATGGATCAACAGGCCCATGTATCGCAAGCCCAGACTCTTCAGAATGTACAGAAGCCCTGATGTCCCTAAAGGTTGTGAAGGCCCATGTAAAGTCCAATCTTATGAACAAAGGCACGACATATCTCATGTTGGTAAAGTATTATGTGTTAGTGATGTCACTCGTGGTAGTGGGCTTACTCATCGTGTTGGCAAGAGATTTTGTGTGAAGTCTGTTTATGTATTGGGTAAAATATGGATGGATGAAAATATAAAAACCAAGAACCATACGAACACTGTCATGTTTTATCTTGTTCGTGATAGAAGGCCCTTTGGTACTGCTATGGATTTTGGTCAGGTGTTTAACATGTATGATAATGAGCCCAGTACGGCTACTATAAAGAACGATCTTCGAGATCGTTATCAAGTTTTAAGGAAGTTCACTTCAACAGTCACAGGTGGTCAATATGCTTGTAAGGAACAAGCGTTGGTTAGGAAATTTATGAAAGTTAATAACCATGTAGTTTATAATCATCAAGAAGCTGCTAAGTATGACAATCATACTGAGAATGCCTTGTTATTGTATATGGCTTGTACTCATGCCAGTAATCCAGTGTATGCTACTTTGAAGATCAGAATCTATTTTTATGATTCTGTTCAAAATTAA
Protein Sequence MSKRPADIVISTPASKVRRRLNFDTPVMSRAAAPTVLVTNRKRTWINRPMYRKPRLFRMYRSPDVPKGCEGPCKVQSYEQRHDISHVGKVLCVSDVTRGSGLTHRVGKRFCVKSVYVLGKIWMDENIKTKNHTNTVMFYLVRDRRPFGTAMDFGQVFNMYDNEPSTATIKNDLRDRYQVLRKFTSTVTGGQYACKEQALVRKFMKVNNHVVYNHQEAAKYDNHTENALLLYMACTHASNPVYATLKIRIYFYDSVQN

NCBI Accession YP_009129286.1
Location 1063-1467
Gene Name AC3
Protein Name AC3 protein
Coding Region ATGGATTCACGCACAGGGGAACTCATCACTGCAACTCAAGCAGAGAATGGCGTATATATCTGGACAATCAACAATCCCCTATATTTCAAAGTGACCCAGCACCACGAGAGGCCATTTCTGATGAACCACGACATCATAGAAGTCCAGGTCCAGTTCAATCACAACCTGAGGAAAGCGTTGGGGATACACAAATGTTTTCTAATCTTCCGAATCTGGACTCGTTTACATCCTCAGACCTGGCGTTTCTTAAGAGTATTTAGGGTTCAATGTATGAAATATTTAGATAGATTGGGTGTAATTAGTATTAACAATGTAATTAGAGCATGTAATCATGTATTATGGGATGTATTGGAACACACAGAATATGTAACACATTATAATATAATAAAATTCAATCTTTATTAA
Protein Sequence MDSRTGELITATQAENGVYIWTINNPLYFKVTQHHERPFLMNHDIIEVQVQFNHNLRKALGIHKCFLIFRIWTRLHPQTWRFLRVFRVQCMKYLDRLGVISINNVIRACNHVLWDVLEHTEYVTHYNIIKFNLY

NCBI Accession YP_009129287.1
Location 1208-1615
Gene Name AC2
Protein Name AC2 protein
Coding Region ATGCAGAATTTTTCACCCTCAAAGAGCCATTGTACTCAGGTACCAGTCAAAGTCCATCACAAAATAGCCAAGAAGAGGCCAATTCGGAGACGTCGGATTGATCTTCCTTGTGGATGCTCATATTATATTGGAATTAATTGCGCATCATATGGATTCACGCACAGGGGAACTCATCACTGCAACTCAAGCAGAGAATGGCGTATATATCTGGACAATCAACAATCCCCTATATTTCAAAGTGACCCAGCACCACGAGAGGCCATTTCTGATGAACCACGACATCATAGAAGTCCAGGTCCAGTTCAATCACAACCTGAGGAAAGCGTTGGGGATACACAAATGTTTTCTAATCTTCCGAATCTGGACTCGTTTACATCCTCAGACCTGGCGTTTCTTAAGAGTATTTAG
Protein Sequence MQNFSPSKSHCTQVPVKVHHKIAKKRPIRRRRIDLPCGCSYYIGINCASYGFTHRGTHHCNSSREWRIYLDNQQSPIFQSDPAPREAISDEPRHHRSPGPVQSQPEESVGDTQMFSNLPNLDSFTSSDLAFLKSI

NCBI Accession YP_009129288.1
Location 1515-2603
Gene Name AC1
Protein Name rep protein
Coding Region ATGCCTAGAACAGGTCGTTTTTCTATAAAAGCCAAAAATTATTTCCTCACTTATCCAGAATGCTCTCTTTCAAAAGAAGAAGCACTTTCCCAATTACAAAACCTCAATACCCCCACAAATAAAAAATATATCAAAATCTGTCGAGAGCTTCATCAAAATGGGAACCCTCATCTCCACGTGCTTATACAGTTCGAAGGGAAATACAACTGCACGAATAACAGATTCTTCGACCTGGTATCCCCAAACAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCAACAAGGACGGAGACACTCTCGAATGGGGAGAATTCCAGATCGACGGACGATCAGCAAGAGGGGGTCAACAATCAGCCAACGACGCTTACGCAGCAGCACTTAACAGTGGAAGTAAGTCGGAGGCTCTTAATGTAATCAAAGAACTAGCACCCAAAGATTATGTATTACAATTTCATAATTTAAATGCTAATTTAGATAGGATTTTTGCACCTCCTTTAGAGGTTTTTGTTTCTCCTTTCCTTTCTTCTTCTTTCGATCAAGTTCCAGAAGAACTTGAATGCTGGGCAGCGGAAAACGTCAGGGATGCCGCTGCGCGGCCCTGGAGACCCGTGAGTATAGTGATAGAGGGTGCGAGTAGAACAGGGAAAACTATGTGGGCTCGATCATTAGGCCCACATAATTATTTGTGCGGACATCTAGATCTAAGCCCAAAGATCTACAGCAACGACGCATGGTATAACGTCATAGATGACGTCGACCCCCACTATCTGAAACATTTCAAAGAATTCATGGGGGCCCAAAGGGACTGGCAAAGCAACACGAAATACGGGAAACCAATTCAAATTAAAGGCGGTATCCCGACAATCTTCTTATGCAATCCAGGACCAACGTCATCATATAAAGAGTACTTGGACGAGGACAAGAATTCATCACTAAAAGACTGGGCATTAAAGAATGCAGAATTTTTCACCCTCAAAGAGCCATTGTACTCAGGTACCAGTCAAAGTCCATCACAAAATAGCCAAGAAGAGGCCAATTCGGAGACGTCGGATTGA
Protein Sequence MPRTGRFSIKAKNYFLTYPECSLSKEEALSQLQNLNTPTNKKYIKICRELHQNGNPHLHVLIQFEGKYNCTNNRFFDLVSPNRSAHFHPNIQGAKSSSDVKSYINKDGDTLEWGEFQIDGRSARGGQQSANDAYAAALNSGSKSEALNVIKELAPKDYVLQFHNLNANLDRIFAPPLEVFVSPFLSSSFDQVPEELECWAAENVRDAAARPWRPVSIVIEGASRTGKTMWARSLGPHNYLCGHLDLSPKIYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEDKNSSLKDWALKNAEFFTLKEPLYSGTSQSPSQNSQEEANSETSD

NCBI Accession YP_009129289.1
Location 2156-2446
Gene Name AC4
Protein Name AC4 protein
Coding Region ATGGGAACCCTCATCTCCACGTGCTTATACAGTTCGAAGGGAAATACAACTGCACGAATAACAGATTCTTCGACCTGGTATCCCCAAACAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCAACAAGGACGGAGACACTCTCGAATGGGGAGAATTCCAGATCGACGGACGATCAGCAAGAGGGGGTCAACAATCAGCCAACGACGCTTACGCAGCAGCACTTAACAGTGGAAGTAAGTCGGAGGCTCTTAATGTAA
Protein Sequence MGTLISTCLYSSKGNTTARITDSSTWYPQTGQHISIRTFRELNPAPTSSPTSTRTETLSNGENSRSTDDQQEGVNNQPTTLTQQHLTVEVSRRLLM