Malvastrum yellow mosaic virus
Basic Information
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCGCGATTTTTTTTGGTGGGCCCGCAACCAATCAGATGACGCGCTGAAAGCTTAAATAAATTTCCCGCTGTTATAAATACTTAGTGCCTAAGTATCCGCTTTGAAAATGTGGGATCCACTTGTAAACGAGTTTCCCGAAACGGTTCACGGGTTTCGGTGCATGCTTTCTATCAAATATCTTCAGTTACTCTCTGAAGGTTATTCTCCTGATACGGTTGGTTATGATCTAATACGTGAATTAATTTCAATTGTGCGTTCCAGGAATTATGTCGAAGCGTCCTGCAGATATCGTAATTTCTACCCCCGCGTCGAAGGTGCGTCGTCGTCTGAACTTCGACAGCCCTTACTCAACCCGTGTAGCTGTCCCCACTGTCCGCGTCACAAAATCTCGCATGTGGGCGAACAGGCCCATGAATCGCAAGCCCAGAATGTACAGGATGTACAAAAGCCCTGATGTTCCTCGTGGATGTGAAGGCCCGTGTAAAGTCCAGTCGTATGAAGCCCGTCATGATGTAGCCCATGTAGGTAAGGTACTGTGTGTGTCTGACGTTACCCGTGGTAATGGGCTGACCCATCGTGTTGGTAAGAGGTTTTGTATCAAGTCGATTTACGTTCTGGGCAAGGTCTGGATGGATGAGAACATCAAGAAGAAAAATCACACTAACACTGTTATGTTTTTCTTAGTTCGTGATCGGAGACCGTTTGGGACTCCCCAAGATTTCGGTCAGGTGTTTAATATGTATGATAATGAGCCTAGTACTGCCACTGTGAAGAACGATAATAGAGATCGTTTCCAGGTTTTGCGTCGATTTCAGGCAACGGTTACTGGTGGAGACTATGCGTGTAAAGAGCAAGCTTTAGTTAGGAAGTTTATGAAAGTTAACAATCATGTCACTTATAATCATCAGGAGGCAGCGAAGTATGATAACCATACTGAGAATGCGTTGTTGTTGTATATGGCATGTACTCATGCCAGTAACCCTGTGTATGCTACTTTGAAAATCAGGATCTACTTCTATGATTCTCTTCAAAATTAATAAAGATCGAATTTTATTTCTGAATTCATGTCTACATACATTGTTTGTTCTATTTTGTTCCATAATACATGATTGACAGCTCTAATAATTGAATTAATTGAGATTACACCGAGATTGTTGAGATATTTGAGGACTTGGGTTTTGAATACCCTTAAGAAAAGACCAATCGGAGGGTGTAAGGTCGTCCAGATTCGGTAGGTCAGAAAACACTTGTGCACTCCCAGAGCTCTCCGAAGGTTGTAGTTGAATTGGATTCTGATTGTTATGATGTCCATGTTCATCGTGAATGGACGGTTGTCGTGGCTTAGGATCTTGAAATAGAGGGGATTTTGAACCTCCCAGATATAGGCGCCACTCCATGCTTGAGCTGCAGTGATGGGTTCCCCTGTGCGTAAATCCATGGTTGAAACAGTTGATTGATAGGTAATAAGAACACCCGCATTCAAGATCTACTCTCCTCCTCCTGTTGCGTATCTTCGCTTCCCTGTGCTGTACTTTGATTGGAACCGGAGTACAGTGGTCCTTCGAGGGTGACGAAGATCGCATTCTTGAGAGTCCAGTTCTTTAATGCTGTGTTTTTTTCCTCGTTGAGGAATTCTTTATAACTGCTGTTTGGACCAGGATTGCACAGGAAGATTGTCGGTATCCCGCCTTTAATTTGAACTGGCTTTCCGTACTTTGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATGAATTCCTTGAAGTGCTTGAGGAAGTGCGGATCTACGTCATCAATGACGTTGTACCAGGCTTCATTGCTGTAGACCTTTGGGCTTAGATCCAGATGTCCACACAGATAATTGTGTGGGCCTAGTGACCTAGCCCACATCGTCTTCCCGGTACGACTGTCTCCCTCAATCACTATACTCATTGGTCTTAGGGGCCGCGCAGCGGCGTCGACGACGTTCTCCGACACCCACTCTTCAAGTTCTTCTGGAACTTGATCGAAAGAAGAAGAAAGAAAAGGAGAAACATAAACCTCCAACGGAGGTGTGAAGATCCTTTCTAAATTAGCATTTAGATTATGAAATTGTAAAACATAATCTTTGGGTGCTAACTCTTTAATCACATTAAGAGCCTCTGACTTACTGCCTGTGTTAAGTGCTGCGGCGTAAGCATCATTGGCTGATTGTTGTCCCCCTCTTGCAGATCGTCCGTCGATCTGAAACTCTCCCCATTCGAGGGTGTCTCCGTCCTTGTGGATGTAGGACTTGACGTCGGAGCTGGATTTAACTCCCTGGATGTTTGGATGGAAAAGTGCTGACCTGGTTGGGGATACCAGGTCGAAGAATCTGTTATTCTTGCACTGGTATTTCCCCTCGAACTGAATAAGCACGTGGAGATGAGGGTTCCCATTTTGGTGGAGCTCTCTGCAGATTTTGATGTATTTTTTATTTGTTGGGGTTTCTAGGTTTTGAAGTTGTGAAAGTGCTTCTTCTTTAGTTAAAGAGCACTCAGGATATGTAAGAAAATAATTTTTGGCATTTATTTTGAATTTATTTGGGGGAGCCATTGACTAGTCAATTGGTGTCTCACAAACTTAGCTATGCAATCGGTGTCTGGGGTCTTATTTATAGGTAGACACCAAATGGCATTTTCGTAAATCCTCAAAGAATTTCAAAATCTTACGCTCCAAAAAGCGGCCATCCGTCTAATATT
Gene Information
NCBI Accession
|
YP_851007.1
|
Location
|
118-465 |
Gene Name
|
AV2 |
Protein Name
|
AV2 protein |
Coding Region
|
ATGTGGGATCCACTTGTAAACGAGTTTCCCGAAACGGTTCACGGGTTTCGGTGCATGCTTTCTATCAAATATCTTCAGTTACTCTCTGAAGGTTATTCTCCTGATACGGTTGGTTATGATCTAATACGTGAATTAATTTCAATTGTGCGTTCCAGGAATTATGTCGAAGCGTCCTGCAGATATCGTAATTTCTACCCCCGCGTCGAAGGTGCGTCGTCGTCTGAACTTCGACAGCCCTTACTCAACCCGTGTAGCTGTCCCCACTGTCCGCGTCACAAAATCTCGCATGTGGGCGAACAGGCCCATGAATCGCAAGCCCAGAATGTACAGGATGTACAAAAGCCCTGA |
Protein Sequence
|
MWDPLVNEFPETVHGFRCMLSIKYLQLLSEGYSPDTVGYDLIRELISIVRSRNYVEASCRYRNFYPRVEGASSSELRQPLLNPCSCPHCPRHKISHVGEQAHESQAQNVQDVQKP |
NCBI Accession
|
YP_851008.1
|
Location
|
278-1048 |
Gene Name
|
AV1 |
Protein Name
|
coat protein |
Coding Region
|
ATGTCGAAGCGTCCTGCAGATATCGTAATTTCTACCCCCGCGTCGAAGGTGCGTCGTCGTCTGAACTTCGACAGCCCTTACTCAACCCGTGTAGCTGTCCCCACTGTCCGCGTCACAAAATCTCGCATGTGGGCGAACAGGCCCATGAATCGCAAGCCCAGAATGTACAGGATGTACAAAAGCCCTGATGTTCCTCGTGGATGTGAAGGCCCGTGTAAAGTCCAGTCGTATGAAGCCCGTCATGATGTAGCCCATGTAGGTAAGGTACTGTGTGTGTCTGACGTTACCCGTGGTAATGGGCTGACCCATCGTGTTGGTAAGAGGTTTTGTATCAAGTCGATTTACGTTCTGGGCAAGGTCTGGATGGATGAGAACATCAAGAAGAAAAATCACACTAACACTGTTATGTTTTTCTTAGTTCGTGATCGGAGACCGTTTGGGACTCCCCAAGATTTCGGTCAGGTGTTTAATATGTATGATAATGAGCCTAGTACTGCCACTGTGAAGAACGATAATAGAGATCGTTTCCAGGTTTTGCGTCGATTTCAGGCAACGGTTACTGGTGGAGACTATGCGTGTAAAGAGCAAGCTTTAGTTAGGAAGTTTATGAAAGTTAACAATCATGTCACTTATAATCATCAGGAGGCAGCGAAGTATGATAACCATACTGAGAATGCGTTGTTGTTGTATATGGCATGTACTCATGCCAGTAACCCTGTGTATGCTACTTTGAAAATCAGGATCTACTTCTATGATTCTCTTCAAAATTAA |
Protein Sequence
|
MSKRPADIVISTPASKVRRRLNFDSPYSTRVAVPTVRVTKSRMWANRPMNRKPRMYRMYKSPDVPRGCEGPCKVQSYEARHDVAHVGKVLCVSDVTRGNGLTHRVGKRFCIKSIYVLGKVWMDENIKKKNHTNTVMFFLVRDRRPFGTPQDFGQVFNMYDNEPSTATVKNDNRDRFQVLRRFQATVTGGDYACKEQALVRKFMKVNNHVTYNHQEAAKYDNHTENALLLYMACTHASNPVYATLKIRIYFYDSLQN |
NCBI Accession
|
YP_851009.1
|
Location
|
1045-1449 |
Gene Name
|
AC3 |
Protein Name
|
AC3 protein |
Coding Region
|
ATGGATTTACGCACAGGGGAACCCATCACTGCAGCTCAAGCATGGAGTGGCGCCTATATCTGGGAGGTTCAAAATCCCCTCTATTTCAAGATCCTAAGCCACGACAACCGTCCATTCACGATGAACATGGACATCATAACAATCAGAATCCAATTCAACTACAACCTTCGGAGAGCTCTGGGAGTGCACAAGTGTTTTCTGACCTACCGAATCTGGACGACCTTACACCCTCCGATTGGTCTTTTCTTAAGGGTATTCAAAACCCAAGTCCTCAAATATCTCAACAATCTCGGTGTAATCTCAATTAATTCAATTATTAGAGCTGTCAATCATGTATTATGGAACAAAATAGAACAAACAATGTATGTAGACATGAATTCAGAAATAAAATTCGATCTTTATTAA |
Protein Sequence
|
MDLRTGEPITAAQAWSGAYIWEVQNPLYFKILSHDNRPFTMNMDIITIRIQFNYNLRRALGVHKCFLTYRIWTTLHPPIGLFLRVFKTQVLKYLNNLGVISINSIIRAVNHVLWNKIEQTMYVDMNSEIKFDLY |
NCBI Accession
|
YP_851010.1
|
Location
|
1142-1594 |
Gene Name
|
AC2 |
Protein Name
|
AC2 protein |
Coding Region
|
ATGCGATCTTCGTCACCCTCGAAGGACCACTGTACTCCGGTTCCAATCAAAGTACAGCACAGGGAAGCGAAGATACGCAACAGGAGGAGGAGAGTAGATCTTGAATGCGGGTGTTCTTATTACCTATCAATCAACTGTTTCAACCATGGATTTACGCACAGGGGAACCCATCACTGCAGCTCAAGCATGGAGTGGCGCCTATATCTGGGAGGTTCAAAATCCCCTCTATTTCAAGATCCTAAGCCACGACAACCGTCCATTCACGATGAACATGGACATCATAACAATCAGAATCCAATTCAACTACAACCTTCGGAGAGCTCTGGGAGTGCACAAGTGTTTTCTGACCTACCGAATCTGGACGACCTTACACCCTCCGATTGGTCTTTTCTTAAGGGTATTCAAAACCCAAGTCCTCAAATATCTCAACAATCTCGGTGTAATCTCAATTAA |
Protein Sequence
|
MRSSSPSKDHCTPVPIKVQHREAKIRNRRRRVDLECGCSYYLSINCFNHGFTHRGTHHCSSSMEWRLYLGGSKSPLFQDPKPRQPSIHDEHGHHNNQNPIQLQPSESSGSAQVFSDLPNLDDLTPSDWSFLKGIQNPSPQISQQSRCNLN |
NCBI Accession
|
YP_851011.1
|
Location
|
1491-2582 |
Gene Name
|
AC1 |
Protein Name
|
replication protein |
Coding Region
|
ATGGCTCCCCCAAATAAATTCAAAATAAATGCCAAAAATTATTTTCTTACATATCCTGAGTGCTCTTTAACTAAAGAAGAAGCACTTTCACAACTTCAAAACCTAGAAACCCCAACAAATAAAAAATACATCAAAATCTGCAGAGAGCTCCACCAAAATGGGAACCCTCATCTCCACGTGCTTATTCAGTTCGAGGGGAAATACCAGTGCAAGAATAACAGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACTTTTCCATCCAAACATCCAGGGAGTTAAATCCAGCTCCGACGTCAAGTCCTACATCCACAAGGACGGAGACACCCTCGAATGGGGAGAGTTTCAGATCGACGGACGATCTGCAAGAGGGGGACAACAATCAGCCAATGATGCTTACGCCGCAGCACTTAACACAGGCAGTAAGTCAGAGGCTCTTAATGTGATTAAAGAGTTAGCACCCAAAGATTATGTTTTACAATTTCATAATCTAAATGCTAATTTAGAAAGGATCTTCACACCTCCGTTGGAGGTTTATGTTTCTCCTTTTCTTTCTTCTTCTTTCGATCAAGTTCCAGAAGAACTTGAAGAGTGGGTGTCGGAGAACGTCGTCGACGCCGCTGCGCGGCCCCTAAGACCAATGAGTATAGTGATTGAGGGAGACAGTCGTACCGGGAAGACGATGTGGGCTAGGTCACTAGGCCCACACAATTATCTGTGTGGACATCTGGATCTAAGCCCAAAGGTCTACAGCAATGAAGCCTGGTACAACGTCATTGATGACGTAGATCCGCACTTCCTCAAGCACTTCAAGGAATTCATGGGGGCCCAAAGGGACTGGCAAAGCAACACAAAGTACGGAAAGCCAGTTCAAATTAAAGGCGGGATACCGACAATCTTCCTGTGCAATCCTGGTCCAAACAGCAGTTATAAAGAATTCCTCAACGAGGAAAAAAACACAGCATTAAAGAACTGGACTCTCAAGAATGCGATCTTCGTCACCCTCGAAGGACCACTGTACTCCGGTTCCAATCAAAGTACAGCACAGGGAAGCGAAGATACGCAACAGGAGGAGGAGAGTAGATCTTGA |
Protein Sequence
|
MAPPNKFKINAKNYFLTYPECSLTKEEALSQLQNLETPTNKKYIKICRELHQNGNPHLHVLIQFEGKYQCKNNRFFDLVSPTRSALFHPNIQGVKSSSDVKSYIHKDGDTLEWGEFQIDGRSARGGQQSANDAYAAALNTGSKSEALNVIKELAPKDYVLQFHNLNANLERIFTPPLEVYVSPFLSSSFDQVPEELEEWVSENVVDAAARPLRPMSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNEAWYNVIDDVDPHFLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLNEEKNTALKNWTLKNAIFVTLEGPLYSGSNQSTAQGSEDTQQEEESRS |
NCBI Accession
|
YP_851012.1
|
Location
|
2135-2425 |
Gene Name
|
AC4 |
Protein Name
|
AC4 protein |
Coding Region
|
ATGGGAACCCTCATCTCCACGTGCTTATTCAGTTCGAGGGGAAATACCAGTGCAAGAATAACAGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACTTTTCCATCCAAACATCCAGGGAGTTAAATCCAGCTCCGACGTCAAGTCCTACATCCACAAGGACGGAGACACCCTCGAATGGGGAGAGTTTCAGATCGACGGACGATCTGCAAGAGGGGGACAACAATCAGCCAATGATGCTTACGCCGCAGCACTTAACACAGGCAGTAAGTCAGAGGCTCTTAATGTGA |
Protein Sequence
|
MGTLISTCLFSSRGNTSARITDSSTWYPQPGQHFSIQTSRELNPAPTSSPTSTRTETPSNGESFRSTDDLQEGDNNQPMMLTPQHLTQAVSQRLLM |