Allamanda leaf curl virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_000874545.1
Isolate China
Release date 2015/2/13
Submitter He,Z.F., Mao,M.J., Yu,H., Li,H.P., Chen,X.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_010947
ACCGGAAGGCCCGCCGCCCATTTTAAAGTGGGCCCCCCCACTAAGTTTTGTCGGCCGATGGGAACGCTCCCTCAGAGTCTCTTTAAATGTACGTGTATGTATTTATACTTTTGTCTCTGTACCCTATACGTATTAAAATGTGGGACCCACTGGTCAATGAATTTCCAGAAACTGTACATGGTTTCAGGTCTATGCTTGCAATCAAGTATTTGCAGCTTGTAGAGGCTACGTATTCTCCCGATACGTTGGGGTACGATCTTATACGAGATCTCATACTGGTATTGCGAGCTAGGAGCTATGTCGAAGCGACCCGCCGATATAGTCATTTCCACACCCGCTTCCAAGGTGCGTCGGCGTCTGAACTTCGACAGCCCATACACCAGCCGTGCTGTTGCCCCCACTGTCCTCGTCACAAAGAAAAGGAGATTATGGGCCAATCGGCCCATGTACCGGAAGCCCAGACTGTACAGAATGTACAGAAGCCCTGATGTTCCTAGGGGCTGTGAAGGCCCATGTAAGGTCCAGTCGTTTGAACAGAGGCATGACATAGCCCATACTGGGAAGGTTTTGTGTATTTCTGATGTTACTAGGGGTAATGGTATTACCCATAGGGTAGGAAAGAGGTTTTGTATTAAGTCTGTTTATATTTTAGGCAAAGTGTGGATGGATGAGAATATTAAGACCAAGAACCACACGAATAGTGTTATGTTTTTTATTGTTAGGGATAGACGTCCGTTTGGTACTCCAATGGATTTTGGACAGGTTTTTAATATGTATGACAATGAGCCCAGTACTGCTACTATCAAGAACGATCTCAGGGATCGTTATCAGGTGCTGCATCCGTTTGTGTATACGGTTACCGGTGGTCAGTATGCGTCCAAGGAACAGGCATTGGTCAGGAAGTTCTACAGGATTTACCAGCGTGTTACATACAACCATCAGGAAGATGCTAAATATGAGAACCACACTGAAAATGCTTTGTTGTTGTATATGGCATGTACTCATGCCTCAAATCCTGTGTATGCTACTTTGAAGATTCGAATCTATTTTTACGATTCGACTCAGAATTAATAAACATTAAATTTTATTTCATGATCTTCAATTACATCAATTGTCTGTTCTATTACATCGTTGAGTACATAATTGAAAGCCCTAATACAATTGTTGATACTAATTACACCTAGACTATCTAAGTACTTCAGTACATGGGTTCTAAAAACCCTTAAGAAACGCCAGGTCTGAGGACGTAAGGCTGTGTAGATCTTCAAGTTCAGGAAGCACTTGTGAATCCCCAGTTGCTTCCTGAGGTTGTGGTTGAATCTGACTTGGACATGGATGATGTCGTGGTTCCTGAAGAACGTCCTCTTGGTGTGTTCCATGATCTTGAAATAGAGGGGATTTGGCACCGTCCAGATATATGCGCCATTCCTTGCTTGAGCCGCAGTGATGCTCTCCCCGGTGCGTGAATCCATGGTCCGCACGGTTTATTGCCTTGTATATGCTGCAGCCGCAAGGAAGATCGAGTCTTCGTCTTCTAATCGGTCTGTGCTTGGCTATTCGGTGTTGCACCTTGACCGGAATAGAGTGGCTCCTCGAGGGTGATGAATGTTGCATTTTTTAGTGCCCACGCCTTTAATGCAGCATTTTTGTCCTCGTCCAAGTACTCTTTATATGATGATGTCGGTCCTGGATTGCAGAGGAAGATTGTAGGGATCCCACCTTTAATTTGAATTGGTTTCCCGTACTTCGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATGAATTCTTTAAAGTGCTTTAGGTAGTGGGGGTCGACATCATCAATGACGTTGTACCACGCGTCATTTGAATAAACCTTAGGGCTTAAGTCCAGGTGACCACACAAATAATTGTGTGGACCTAACGACCTAGCCCACATGGTCTTGCCGGTACGACTATCGCCCTCTATTACAATACTAATCGGTCTCCAAGGCCGCGCAGCGGCACTCTTCACATTCTCAGAGACCCAGACCCCAAGTTCCTCGGGAACTTGATTAAAAGAAGAAGAAAGAAAAGGAGAAACATAAACCTCCAATGGAGGTGTAAAAATCCTATCTAAATTTGAATTTAAATTATGAAACTGAAAAATATAATCTTTTGGGAGTTTCTCCCTTATTATTGCTAATGCAGCTTCTTTTGAACCTGCATTTAACGCCTCTGCACATGCGTCATTAGCATTCTGGCAGCCTCCCCTAGCACTTCTTCCGTCGACCTGGAACTGACCCCATTCAATGGTGTCTCCATCCTTGTCGATGTAGGACTTGACATCGGAGCTGGATTTAGCTCCCTGAATGTTTGGATGGAAATGTGTTGACCGGGTTGGGGATACCAGGTCGAAGAATCTCTGATTCGTGCAGTTGAATTTGCCTTCGAACTGCACGAGCACGTGGAGATGAGGGCTCCCATCCTCGTGCAATTCTCTGCAAATTTTTATGAATTTTTTATTGGTAGGGGTTTGCAGGTTCTGTAATTGGGAAAGTGCTTCCTCTTTGGTGAGAGAGCACTGTGGGTATGTTAAGAAATAATTTTTGGCTTTAATAGAGAAACGGCCGGCACGAGGCATTTTGGAATTGGGGGGCACTCAAAGTCTGAGGAATCGGGGGAACTGGGGGGCAATTTATATGGTGCCCCCCAAATGGCATTTTGGGAATTTCTGAAAAGATTTGAATTTCAAAATTCAAAATTCAAATTCTTAGCGGGCCTTCCGTATAATATT

Gene Information

NCBI Accession YP_001974393.1
Location 138-488
Gene Name AV2
Protein Name AV2 protein
Coding Region ATGTGGGACCCACTGGTCAATGAATTTCCAGAAACTGTACATGGTTTCAGGTCTATGCTTGCAATCAAGTATTTGCAGCTTGTAGAGGCTACGTATTCTCCCGATACGTTGGGGTACGATCTTATACGAGATCTCATACTGGTATTGCGAGCTAGGAGCTATGTCGAAGCGACCCGCCGATATAGTCATTTCCACACCCGCTTCCAAGGTGCGTCGGCGTCTGAACTTCGACAGCCCATACACCAGCCGTGCTGTTGCCCCCACTGTCCTCGTCACAAAGAAAAGGAGATTATGGGCCAATCGGCCCATGTACCGGAAGCCCAGACTGTACAGAATGTACAGAAGCCCTGA
Protein Sequence MWDPLVNEFPETVHGFRSMLAIKYLQLVEATYSPDTLGYDLIRDLILVLRARSYVEATRRYSHFHTRFQGASASELRQPIHQPCCCPHCPRHKEKEIMGQSAHVPEAQTVQNVQKP

NCBI Accession YP_001974394.1
Location 298-1071
Gene Name AV1
Protein Name capsid protein
Coding Region ATGTCGAAGCGACCCGCCGATATAGTCATTTCCACACCCGCTTCCAAGGTGCGTCGGCGTCTGAACTTCGACAGCCCATACACCAGCCGTGCTGTTGCCCCCACTGTCCTCGTCACAAAGAAAAGGAGATTATGGGCCAATCGGCCCATGTACCGGAAGCCCAGACTGTACAGAATGTACAGAAGCCCTGATGTTCCTAGGGGCTGTGAAGGCCCATGTAAGGTCCAGTCGTTTGAACAGAGGCATGACATAGCCCATACTGGGAAGGTTTTGTGTATTTCTGATGTTACTAGGGGTAATGGTATTACCCATAGGGTAGGAAAGAGGTTTTGTATTAAGTCTGTTTATATTTTAGGCAAAGTGTGGATGGATGAGAATATTAAGACCAAGAACCACACGAATAGTGTTATGTTTTTTATTGTTAGGGATAGACGTCCGTTTGGTACTCCAATGGATTTTGGACAGGTTTTTAATATGTATGACAATGAGCCCAGTACTGCTACTATCAAGAACGATCTCAGGGATCGTTATCAGGTGCTGCATCCGTTTGTGTATACGGTTACCGGTGGTCAGTATGCGTCCAAGGAACAGGCATTGGTCAGGAAGTTCTACAGGATTTACCAGCGTGTTACATACAACCATCAGGAAGATGCTAAATATGAGAACCACACTGAAAATGCTTTGTTGTTGTATATGGCATGTACTCATGCCTCAAATCCTGTGTATGCTACTTTGAAGATTCGAATCTATTTTTACGATTCGACTCAGAATTAA
Protein Sequence MSKRPADIVISTPASKVRRRLNFDSPYTSRAVAPTVLVTKKRRLWANRPMYRKPRLYRMYRSPDVPRGCEGPCKVQSFEQRHDIAHTGKVLCISDVTRGNGITHRVGKRFCIKSVYILGKVWMDENIKTKNHTNSVMFFIVRDRRPFGTPMDFGQVFNMYDNEPSTATIKNDLRDRYQVLHPFVYTVTGGQYASKEQALVRKFYRIYQRVTYNHQEDAKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSTQN

NCBI Accession YP_001974395.1
Location 1068-1472
Gene Name AC3
Protein Name AC3 protein
Coding Region ATGGATTCACGCACCGGGGAGAGCATCACTGCGGCTCAAGCAAGGAATGGCGCATATATCTGGACGGTGCCAAATCCCCTCTATTTCAAGATCATGGAACACACCAAGAGGACGTTCTTCAGGAACCACGACATCATCCATGTCCAAGTCAGATTCAACCACAACCTCAGGAAGCAACTGGGGATTCACAAGTGCTTCCTGAACTTGAAGATCTACACAGCCTTACGTCCTCAGACCTGGCGTTTCTTAAGGGTTTTTAGAACCCATGTACTGAAGTACTTAGATAGTCTAGGTGTAATTAGTATCAACAATTGTATTAGGGCTTTCAATTATGTACTCAACGATGTAATAGAACAGACAATTGATGTAATTGAAGATCATGAAATAAAATTTAATGTTTATTAA
Protein Sequence MDSRTGESITAAQARNGAYIWTVPNPLYFKIMEHTKRTFFRNHDIIHVQVRFNHNLRKQLGIHKCFLNLKIYTALRPQTWRFLRVFRTHVLKYLDSLGVISINNCIRAFNYVLNDVIEQTIDVIEDHEIKFNVY

NCBI Accession YP_001974396.1
Location 1213-1614
Gene Name AC2
Protein Name AC2 protein
Coding Region ATGCAACATTCATCACCCTCGAGGAGCCACTCTATTCCGGTCAAGGTGCAACACCGAATAGCCAAGCACAGACCGATTAGAAGACGAAGACTCGATCTTCCTTGCGGCTGCAGCATATACAAGGCAATAAACCGTGCGGACCATGGATTCACGCACCGGGGAGAGCATCACTGCGGCTCAAGCAAGGAATGGCGCATATATCTGGACGGTGCCAAATCCCCTCTATTTCAAGATCATGGAACACACCAAGAGGACGTTCTTCAGGAACCACGACATCATCCATGTCCAAGTCAGATTCAACCACAACCTCAGGAAGCAACTGGGGATTCACAAGTGCTTCCTGAACTTGAAGATCTACACAGCCTTACGTCCTCAGACCTGGCGTTTCTTAAGGGTTTTTAG
Protein Sequence MQHSSPSRSHSIPVKVQHRIAKHRPIRRRRLDLPCGCSIYKAINRADHGFTHRGEHHCGSSKEWRIYLDGAKSPLFQDHGTHQEDVLQEPRHHPCPSQIQPQPQEATGDSQVLPELEDLHSLTSSDLAFLKGF

NCBI Accession YP_001974397.1
Location 1535-2602
Gene Name AC1
Protein Name AC1 protein
Coding Region ATGCCTCGTGCCGGCCGTTTCTCTATTAAAGCCAAAAATTATTTCTTAACATACCCACAGTGCTCTCTCACCAAAGAGGAAGCACTTTCCCAATTACAGAACCTGCAAACCCCTACCAATAAAAAATTCATAAAAATTTGCAGAGAATTGCACGAGGATGGGAGCCCTCATCTCCACGTGCTCGTGCAGTTCGAAGGCAAATTCAACTGCACGAATCAGAGATTCTTCGACCTGGTATCCCCAACCCGGTCAACACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGATGTCAAGTCCTACATCGACAAGGATGGAGACACCATTGAATGGGGTCAGTTCCAGGTCGACGGAAGAAGTGCTAGGGGAGGCTGCCAGAATGCTAATGACGCATGTGCAGAGGCGTTAAATGCAGGTTCAAAAGAAGCTGCATTAGCAATAATAAGGGAGAAACTCCCAAAAGATTATATTTTTCAGTTTCATAATTTAAATTCAAATTTAGATAGGATTTTTACACCTCCATTGGAGGTTTATGTTTCTCCTTTTCTTTCTTCTTCTTTTAATCAAGTTCCCGAGGAACTTGGGGTCTGGGTCTCTGAGAATGTGAAGAGTGCCGCTGCGCGGCCTTGGAGACCGATTAGTATTGTAATAGAGGGCGATAGTCGTACCGGCAAGACCATGTGGGCTAGGTCGTTAGGTCCACACAATTATTTGTGTGGTCACCTGGACTTAAGCCCTAAGGTTTATTCAAATGACGCGTGGTACAACGTCATTGATGATGTCGACCCCCACTACCTAAAGCACTTTAAAGAATTCATGGGGGCCCAAAGGGACTGGCAAAGCAACACGAAGTACGGGAAACCAATTCAAATTAAAGGTGGGATCCCTACAATCTTCCTCTGCAATCCAGGACCGACATCATCATATAAAGAGTACTTGGACGAGGACAAAAATGCTGCATTAAAGGCGTGGGCACTAAAAAATGCAACATTCATCACCCTCGAGGAGCCACTCTATTCCGGTCAAGGTGCAACACCGAATAGCCAAGCACAGACCGATTAG
Protein Sequence MPRAGRFSIKAKNYFLTYPQCSLTKEEALSQLQNLQTPTNKKFIKICRELHEDGSPHLHVLVQFEGKFNCTNQRFFDLVSPTRSTHFHPNIQGAKSSSDVKSYIDKDGDTIEWGQFQVDGRSARGGCQNANDACAEALNAGSKEAALAIIREKLPKDYIFQFHNLNSNLDRIFTPPLEVYVSPFLSSSFNQVPEELGVWVSENVKSAAARPWRPISIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEDKNAALKAWALKNATFITLEEPLYSGQGATPNSQAQTD

NCBI Accession YP_001974398.1
Location 2188-2445
Gene Name AC4
Protein Name AC4 protein
Coding Region ATGGGAGCCCTCATCTCCACGTGCTCGTGCAGTTCGAAGGCAAATTCAACTGCACGAATCAGAGATTCTTCGACCTGGTATCCCCAACCCGGTCAACACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGATGTCAAGTCCTACATCGACAAGGATGGAGACACCATTGAATGGGGTCAGTTCCAGGTCGACGGAAGAAGTGCTAGGGGAGGCTGCCAGAATGCTAATGACGCATGTGCAGAGGCGTTAA
Protein Sequence MGALISTCSCSSKANSTARIRDSSTWYPQPGQHISIQTFRELNPAPMSSPTSTRMETPLNGVSSRSTEEVLGEAARMLMTHVQRR