Allamanda leaf curl virus
Basic Information
Genus |
Begomovirus
|
NCBI Assembly |
GCF_000874545.1 |
Isolate |
China |
Release date |
2015/2/13 |
Submitter |
He,Z.F., Mao,M.J., Yu,H., Li,H.P., Chen,X. |
Host |
|
Vector |
|
Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGAAGGCCCGCCGCCCATTTTAAAGTGGGCCCCCCCACTAAGTTTTGTCGGCCGATGGGAACGCTCCCTCAGAGTCTCTTTAAATGTACGTGTATGTATTTATACTTTTGTCTCTGTACCCTATACGTATTAAAATGTGGGACCCACTGGTCAATGAATTTCCAGAAACTGTACATGGTTTCAGGTCTATGCTTGCAATCAAGTATTTGCAGCTTGTAGAGGCTACGTATTCTCCCGATACGTTGGGGTACGATCTTATACGAGATCTCATACTGGTATTGCGAGCTAGGAGCTATGTCGAAGCGACCCGCCGATATAGTCATTTCCACACCCGCTTCCAAGGTGCGTCGGCGTCTGAACTTCGACAGCCCATACACCAGCCGTGCTGTTGCCCCCACTGTCCTCGTCACAAAGAAAAGGAGATTATGGGCCAATCGGCCCATGTACCGGAAGCCCAGACTGTACAGAATGTACAGAAGCCCTGATGTTCCTAGGGGCTGTGAAGGCCCATGTAAGGTCCAGTCGTTTGAACAGAGGCATGACATAGCCCATACTGGGAAGGTTTTGTGTATTTCTGATGTTACTAGGGGTAATGGTATTACCCATAGGGTAGGAAAGAGGTTTTGTATTAAGTCTGTTTATATTTTAGGCAAAGTGTGGATGGATGAGAATATTAAGACCAAGAACCACACGAATAGTGTTATGTTTTTTATTGTTAGGGATAGACGTCCGTTTGGTACTCCAATGGATTTTGGACAGGTTTTTAATATGTATGACAATGAGCCCAGTACTGCTACTATCAAGAACGATCTCAGGGATCGTTATCAGGTGCTGCATCCGTTTGTGTATACGGTTACCGGTGGTCAGTATGCGTCCAAGGAACAGGCATTGGTCAGGAAGTTCTACAGGATTTACCAGCGTGTTACATACAACCATCAGGAAGATGCTAAATATGAGAACCACACTGAAAATGCTTTGTTGTTGTATATGGCATGTACTCATGCCTCAAATCCTGTGTATGCTACTTTGAAGATTCGAATCTATTTTTACGATTCGACTCAGAATTAATAAACATTAAATTTTATTTCATGATCTTCAATTACATCAATTGTCTGTTCTATTACATCGTTGAGTACATAATTGAAAGCCCTAATACAATTGTTGATACTAATTACACCTAGACTATCTAAGTACTTCAGTACATGGGTTCTAAAAACCCTTAAGAAACGCCAGGTCTGAGGACGTAAGGCTGTGTAGATCTTCAAGTTCAGGAAGCACTTGTGAATCCCCAGTTGCTTCCTGAGGTTGTGGTTGAATCTGACTTGGACATGGATGATGTCGTGGTTCCTGAAGAACGTCCTCTTGGTGTGTTCCATGATCTTGAAATAGAGGGGATTTGGCACCGTCCAGATATATGCGCCATTCCTTGCTTGAGCCGCAGTGATGCTCTCCCCGGTGCGTGAATCCATGGTCCGCACGGTTTATTGCCTTGTATATGCTGCAGCCGCAAGGAAGATCGAGTCTTCGTCTTCTAATCGGTCTGTGCTTGGCTATTCGGTGTTGCACCTTGACCGGAATAGAGTGGCTCCTCGAGGGTGATGAATGTTGCATTTTTTAGTGCCCACGCCTTTAATGCAGCATTTTTGTCCTCGTCCAAGTACTCTTTATATGATGATGTCGGTCCTGGATTGCAGAGGAAGATTGTAGGGATCCCACCTTTAATTTGAATTGGTTTCCCGTACTTCGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATGAATTCTTTAAAGTGCTTTAGGTAGTGGGGGTCGACATCATCAATGACGTTGTACCACGCGTCATTTGAATAAACCTTAGGGCTTAAGTCCAGGTGACCACACAAATAATTGTGTGGACCTAACGACCTAGCCCACATGGTCTTGCCGGTACGACTATCGCCCTCTATTACAATACTAATCGGTCTCCAAGGCCGCGCAGCGGCACTCTTCACATTCTCAGAGACCCAGACCCCAAGTTCCTCGGGAACTTGATTAAAAGAAGAAGAAAGAAAAGGAGAAACATAAACCTCCAATGGAGGTGTAAAAATCCTATCTAAATTTGAATTTAAATTATGAAACTGAAAAATATAATCTTTTGGGAGTTTCTCCCTTATTATTGCTAATGCAGCTTCTTTTGAACCTGCATTTAACGCCTCTGCACATGCGTCATTAGCATTCTGGCAGCCTCCCCTAGCACTTCTTCCGTCGACCTGGAACTGACCCCATTCAATGGTGTCTCCATCCTTGTCGATGTAGGACTTGACATCGGAGCTGGATTTAGCTCCCTGAATGTTTGGATGGAAATGTGTTGACCGGGTTGGGGATACCAGGTCGAAGAATCTCTGATTCGTGCAGTTGAATTTGCCTTCGAACTGCACGAGCACGTGGAGATGAGGGCTCCCATCCTCGTGCAATTCTCTGCAAATTTTTATGAATTTTTTATTGGTAGGGGTTTGCAGGTTCTGTAATTGGGAAAGTGCTTCCTCTTTGGTGAGAGAGCACTGTGGGTATGTTAAGAAATAATTTTTGGCTTTAATAGAGAAACGGCCGGCACGAGGCATTTTGGAATTGGGGGGCACTCAAAGTCTGAGGAATCGGGGGAACTGGGGGGCAATTTATATGGTGCCCCCCAAATGGCATTTTGGGAATTTCTGAAAAGATTTGAATTTCAAAATTCAAAATTCAAATTCTTAGCGGGCCTTCCGTATAATATT
Gene Information
NCBI Accession
|
YP_001974393.1
|
Location
|
138-488 |
Gene Name
|
AV2 |
Protein Name
|
AV2 protein |
Coding Region
|
ATGTGGGACCCACTGGTCAATGAATTTCCAGAAACTGTACATGGTTTCAGGTCTATGCTTGCAATCAAGTATTTGCAGCTTGTAGAGGCTACGTATTCTCCCGATACGTTGGGGTACGATCTTATACGAGATCTCATACTGGTATTGCGAGCTAGGAGCTATGTCGAAGCGACCCGCCGATATAGTCATTTCCACACCCGCTTCCAAGGTGCGTCGGCGTCTGAACTTCGACAGCCCATACACCAGCCGTGCTGTTGCCCCCACTGTCCTCGTCACAAAGAAAAGGAGATTATGGGCCAATCGGCCCATGTACCGGAAGCCCAGACTGTACAGAATGTACAGAAGCCCTGA |
Protein Sequence
|
MWDPLVNEFPETVHGFRSMLAIKYLQLVEATYSPDTLGYDLIRDLILVLRARSYVEATRRYSHFHTRFQGASASELRQPIHQPCCCPHCPRHKEKEIMGQSAHVPEAQTVQNVQKP |
NCBI Accession
|
YP_001974394.1
|
Location
|
298-1071 |
Gene Name
|
AV1 |
Protein Name
|
capsid protein |
Coding Region
|
ATGTCGAAGCGACCCGCCGATATAGTCATTTCCACACCCGCTTCCAAGGTGCGTCGGCGTCTGAACTTCGACAGCCCATACACCAGCCGTGCTGTTGCCCCCACTGTCCTCGTCACAAAGAAAAGGAGATTATGGGCCAATCGGCCCATGTACCGGAAGCCCAGACTGTACAGAATGTACAGAAGCCCTGATGTTCCTAGGGGCTGTGAAGGCCCATGTAAGGTCCAGTCGTTTGAACAGAGGCATGACATAGCCCATACTGGGAAGGTTTTGTGTATTTCTGATGTTACTAGGGGTAATGGTATTACCCATAGGGTAGGAAAGAGGTTTTGTATTAAGTCTGTTTATATTTTAGGCAAAGTGTGGATGGATGAGAATATTAAGACCAAGAACCACACGAATAGTGTTATGTTTTTTATTGTTAGGGATAGACGTCCGTTTGGTACTCCAATGGATTTTGGACAGGTTTTTAATATGTATGACAATGAGCCCAGTACTGCTACTATCAAGAACGATCTCAGGGATCGTTATCAGGTGCTGCATCCGTTTGTGTATACGGTTACCGGTGGTCAGTATGCGTCCAAGGAACAGGCATTGGTCAGGAAGTTCTACAGGATTTACCAGCGTGTTACATACAACCATCAGGAAGATGCTAAATATGAGAACCACACTGAAAATGCTTTGTTGTTGTATATGGCATGTACTCATGCCTCAAATCCTGTGTATGCTACTTTGAAGATTCGAATCTATTTTTACGATTCGACTCAGAATTAA |
Protein Sequence
|
MSKRPADIVISTPASKVRRRLNFDSPYTSRAVAPTVLVTKKRRLWANRPMYRKPRLYRMYRSPDVPRGCEGPCKVQSFEQRHDIAHTGKVLCISDVTRGNGITHRVGKRFCIKSVYILGKVWMDENIKTKNHTNSVMFFIVRDRRPFGTPMDFGQVFNMYDNEPSTATIKNDLRDRYQVLHPFVYTVTGGQYASKEQALVRKFYRIYQRVTYNHQEDAKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSTQN |
NCBI Accession
|
YP_001974395.1
|
Location
|
1068-1472 |
Gene Name
|
AC3 |
Protein Name
|
AC3 protein |
Coding Region
|
ATGGATTCACGCACCGGGGAGAGCATCACTGCGGCTCAAGCAAGGAATGGCGCATATATCTGGACGGTGCCAAATCCCCTCTATTTCAAGATCATGGAACACACCAAGAGGACGTTCTTCAGGAACCACGACATCATCCATGTCCAAGTCAGATTCAACCACAACCTCAGGAAGCAACTGGGGATTCACAAGTGCTTCCTGAACTTGAAGATCTACACAGCCTTACGTCCTCAGACCTGGCGTTTCTTAAGGGTTTTTAGAACCCATGTACTGAAGTACTTAGATAGTCTAGGTGTAATTAGTATCAACAATTGTATTAGGGCTTTCAATTATGTACTCAACGATGTAATAGAACAGACAATTGATGTAATTGAAGATCATGAAATAAAATTTAATGTTTATTAA |
Protein Sequence
|
MDSRTGESITAAQARNGAYIWTVPNPLYFKIMEHTKRTFFRNHDIIHVQVRFNHNLRKQLGIHKCFLNLKIYTALRPQTWRFLRVFRTHVLKYLDSLGVISINNCIRAFNYVLNDVIEQTIDVIEDHEIKFNVY |
NCBI Accession
|
YP_001974396.1
|
Location
|
1213-1614 |
Gene Name
|
AC2 |
Protein Name
|
AC2 protein |
Coding Region
|
ATGCAACATTCATCACCCTCGAGGAGCCACTCTATTCCGGTCAAGGTGCAACACCGAATAGCCAAGCACAGACCGATTAGAAGACGAAGACTCGATCTTCCTTGCGGCTGCAGCATATACAAGGCAATAAACCGTGCGGACCATGGATTCACGCACCGGGGAGAGCATCACTGCGGCTCAAGCAAGGAATGGCGCATATATCTGGACGGTGCCAAATCCCCTCTATTTCAAGATCATGGAACACACCAAGAGGACGTTCTTCAGGAACCACGACATCATCCATGTCCAAGTCAGATTCAACCACAACCTCAGGAAGCAACTGGGGATTCACAAGTGCTTCCTGAACTTGAAGATCTACACAGCCTTACGTCCTCAGACCTGGCGTTTCTTAAGGGTTTTTAG |
Protein Sequence
|
MQHSSPSRSHSIPVKVQHRIAKHRPIRRRRLDLPCGCSIYKAINRADHGFTHRGEHHCGSSKEWRIYLDGAKSPLFQDHGTHQEDVLQEPRHHPCPSQIQPQPQEATGDSQVLPELEDLHSLTSSDLAFLKGF |
NCBI Accession
|
YP_001974397.1
|
Location
|
1535-2602 |
Gene Name
|
AC1 |
Protein Name
|
AC1 protein |
Coding Region
|
ATGCCTCGTGCCGGCCGTTTCTCTATTAAAGCCAAAAATTATTTCTTAACATACCCACAGTGCTCTCTCACCAAAGAGGAAGCACTTTCCCAATTACAGAACCTGCAAACCCCTACCAATAAAAAATTCATAAAAATTTGCAGAGAATTGCACGAGGATGGGAGCCCTCATCTCCACGTGCTCGTGCAGTTCGAAGGCAAATTCAACTGCACGAATCAGAGATTCTTCGACCTGGTATCCCCAACCCGGTCAACACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGATGTCAAGTCCTACATCGACAAGGATGGAGACACCATTGAATGGGGTCAGTTCCAGGTCGACGGAAGAAGTGCTAGGGGAGGCTGCCAGAATGCTAATGACGCATGTGCAGAGGCGTTAAATGCAGGTTCAAAAGAAGCTGCATTAGCAATAATAAGGGAGAAACTCCCAAAAGATTATATTTTTCAGTTTCATAATTTAAATTCAAATTTAGATAGGATTTTTACACCTCCATTGGAGGTTTATGTTTCTCCTTTTCTTTCTTCTTCTTTTAATCAAGTTCCCGAGGAACTTGGGGTCTGGGTCTCTGAGAATGTGAAGAGTGCCGCTGCGCGGCCTTGGAGACCGATTAGTATTGTAATAGAGGGCGATAGTCGTACCGGCAAGACCATGTGGGCTAGGTCGTTAGGTCCACACAATTATTTGTGTGGTCACCTGGACTTAAGCCCTAAGGTTTATTCAAATGACGCGTGGTACAACGTCATTGATGATGTCGACCCCCACTACCTAAAGCACTTTAAAGAATTCATGGGGGCCCAAAGGGACTGGCAAAGCAACACGAAGTACGGGAAACCAATTCAAATTAAAGGTGGGATCCCTACAATCTTCCTCTGCAATCCAGGACCGACATCATCATATAAAGAGTACTTGGACGAGGACAAAAATGCTGCATTAAAGGCGTGGGCACTAAAAAATGCAACATTCATCACCCTCGAGGAGCCACTCTATTCCGGTCAAGGTGCAACACCGAATAGCCAAGCACAGACCGATTAG |
Protein Sequence
|
MPRAGRFSIKAKNYFLTYPQCSLTKEEALSQLQNLQTPTNKKFIKICRELHEDGSPHLHVLVQFEGKFNCTNQRFFDLVSPTRSTHFHPNIQGAKSSSDVKSYIDKDGDTIEWGQFQVDGRSARGGCQNANDACAEALNAGSKEAALAIIREKLPKDYIFQFHNLNSNLDRIFTPPLEVYVSPFLSSSFNQVPEELGVWVSENVKSAAARPWRPISIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEDKNAALKAWALKNATFITLEEPLYSGQGATPNSQAQTD |
NCBI Accession
|
YP_001974398.1
|
Location
|
2188-2445 |
Gene Name
|
AC4 |
Protein Name
|
AC4 protein |
Coding Region
|
ATGGGAGCCCTCATCTCCACGTGCTCGTGCAGTTCGAAGGCAAATTCAACTGCACGAATCAGAGATTCTTCGACCTGGTATCCCCAACCCGGTCAACACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGATGTCAAGTCCTACATCGACAAGGATGGAGACACCATTGAATGGGGTCAGTTCCAGGTCGACGGAAGAAGTGCTAGGGGAGGCTGCCAGAATGCTAATGACGCATGTGCAGAGGCGTTAA |
Protein Sequence
|
MGALISTCSCSSKANSTARIRDSSTWYPQPGQHISIQTFRELNPAPMSSPTSTRMETPLNGVSSRSTEEVLGEAARMLMTHVQRR |