Malvastrum leaf curl Philippines virus
Basic Information
Genus |
Begomovirus
|
NCBI Assembly |
GCF_000909895.1 |
Isolate |
Philippines |
Release date |
2015/2/22 |
Submitter |
She,X.M., He,Z.F. |
Host |
|
Vector |
|
Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGATGGCCCGCGAATTTTTTTTTTGGGCCCCGCCACTAAGTTTTGTCTGCCAATTGAAACGCTCCCTCAAAGCTTAATTATTTTTTTTGTCTTTATATAACTTGGTCGCTAAGTTGTATATGCATTAAAATGTGGGATCCACTTCTAAATGAGTTCCCTGAAACTGTACACGGTCTTAGGTGTATGCTTGCCGTAAAATATTGTCAGTTAATCGAACAGACATACTCTCCAGATACGGTTGGTTACGATCTTATACGAGATTTAATTTCAGTAATTCGTGCTCGCAATTATGTCGAAGCGTCCCGCCGATATAGTCATTTCCACTCCCGCCTCGAAGGTACGTCGCCGTCTGAACTTCGACACCCCCGTGATGAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACCAACAAAAGAAGGACATGGACCAACAGGCCCATGTATCGCAAGCCCAGAATGTACAGAATGTACAGAAGCCCTGATGTACCCAAAGGTTGTGAAGGCCCATGTAAGGTCCAATCTTATGAACAGAGGCACGACATATCCCATGTTGGTAAAGTATTATGTGTTAGTGATGTCACCCGTGGTAGTGGGCTTACCCATCGCGTTGGTAAGAGATTTTGTGTGAAGTCCGTTTATGTATTGGGTAAAATATGGATGGATGAAAATATCAAAACCAAGAACCATACGAACACTGTGATGTTTTATCTTGTTCGTGATAGAAGGCCCTTTGGTACTGCTATGGATTTTGGTCAGGTGTTTAACATGTATGATAATGAGCCTAGTACTGCTACTATCAAGAATGATCTTCGAGATCGTTATCAAGTTTTAAGGAAATTCACTTCAACAGTCACAGGTGGTCAATATGCTTCTAAGGAACAGGCGTTGGTTAGGAAATTTATGAAGATTAATAATTATGTAGTTTATAATCATCAAGAAGCTGCTAAGTATGACAATCATACTGAGAATGCTTTGTTATTGTATATGGCTTGTACTCATGCCAGTAATCCAGTGTATGCTACTTTGAAGATCAGAATCTATTTTTATGATTCTGTTCAAAATTAATAAATATTGAATTTTATTATATCAGAAACTTGTACATCGATTGTTTTTTCAAATACATCGTACAGTACATGATCGACTGCCCTAATTACATTGTTAATGCTAATAACACCTAACCTATCTAAATATTTCATACATTGATATTTAAATACTCTTAAGAAACGCCCAGTCTGAGGATGTAAATGAGTCCAGATTTTGCAGATCAGAAAACACCGGTGTATCCCCAACGCTTTCCTCAGGTTGTAGTTGAACTGTATTTGGACTGTTATGATGTCGTGGTTTATTAGGAACGGTCTCTCGAGGTGTTGGGTTATCTTGAAATAGAGGGGATTTTTGATTGTCCAGGTATAAACGCCATTCTCTGCTTGAGCTGCAGTGATGAGTTCCCCTGTGCGAGAATCCATGTGATGCGCAATTAATCCCAAAATAGTAAGAGCAACCGCAGGGAAGATCAACTCGACGCCTGCGAATTGGTCTCCTCTTCGCTATTCTGTGCTGGACTTTGATGGGCACCTGAGTACAATGGTTGTGTGATGGTGATGAATTCAGCATTCTTTAATGCCCAGTCTTTGAGTGCTGAATTCTTTTCCTCGTCCAAGTATTCTTTATACGATGATGTTGGTCCTGGATTGCAGAGGAAGATTGTTGGGATCCCACCTTTAATTTGAATTGGTTTCCCGTACTTTGTGTTGCTTTGCCAGTCCCTCTGTGCCCCCATGAACTCTTTAAAGTGCTTTAGGAAGTGGGGGTCTACGTCATCAATGACGTTGTACCAGGCATCATTACTGTATACTTTTGGACTGAGGTCAAGATGACCACACAAATAATTATGTGGGCCTAACGATCTAGCCCACATTGTCTTCCCTGTACGACTATCACCCTCTACTACAATACTTACAGGCCTCCACGGCCGCGCAGCGGCATCCCTGACATTCTCGGAAACCCATTCTTCAAGTTCTTCTGGAACTTGATCAAAAGAAGAAGAAGAAAAAGGACAAACAAAAACCTCCAACGGAGGTGCAAAAATCCTATCTAAATTGGAATTTAAATTATGAAACTGTAAAACATAATCTTTAGGGGCTAATTCCCTAATTACATTAAGAGCCTCTGACTTACTTCCGCTGTTAAGCGCTTTGGCGTAAGCATCATTGGCTGATTGTTGCCCTCCTCTAGCACTTCTTCCATCGATCTGGAACTCTCCCCATTCCAGTGTGTCTCCGTCCTTGTTGATATAGGACTTGACGTCGGAGCTGGATTTAGCTCCCTGAATGTTTGGATGGAAATGTGCTGACCTGGTTTGGGATACCAGGTCGAAGAATCTGTTATTCTTGCACTGGAACTTGCCCTCGAACTGGATGAGCACGTGGAGATGAGGGTTCCCATTTTGGTGAAACTCTCTACAGATCTTGATATATTTTTTATTTGTTGGTGTAGTTAGGTTTTGTAGTTGGGAAAGTGCTTCGTCTTTAGTAAGAGAGCAATCTGGATAAGTGAGGAAAAAATTTTTGGCATTTATTCGAAATGAATTATTACGTGGCATATTGGCAATCGGTGTCTCTCAGAGTATTATGGCAATCGGTGTCTGGGGTCTTATTTATACCTAGACACCAAATGGCATTGTCGTAATTATCAATCAAACTTCAAATTTGAAACGCAAAAGCGGCCATCCGTTTAATATT
Gene Information
NCBI Accession
|
YP_008003511.1
|
Location
|
133-483 |
Gene Name
|
AV2 |
Protein Name
|
pre-coat protein |
Coding Region
|
ATGTGGGATCCACTTCTAAATGAGTTCCCTGAAACTGTACACGGTCTTAGGTGTATGCTTGCCGTAAAATATTGTCAGTTAATCGAACAGACATACTCTCCAGATACGGTTGGTTACGATCTTATACGAGATTTAATTTCAGTAATTCGTGCTCGCAATTATGTCGAAGCGTCCCGCCGATATAGTCATTTCCACTCCCGCCTCGAAGGTACGTCGCCGTCTGAACTTCGACACCCCCGTGATGAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACCAACAAAAGAAGGACATGGACCAACAGGCCCATGTATCGCAAGCCCAGAATGTACAGAATGTACAGAAGCCCTGA |
Protein Sequence
|
MWDPLLNEFPETVHGLRCMLAVKYCQLIEQTYSPDTVGYDLIRDLISVIRARNYVEASRRYSHFHSRLEGTSPSELRHPRDEPCCCPHCPRHQQKKDMDQQAHVSQAQNVQNVQKP |
NCBI Accession
|
YP_008003512.1
|
Location
|
254-550 |
Gene Name
|
AC5 |
Protein Name
|
C5 protein |
Coding Region
|
ATGGGATATGTCGTGCCTCTGTTCATAAGATTGGACCTTACATGGGCCTTCACAACCTTTGGGTACATCAGGGCTTCTGTACATTCTGTACATTCTGGGCTTGCGATACATGGGCCTGTTGGTCCATGTCCTTCTTTTGTTGGTGACGAGGACAGTGGGGGCAGCAGCACGGCTCATCACGGGGGTGTCGAAGTTCAGACGGCGACGTACCTTCGAGGCGGGAGTGGAAATGACTATATCGGCGGGACGCTTCGACATAATTGCGAGCACGAATTACTGAAATTAAATCTCGTATAA |
Protein Sequence
|
MGYVVPLFIRLDLTWAFTTFGYIRASVHSVHSGLAIHGPVGPCPSFVGDEDSGGSSTAHHGGVEVQTATYLRGGSGNDYIGGTLRHNCEHELLKLNLV |
NCBI Accession
|
YP_008003513.1
|
Location
|
293-1066 |
Gene Name
|
AV1 |
Protein Name
|
coat protein |
Coding Region
|
ATGTCGAAGCGTCCCGCCGATATAGTCATTTCCACTCCCGCCTCGAAGGTACGTCGCCGTCTGAACTTCGACACCCCCGTGATGAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACCAACAAAAGAAGGACATGGACCAACAGGCCCATGTATCGCAAGCCCAGAATGTACAGAATGTACAGAAGCCCTGATGTACCCAAAGGTTGTGAAGGCCCATGTAAGGTCCAATCTTATGAACAGAGGCACGACATATCCCATGTTGGTAAAGTATTATGTGTTAGTGATGTCACCCGTGGTAGTGGGCTTACCCATCGCGTTGGTAAGAGATTTTGTGTGAAGTCCGTTTATGTATTGGGTAAAATATGGATGGATGAAAATATCAAAACCAAGAACCATACGAACACTGTGATGTTTTATCTTGTTCGTGATAGAAGGCCCTTTGGTACTGCTATGGATTTTGGTCAGGTGTTTAACATGTATGATAATGAGCCTAGTACTGCTACTATCAAGAATGATCTTCGAGATCGTTATCAAGTTTTAAGGAAATTCACTTCAACAGTCACAGGTGGTCAATATGCTTCTAAGGAACAGGCGTTGGTTAGGAAATTTATGAAGATTAATAATTATGTAGTTTATAATCATCAAGAAGCTGCTAAGTATGACAATCATACTGAGAATGCTTTGTTATTGTATATGGCTTGTACTCATGCCAGTAATCCAGTGTATGCTACTTTGAAGATCAGAATCTATTTTTATGATTCTGTTCAAAATTAA |
Protein Sequence
|
MSKRPADIVISTPASKVRRRLNFDTPVMSRAAAPTVLVTNKRRTWTNRPMYRKPRMYRMYRSPDVPKGCEGPCKVQSYEQRHDISHVGKVLCVSDVTRGSGLTHRVGKRFCVKSVYVLGKIWMDENIKTKNHTNTVMFYLVRDRRPFGTAMDFGQVFNMYDNEPSTATIKNDLRDRYQVLRKFTSTVTGGQYASKEQALVRKFMKINNYVVYNHQEAAKYDNHTENALLLYMACTHASNPVYATLKIRIYFYDSVQN |
NCBI Accession
|
YP_008003514.1
|
Location
|
1063-1467 |
Gene Name
|
AC3 |
Protein Name
|
C3 protein |
Coding Region
|
ATGGATTCTCGCACAGGGGAACTCATCACTGCAGCTCAAGCAGAGAATGGCGTTTATACCTGGACAATCAAAAATCCCCTCTATTTCAAGATAACCCAACACCTCGAGAGACCGTTCCTAATAAACCACGACATCATAACAGTCCAAATACAGTTCAACTACAACCTGAGGAAAGCGTTGGGGATACACCGGTGTTTTCTGATCTGCAAAATCTGGACTCATTTACATCCTCAGACTGGGCGTTTCTTAAGAGTATTTAAATATCAATGTATGAAATATTTAGATAGGTTAGGTGTTATTAGCATTAACAATGTAATTAGGGCAGTCGATCATGTACTGTACGATGTATTTGAAAAAACAATCGATGTACAAGTTTCTGATATAATAAAATTCAATATTTATTAA |
Protein Sequence
|
MDSRTGELITAAQAENGVYTWTIKNPLYFKITQHLERPFLINHDIITVQIQFNYNLRKALGIHRCFLICKIWTHLHPQTGRFLRVFKYQCMKYLDRLGVISINNVIRAVDHVLYDVFEKTIDVQVSDIIKFNIY |
NCBI Accession
|
YP_008003515.1
|
Location
|
1208-1615 |
Gene Name
|
AC2 |
Protein Name
|
C2 protein |
Coding Region
|
ATGCTGAATTCATCACCATCACACAACCATTGTACTCAGGTGCCCATCAAAGTCCAGCACAGAATAGCGAAGAGGAGACCAATTCGCAGGCGTCGAGTTGATCTTCCCTGCGGTTGCTCTTACTATTTTGGGATTAATTGCGCATCACATGGATTCTCGCACAGGGGAACTCATCACTGCAGCTCAAGCAGAGAATGGCGTTTATACCTGGACAATCAAAAATCCCCTCTATTTCAAGATAACCCAACACCTCGAGAGACCGTTCCTAATAAACCACGACATCATAACAGTCCAAATACAGTTCAACTACAACCTGAGGAAAGCGTTGGGGATACACCGGTGTTTTCTGATCTGCAAAATCTGGACTCATTTACATCCTCAGACTGGGCGTTTCTTAAGAGTATTTAA |
Protein Sequence
|
MLNSSPSHNHCTQVPIKVQHRIAKRRPIRRRRVDLPCGCSYYFGINCASHGFSHRGTHHCSSSREWRLYLDNQKSPLFQDNPTPRETVPNKPRHHNSPNTVQLQPEESVGDTPVFSDLQNLDSFTSSDWAFLKSI |
NCBI Accession
|
YP_008003516.1
|
Location
|
1515-2603 |
Gene Name
|
AC1 |
Protein Name
|
C1 protein |
Coding Region
|
ATGCCACGTAATAATTCATTTCGAATAAATGCCAAAAATTTTTTCCTCACTTATCCAGATTGCTCTCTTACTAAAGACGAAGCACTTTCCCAACTACAAAACCTAACTACACCAACAAATAAAAAATATATCAAGATCTGTAGAGAGTTTCACCAAAATGGGAACCCTCATCTCCACGTGCTCATCCAGTTCGAGGGCAAGTTCCAGTGCAAGAATAACAGATTCTTCGACCTGGTATCCCAAACCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTATATCAACAAGGACGGAGACACACTGGAATGGGGAGAGTTCCAGATCGATGGAAGAAGTGCTAGAGGAGGGCAACAATCAGCCAATGATGCTTACGCCAAAGCGCTTAACAGCGGAAGTAAGTCAGAGGCTCTTAATGTAATTAGGGAATTAGCCCCTAAAGATTATGTTTTACAGTTTCATAATTTAAATTCCAATTTAGATAGGATTTTTGCACCTCCGTTGGAGGTTTTTGTTTGTCCTTTTTCTTCTTCTTCTTTTGATCAAGTTCCAGAAGAACTTGAAGAATGGGTTTCCGAGAATGTCAGGGATGCCGCTGCGCGGCCGTGGAGGCCTGTAAGTATTGTAGTAGAGGGTGATAGTCGTACAGGGAAGACAATGTGGGCTAGATCGTTAGGCCCACATAATTATTTGTGTGGTCATCTTGACCTCAGTCCAAAAGTATACAGTAATGATGCCTGGTACAACGTCATTGATGACGTAGACCCCCACTTCCTAAAGCACTTTAAAGAGTTCATGGGGGCACAGAGGGACTGGCAAAGCAACACAAAGTACGGGAAACCAATTCAAATTAAAGGTGGGATCCCAACAATCTTCCTCTGCAATCCAGGACCAACATCATCGTATAAAGAATACTTGGACGAGGAAAAGAATTCAGCACTCAAAGACTGGGCATTAAAGAATGCTGAATTCATCACCATCACACAACCATTGTACTCAGGTGCCCATCAAAGTCCAGCACAGAATAGCGAAGAGGAGACCAATTCGCAGGCGTCGAGTTGA |
Protein Sequence
|
MPRNNSFRINAKNFFLTYPDCSLTKDEALSQLQNLTTPTNKKYIKICREFHQNGNPHLHVLIQFEGKFQCKNNRFFDLVSQTRSAHFHPNIQGAKSSSDVKSYINKDGDTLEWGEFQIDGRSARGGQQSANDAYAKALNSGSKSEALNVIRELAPKDYVLQFHNLNSNLDRIFAPPLEVFVCPFSSSSFDQVPEELEEWVSENVRDAAARPWRPVSIVVEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNSALKDWALKNAEFITITQPLYSGAHQSPAQNSEEETNSQASS |
NCBI Accession
|
YP_008003517.1
|
Location
|
2156-2446 |
Gene Name
|
AC4 |
Protein Name
|
C4 protein |
Coding Region
|
ATGGGAACCCTCATCTCCACGTGCTCATCCAGTTCGAGGGCAAGTTCCAGTGCAAGAATAACAGATTCTTCGACCTGGTATCCCAAACCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTATATCAACAAGGACGGAGACACACTGGAATGGGGAGAGTTCCAGATCGATGGAAGAAGTGCTAGAGGAGGGCAACAATCAGCCAATGATGCTTACGCCAAAGCGCTTAACAGCGGAAGTAAGTCAGAGGCTCTTAATGTAA |
Protein Sequence
|
MGTLISTCSSSSRASSSARITDSSTWYPKPGQHISIQTFRELNPAPTSSPISTRTETHWNGESSRSMEEVLEEGNNQPMMLTPKRLTAEVSQRLLM |