Malvastrum leaf curl Philippines virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_000909895.1
Isolate Philippines
Release date 2015/2/22
Submitter She,X.M., He,Z.F.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_021245
ACCGGATGGCCCGCGAATTTTTTTTTTGGGCCCCGCCACTAAGTTTTGTCTGCCAATTGAAACGCTCCCTCAAAGCTTAATTATTTTTTTTGTCTTTATATAACTTGGTCGCTAAGTTGTATATGCATTAAAATGTGGGATCCACTTCTAAATGAGTTCCCTGAAACTGTACACGGTCTTAGGTGTATGCTTGCCGTAAAATATTGTCAGTTAATCGAACAGACATACTCTCCAGATACGGTTGGTTACGATCTTATACGAGATTTAATTTCAGTAATTCGTGCTCGCAATTATGTCGAAGCGTCCCGCCGATATAGTCATTTCCACTCCCGCCTCGAAGGTACGTCGCCGTCTGAACTTCGACACCCCCGTGATGAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACCAACAAAAGAAGGACATGGACCAACAGGCCCATGTATCGCAAGCCCAGAATGTACAGAATGTACAGAAGCCCTGATGTACCCAAAGGTTGTGAAGGCCCATGTAAGGTCCAATCTTATGAACAGAGGCACGACATATCCCATGTTGGTAAAGTATTATGTGTTAGTGATGTCACCCGTGGTAGTGGGCTTACCCATCGCGTTGGTAAGAGATTTTGTGTGAAGTCCGTTTATGTATTGGGTAAAATATGGATGGATGAAAATATCAAAACCAAGAACCATACGAACACTGTGATGTTTTATCTTGTTCGTGATAGAAGGCCCTTTGGTACTGCTATGGATTTTGGTCAGGTGTTTAACATGTATGATAATGAGCCTAGTACTGCTACTATCAAGAATGATCTTCGAGATCGTTATCAAGTTTTAAGGAAATTCACTTCAACAGTCACAGGTGGTCAATATGCTTCTAAGGAACAGGCGTTGGTTAGGAAATTTATGAAGATTAATAATTATGTAGTTTATAATCATCAAGAAGCTGCTAAGTATGACAATCATACTGAGAATGCTTTGTTATTGTATATGGCTTGTACTCATGCCAGTAATCCAGTGTATGCTACTTTGAAGATCAGAATCTATTTTTATGATTCTGTTCAAAATTAATAAATATTGAATTTTATTATATCAGAAACTTGTACATCGATTGTTTTTTCAAATACATCGTACAGTACATGATCGACTGCCCTAATTACATTGTTAATGCTAATAACACCTAACCTATCTAAATATTTCATACATTGATATTTAAATACTCTTAAGAAACGCCCAGTCTGAGGATGTAAATGAGTCCAGATTTTGCAGATCAGAAAACACCGGTGTATCCCCAACGCTTTCCTCAGGTTGTAGTTGAACTGTATTTGGACTGTTATGATGTCGTGGTTTATTAGGAACGGTCTCTCGAGGTGTTGGGTTATCTTGAAATAGAGGGGATTTTTGATTGTCCAGGTATAAACGCCATTCTCTGCTTGAGCTGCAGTGATGAGTTCCCCTGTGCGAGAATCCATGTGATGCGCAATTAATCCCAAAATAGTAAGAGCAACCGCAGGGAAGATCAACTCGACGCCTGCGAATTGGTCTCCTCTTCGCTATTCTGTGCTGGACTTTGATGGGCACCTGAGTACAATGGTTGTGTGATGGTGATGAATTCAGCATTCTTTAATGCCCAGTCTTTGAGTGCTGAATTCTTTTCCTCGTCCAAGTATTCTTTATACGATGATGTTGGTCCTGGATTGCAGAGGAAGATTGTTGGGATCCCACCTTTAATTTGAATTGGTTTCCCGTACTTTGTGTTGCTTTGCCAGTCCCTCTGTGCCCCCATGAACTCTTTAAAGTGCTTTAGGAAGTGGGGGTCTACGTCATCAATGACGTTGTACCAGGCATCATTACTGTATACTTTTGGACTGAGGTCAAGATGACCACACAAATAATTATGTGGGCCTAACGATCTAGCCCACATTGTCTTCCCTGTACGACTATCACCCTCTACTACAATACTTACAGGCCTCCACGGCCGCGCAGCGGCATCCCTGACATTCTCGGAAACCCATTCTTCAAGTTCTTCTGGAACTTGATCAAAAGAAGAAGAAGAAAAAGGACAAACAAAAACCTCCAACGGAGGTGCAAAAATCCTATCTAAATTGGAATTTAAATTATGAAACTGTAAAACATAATCTTTAGGGGCTAATTCCCTAATTACATTAAGAGCCTCTGACTTACTTCCGCTGTTAAGCGCTTTGGCGTAAGCATCATTGGCTGATTGTTGCCCTCCTCTAGCACTTCTTCCATCGATCTGGAACTCTCCCCATTCCAGTGTGTCTCCGTCCTTGTTGATATAGGACTTGACGTCGGAGCTGGATTTAGCTCCCTGAATGTTTGGATGGAAATGTGCTGACCTGGTTTGGGATACCAGGTCGAAGAATCTGTTATTCTTGCACTGGAACTTGCCCTCGAACTGGATGAGCACGTGGAGATGAGGGTTCCCATTTTGGTGAAACTCTCTACAGATCTTGATATATTTTTTATTTGTTGGTGTAGTTAGGTTTTGTAGTTGGGAAAGTGCTTCGTCTTTAGTAAGAGAGCAATCTGGATAAGTGAGGAAAAAATTTTTGGCATTTATTCGAAATGAATTATTACGTGGCATATTGGCAATCGGTGTCTCTCAGAGTATTATGGCAATCGGTGTCTGGGGTCTTATTTATACCTAGACACCAAATGGCATTGTCGTAATTATCAATCAAACTTCAAATTTGAAACGCAAAAGCGGCCATCCGTTTAATATT

Gene Information

NCBI Accession YP_008003511.1
Location 133-483
Gene Name AV2
Protein Name pre-coat protein
Coding Region ATGTGGGATCCACTTCTAAATGAGTTCCCTGAAACTGTACACGGTCTTAGGTGTATGCTTGCCGTAAAATATTGTCAGTTAATCGAACAGACATACTCTCCAGATACGGTTGGTTACGATCTTATACGAGATTTAATTTCAGTAATTCGTGCTCGCAATTATGTCGAAGCGTCCCGCCGATATAGTCATTTCCACTCCCGCCTCGAAGGTACGTCGCCGTCTGAACTTCGACACCCCCGTGATGAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACCAACAAAAGAAGGACATGGACCAACAGGCCCATGTATCGCAAGCCCAGAATGTACAGAATGTACAGAAGCCCTGA
Protein Sequence MWDPLLNEFPETVHGLRCMLAVKYCQLIEQTYSPDTVGYDLIRDLISVIRARNYVEASRRYSHFHSRLEGTSPSELRHPRDEPCCCPHCPRHQQKKDMDQQAHVSQAQNVQNVQKP

NCBI Accession YP_008003512.1
Location 254-550
Gene Name AC5
Protein Name C5 protein
Coding Region ATGGGATATGTCGTGCCTCTGTTCATAAGATTGGACCTTACATGGGCCTTCACAACCTTTGGGTACATCAGGGCTTCTGTACATTCTGTACATTCTGGGCTTGCGATACATGGGCCTGTTGGTCCATGTCCTTCTTTTGTTGGTGACGAGGACAGTGGGGGCAGCAGCACGGCTCATCACGGGGGTGTCGAAGTTCAGACGGCGACGTACCTTCGAGGCGGGAGTGGAAATGACTATATCGGCGGGACGCTTCGACATAATTGCGAGCACGAATTACTGAAATTAAATCTCGTATAA
Protein Sequence MGYVVPLFIRLDLTWAFTTFGYIRASVHSVHSGLAIHGPVGPCPSFVGDEDSGGSSTAHHGGVEVQTATYLRGGSGNDYIGGTLRHNCEHELLKLNLV

NCBI Accession YP_008003513.1
Location 293-1066
Gene Name AV1
Protein Name coat protein
Coding Region ATGTCGAAGCGTCCCGCCGATATAGTCATTTCCACTCCCGCCTCGAAGGTACGTCGCCGTCTGAACTTCGACACCCCCGTGATGAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACCAACAAAAGAAGGACATGGACCAACAGGCCCATGTATCGCAAGCCCAGAATGTACAGAATGTACAGAAGCCCTGATGTACCCAAAGGTTGTGAAGGCCCATGTAAGGTCCAATCTTATGAACAGAGGCACGACATATCCCATGTTGGTAAAGTATTATGTGTTAGTGATGTCACCCGTGGTAGTGGGCTTACCCATCGCGTTGGTAAGAGATTTTGTGTGAAGTCCGTTTATGTATTGGGTAAAATATGGATGGATGAAAATATCAAAACCAAGAACCATACGAACACTGTGATGTTTTATCTTGTTCGTGATAGAAGGCCCTTTGGTACTGCTATGGATTTTGGTCAGGTGTTTAACATGTATGATAATGAGCCTAGTACTGCTACTATCAAGAATGATCTTCGAGATCGTTATCAAGTTTTAAGGAAATTCACTTCAACAGTCACAGGTGGTCAATATGCTTCTAAGGAACAGGCGTTGGTTAGGAAATTTATGAAGATTAATAATTATGTAGTTTATAATCATCAAGAAGCTGCTAAGTATGACAATCATACTGAGAATGCTTTGTTATTGTATATGGCTTGTACTCATGCCAGTAATCCAGTGTATGCTACTTTGAAGATCAGAATCTATTTTTATGATTCTGTTCAAAATTAA
Protein Sequence MSKRPADIVISTPASKVRRRLNFDTPVMSRAAAPTVLVTNKRRTWTNRPMYRKPRMYRMYRSPDVPKGCEGPCKVQSYEQRHDISHVGKVLCVSDVTRGSGLTHRVGKRFCVKSVYVLGKIWMDENIKTKNHTNTVMFYLVRDRRPFGTAMDFGQVFNMYDNEPSTATIKNDLRDRYQVLRKFTSTVTGGQYASKEQALVRKFMKINNYVVYNHQEAAKYDNHTENALLLYMACTHASNPVYATLKIRIYFYDSVQN

NCBI Accession YP_008003514.1
Location 1063-1467
Gene Name AC3
Protein Name C3 protein
Coding Region ATGGATTCTCGCACAGGGGAACTCATCACTGCAGCTCAAGCAGAGAATGGCGTTTATACCTGGACAATCAAAAATCCCCTCTATTTCAAGATAACCCAACACCTCGAGAGACCGTTCCTAATAAACCACGACATCATAACAGTCCAAATACAGTTCAACTACAACCTGAGGAAAGCGTTGGGGATACACCGGTGTTTTCTGATCTGCAAAATCTGGACTCATTTACATCCTCAGACTGGGCGTTTCTTAAGAGTATTTAAATATCAATGTATGAAATATTTAGATAGGTTAGGTGTTATTAGCATTAACAATGTAATTAGGGCAGTCGATCATGTACTGTACGATGTATTTGAAAAAACAATCGATGTACAAGTTTCTGATATAATAAAATTCAATATTTATTAA
Protein Sequence MDSRTGELITAAQAENGVYTWTIKNPLYFKITQHLERPFLINHDIITVQIQFNYNLRKALGIHRCFLICKIWTHLHPQTGRFLRVFKYQCMKYLDRLGVISINNVIRAVDHVLYDVFEKTIDVQVSDIIKFNIY

NCBI Accession YP_008003515.1
Location 1208-1615
Gene Name AC2
Protein Name C2 protein
Coding Region ATGCTGAATTCATCACCATCACACAACCATTGTACTCAGGTGCCCATCAAAGTCCAGCACAGAATAGCGAAGAGGAGACCAATTCGCAGGCGTCGAGTTGATCTTCCCTGCGGTTGCTCTTACTATTTTGGGATTAATTGCGCATCACATGGATTCTCGCACAGGGGAACTCATCACTGCAGCTCAAGCAGAGAATGGCGTTTATACCTGGACAATCAAAAATCCCCTCTATTTCAAGATAACCCAACACCTCGAGAGACCGTTCCTAATAAACCACGACATCATAACAGTCCAAATACAGTTCAACTACAACCTGAGGAAAGCGTTGGGGATACACCGGTGTTTTCTGATCTGCAAAATCTGGACTCATTTACATCCTCAGACTGGGCGTTTCTTAAGAGTATTTAA
Protein Sequence MLNSSPSHNHCTQVPIKVQHRIAKRRPIRRRRVDLPCGCSYYFGINCASHGFSHRGTHHCSSSREWRLYLDNQKSPLFQDNPTPRETVPNKPRHHNSPNTVQLQPEESVGDTPVFSDLQNLDSFTSSDWAFLKSI

NCBI Accession YP_008003516.1
Location 1515-2603
Gene Name AC1
Protein Name C1 protein
Coding Region ATGCCACGTAATAATTCATTTCGAATAAATGCCAAAAATTTTTTCCTCACTTATCCAGATTGCTCTCTTACTAAAGACGAAGCACTTTCCCAACTACAAAACCTAACTACACCAACAAATAAAAAATATATCAAGATCTGTAGAGAGTTTCACCAAAATGGGAACCCTCATCTCCACGTGCTCATCCAGTTCGAGGGCAAGTTCCAGTGCAAGAATAACAGATTCTTCGACCTGGTATCCCAAACCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTATATCAACAAGGACGGAGACACACTGGAATGGGGAGAGTTCCAGATCGATGGAAGAAGTGCTAGAGGAGGGCAACAATCAGCCAATGATGCTTACGCCAAAGCGCTTAACAGCGGAAGTAAGTCAGAGGCTCTTAATGTAATTAGGGAATTAGCCCCTAAAGATTATGTTTTACAGTTTCATAATTTAAATTCCAATTTAGATAGGATTTTTGCACCTCCGTTGGAGGTTTTTGTTTGTCCTTTTTCTTCTTCTTCTTTTGATCAAGTTCCAGAAGAACTTGAAGAATGGGTTTCCGAGAATGTCAGGGATGCCGCTGCGCGGCCGTGGAGGCCTGTAAGTATTGTAGTAGAGGGTGATAGTCGTACAGGGAAGACAATGTGGGCTAGATCGTTAGGCCCACATAATTATTTGTGTGGTCATCTTGACCTCAGTCCAAAAGTATACAGTAATGATGCCTGGTACAACGTCATTGATGACGTAGACCCCCACTTCCTAAAGCACTTTAAAGAGTTCATGGGGGCACAGAGGGACTGGCAAAGCAACACAAAGTACGGGAAACCAATTCAAATTAAAGGTGGGATCCCAACAATCTTCCTCTGCAATCCAGGACCAACATCATCGTATAAAGAATACTTGGACGAGGAAAAGAATTCAGCACTCAAAGACTGGGCATTAAAGAATGCTGAATTCATCACCATCACACAACCATTGTACTCAGGTGCCCATCAAAGTCCAGCACAGAATAGCGAAGAGGAGACCAATTCGCAGGCGTCGAGTTGA
Protein Sequence MPRNNSFRINAKNFFLTYPDCSLTKDEALSQLQNLTTPTNKKYIKICREFHQNGNPHLHVLIQFEGKFQCKNNRFFDLVSQTRSAHFHPNIQGAKSSSDVKSYINKDGDTLEWGEFQIDGRSARGGQQSANDAYAKALNSGSKSEALNVIRELAPKDYVLQFHNLNSNLDRIFAPPLEVFVCPFSSSSFDQVPEELEEWVSENVRDAAARPWRPVSIVVEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNSALKDWALKNAEFITITQPLYSGAHQSPAQNSEEETNSQASS

NCBI Accession YP_008003517.1
Location 2156-2446
Gene Name AC4
Protein Name C4 protein
Coding Region ATGGGAACCCTCATCTCCACGTGCTCATCCAGTTCGAGGGCAAGTTCCAGTGCAAGAATAACAGATTCTTCGACCTGGTATCCCAAACCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTATATCAACAAGGACGGAGACACACTGGAATGGGGAGAGTTCCAGATCGATGGAAGAAGTGCTAGAGGAGGGCAACAATCAGCCAATGATGCTTACGCCAAAGCGCTTAACAGCGGAAGTAAGTCAGAGGCTCTTAATGTAA
Protein Sequence MGTLISTCSSSSRASSSARITDSSTWYPKPGQHISIQTFRELNPAPTSSPISTRTETHWNGESSRSMEEVLEEGNNQPMMLTPKRLTAEVSQRLLM