Ageratum yellow vein virus
Basic Information
Genus |
Begomovirus
|
NCBI Assembly |
GCF_000845825.1 |
Isolate |
China:Hainan province |
Release date |
2015/2/12 |
Submitter |
Xiong,Q., Fan,S., Wu,J., Zhou,X. |
Host |
|
Vector |
|
Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCGATTTTTTTTTTTAAAGTGGTCCCCACCACTAACAAAAATCCCCCACTTAGAACGCTCCCTCAAAGCCTATTTAATTCAAATCGACTATAAATACTTGGTCCCTACGTTTTTAAATTAAAGCAATGTGGGATCCTCTTTTGAACGAGTTTCCCCCGAAACCTGTAACCACCCGGGGTCCTTTAAGGGTGTTAATGCCTTTTGCCCGTAAAATATTGTCAGTTAATTCCGAACAGACATACTCTCCAGATACGGTTGGTTACGATCTTATACGAGATTTAATTTCCGTAATTCGTGCTCGCAATTATGTCGAAGCGACCCGCCGATATAGTCATTTCCACTCCCGCCTCGAAGGTACGACGCCGTCTGAACTTCGACACCCCCGTGATGAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACCAACAAAAGAAGGACGTGGATCAACAGGCCCGTGTATCGCAAGCCCAGAGTCTTCAGAATGTACAGAAGCCCTGATGTGCCCAAAGGTTGTGAAGGCCCATGTAAGGTCCAATCGTATGAACAGAAGCACGACATATCCCATGTGGGTAAAGTATTATGTGTTAGTGATGTCACTCGTGGTAGTGGTCTTACCCATCGTGTTGGTAAGAGATTCTGTGTGAAGTCCGTTTATGTATTGGGTAAAATATGGATGGATGAAAATATCAAAACGAAGAACCATACGAACACTGTGATGTTTTATCTTGTTCGTGACAGAAGGCCCTTTGGTACTGCCATGGATTTTGGTCAGGTGTTTAACATGTATGATAATGAGCCCAGTACTGCTACTGTCAAGAATGATCTTCGAGATCGTTATCAAGTTTTAAGGAAATTCACTTCAACAGTCACAGGTGGTCAATATGCTTCTAAGGAACAGGCGTTAGTTAGGAAATTTATGAAGATTAATAATTATGTAGTTTATAATCATCAAGAAGCTGCTAAGTATGAAAATCATACTGAAAATGCCTTGTTATTGTATATGGCTTGTACTCATGCCAGTAATCCAGTGTATACTACTTTGAAGATCAGAATCTATTTCTATGATTCTGTTCAGAATTAATAAAGATTGAATTTTATTATATTTGAATGTGTTACATATTCTGTGTTTTCCAATACATCCCATAATACATGATTACATGCTCTAATTACATTGTTAATACTAATTACACCCAAATTATCTAAATATTTCATACATTGAACCCTAAATACTCTTAAGAAACGCCAAGTCTGAGGTTGTAAGCGAGTCCAGATCTGGAAGATTAGAAAACACTGGTGTATTCCCAATGCTTTCCTCAGGTTGTGGTTGAATTGTATTTGGATCGTTATGATGTCGTGGTTGGTGTTGAATGGTCTCTCGTGGTGCTTGGTTATCTTGAAATATAGGGGATTTTTGATCGTCCAGGTATACACGCCACTCTCGCATTGAGTTGCAGTGAGTAATTCCCCTGTGCGAAAATCCATGATTTGCACAATCTATGCCGAAGTAGTATGAGCACCCGCACGTTAGATCAACTCTCCGTCTCCGAATAGGCTTCCTCTTGGCTATTCTGTGTTGCACTTTGATTGGTACCTGAGTACAATGGGCTGTTGAGGGTGATGAATTCTGCATTCTTTAATGCCCAATCTTTTAAAGCTGAATTTTTATCCTCATTCAAGTACTCTTTATATGATGATGTTGGTCCTGGATTGCAAAGGAAGATAGTTGGGATTCCACCTTTAATTTGAACTGGCTTCCCGTACTTAGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATAAATTCTTTAAAGTGCTTTAGATAGTGCGGGTCTACGTCATCAATGACGTTATACCAAGCATCATTACTGTATACTTTAGGGCTTAGATCAAGATGTCCACACAAATAATTGTGTGGTCCCAATGATCTGGCCCACATTGTTTTACCTGTACGACTATCACCTTCTATCACAATACTTTTGGGTCCCCAAGGCCGCGCAGCGGCACCACTCACATTCTCAGAAACCCACTCTTCAAGTTCTTCTGGAACTTGATCGAATGAAGAAGAAAGAAATGGACAAACAAAAACCTCTAAAGGAGGTGCAAAAATCCTATCTAAATTACTATTTAAATTATGAAACTGTAAAACAAAATCTTTAGGAGCCTTTTCCTTTAATATATTGAGGGCCTCTGCTTTGGACCCTGAATTGATTGCCTCGGCATATGCGTCGTTGGCAGTTTGGCAACCTCCTCTAGCTGATCTTCCATCGATTTGGAAAACTCCATGATCAAGCACGTCTCCGTCTTTTTCCATGTATGCTTTAACATCTGTTGAGCTTTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCTACTTGGGGAGGTGAGATCGAAGAATCTTTGATTCTTGCATTGGAATTTTCCTTCGAACTGGATGAGAACATGCAGGTGTGGAGTCCCATCTTCATGTAGCTCTCTGCAGATTCTGATGAATAGTTTATTTGTAGGTGTTTCTAGGGCTTTTAATTGGGAAAGTGCTTCCTCTTTTGTGAGTGAGCAGTGAGGGTATGTTAGGAAATAATTTTTTGCATTTATTCTGAATTTTGTAGGTGGAGGCATGTTGACTTGGTCAATTGGTGTCTCTCAAACTTGGATATGTAATTGGTGTCTGGGGTCTTATTTATATGTAGACACCAAATGGCATTATTGTAATTTCTTAAAGAAATTCAAATTCCAAAAGCGGCCATCCGTATAATATT
Gene Information
NCBI Accession
|
NP_671442.1
|
Location
|
137-508 |
Gene Name
|
AV2 |
Protein Name
|
pre-coat protein |
Coding Region
|
ATGTGGGATCCTCTTTTGAACGAGTTTCCCCCGAAACCTGTAACCACCCGGGGTCCTTTAAGGGTGTTAATGCCTTTTGCCCGTAAAATATTGTCAGTTAATTCCGAACAGACATACTCTCCAGATACGGTTGGTTACGATCTTATACGAGATTTAATTTCCGTAATTCGTGCTCGCAATTATGTCGAAGCGACCCGCCGATATAGTCATTTCCACTCCCGCCTCGAAGGTACGACGCCGTCTGAACTTCGACACCCCCGTGATGAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACCAACAAAAGAAGGACGTGGATCAACAGGCCCGTGTATCGCAAGCCCAGAGTCTTCAGAATGTACAGAAGCCCTGA |
Protein Sequence
|
MWDPLLNEFPPKPVTTRGPLRVLMPFARKILSVNSEQTYSPDTVGYDLIRDLISVIRARNYVEATRRYSHFHSRLEGTTPSELRHPRDEPCCCPHCPRHQQKKDVDQQARVSQAQSLQNVQKP |
NCBI Accession
|
NP_671443.1
|
Location
|
318-1091 |
Gene Name
|
AV1 |
Protein Name
|
coat protein |
Coding Region
|
ATGTCGAAGCGACCCGCCGATATAGTCATTTCCACTCCCGCCTCGAAGGTACGACGCCGTCTGAACTTCGACACCCCCGTGATGAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACCAACAAAAGAAGGACGTGGATCAACAGGCCCGTGTATCGCAAGCCCAGAGTCTTCAGAATGTACAGAAGCCCTGATGTGCCCAAAGGTTGTGAAGGCCCATGTAAGGTCCAATCGTATGAACAGAAGCACGACATATCCCATGTGGGTAAAGTATTATGTGTTAGTGATGTCACTCGTGGTAGTGGTCTTACCCATCGTGTTGGTAAGAGATTCTGTGTGAAGTCCGTTTATGTATTGGGTAAAATATGGATGGATGAAAATATCAAAACGAAGAACCATACGAACACTGTGATGTTTTATCTTGTTCGTGACAGAAGGCCCTTTGGTACTGCCATGGATTTTGGTCAGGTGTTTAACATGTATGATAATGAGCCCAGTACTGCTACTGTCAAGAATGATCTTCGAGATCGTTATCAAGTTTTAAGGAAATTCACTTCAACAGTCACAGGTGGTCAATATGCTTCTAAGGAACAGGCGTTAGTTAGGAAATTTATGAAGATTAATAATTATGTAGTTTATAATCATCAAGAAGCTGCTAAGTATGAAAATCATACTGAAAATGCCTTGTTATTGTATATGGCTTGTACTCATGCCAGTAATCCAGTGTATACTACTTTGAAGATCAGAATCTATTTCTATGATTCTGTTCAGAATTAA |
Protein Sequence
|
MSKRPADIVISTPASKVRRRLNFDTPVMSRAAAPTVLVTNKRRTWINRPVYRKPRVFRMYRSPDVPKGCEGPCKVQSYEQKHDISHVGKVLCVSDVTRGSGLTHRVGKRFCVKSVYVLGKIWMDENIKTKNHTNTVMFYLVRDRRPFGTAMDFGQVFNMYDNEPSTATVKNDLRDRYQVLRKFTSTVTGGQYASKEQALVRKFMKINNYVVYNHQEAAKYENHTENALLLYMACTHASNPVYTTLKIRIYFYDSVQN |
NCBI Accession
|
NP_671444.1
|
Location
|
1088-1492 |
Gene Name
|
AC3 |
Protein Name
|
replication enhancer protein |
Coding Region
|
ATGGATTTTCGCACAGGGGAATTACTCACTGCAACTCAATGCGAGAGTGGCGTGTATACCTGGACGATCAAAAATCCCCTATATTTCAAGATAACCAAGCACCACGAGAGACCATTCAACACCAACCACGACATCATAACGATCCAAATACAATTCAACCACAACCTGAGGAAAGCATTGGGAATACACCAGTGTTTTCTAATCTTCCAGATCTGGACTCGCTTACAACCTCAGACTTGGCGTTTCTTAAGAGTATTTAGGGTTCAATGTATGAAATATTTAGATAATTTGGGTGTAATTAGTATTAACAATGTAATTAGAGCATGTAATCATGTATTATGGGATGTATTGGAAAACACAGAATATGTAACACATTCAAATATAATAAAATTCAATCTTTATTAA |
Protein Sequence
|
MDFRTGELLTATQCESGVYTWTIKNPLYFKITKHHERPFNTNHDIITIQIQFNHNLRKALGIHQCFLIFQIWTRLQPQTWRFLRVFRVQCMKYLDNLGVISINNVIRACNHVLWDVLENTEYVTHSNIIKFNLY |
NCBI Accession
|
NP_671445.1
|
Location
|
1233-1640 |
Gene Name
|
AC2 |
Protein Name
|
transcriptional activator protein |
Coding Region
|
ATGCAGAATTCATCACCCTCAACAGCCCATTGTACTCAGGTACCAATCAAAGTGCAACACAGAATAGCCAAGAGGAAGCCTATTCGGAGACGGAGAGTTGATCTAACGTGCGGGTGCTCATACTACTTCGGCATAGATTGTGCAAATCATGGATTTTCGCACAGGGGAATTACTCACTGCAACTCAATGCGAGAGTGGCGTGTATACCTGGACGATCAAAAATCCCCTATATTTCAAGATAACCAAGCACCACGAGAGACCATTCAACACCAACCACGACATCATAACGATCCAAATACAATTCAACCACAACCTGAGGAAAGCATTGGGAATACACCAGTGTTTTCTAATCTTCCAGATCTGGACTCGCTTACAACCTCAGACTTGGCGTTTCTTAAGAGTATTTAG |
Protein Sequence
|
MQNSSPSTAHCTQVPIKVQHRIAKRKPIRRRRVDLTCGCSYYFGIDCANHGFSHRGITHCNSMREWRVYLDDQKSPIFQDNQAPRETIQHQPRHHNDPNTIQPQPEESIGNTPVFSNLPDLDSLTTSDLAFLKSI |
NCBI Accession
|
NP_671446.1
|
Location
|
1540-2628 |
Gene Name
|
AC1 |
Protein Name
|
rep protein |
Coding Region
|
ATGCCTCCACCTACAAAATTCAGAATAAATGCAAAAAATTATTTCCTAACATACCCTCACTGCTCACTCACAAAAGAGGAAGCACTTTCCCAATTAAAAGCCCTAGAAACACCTACAAATAAACTATTCATCAGAATCTGCAGAGAGCTACATGAAGATGGGACTCCACACCTGCATGTTCTCATCCAGTTCGAAGGAAAATTCCAATGCAAGAATCAAAGATTCTTCGATCTCACCTCCCCAAGTAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAAAGCTCAACAGATGTTAAAGCATACATGGAAAAAGACGGAGACGTGCTTGATCATGGAGTTTTCCAAATCGATGGAAGATCAGCTAGAGGAGGTTGCCAAACTGCCAACGACGCATATGCCGAGGCAATCAATTCAGGGTCCAAAGCAGAGGCCCTCAATATATTAAAGGAAAAGGCTCCTAAAGATTTTGTTTTACAGTTTCATAATTTAAATAGTAATTTAGATAGGATTTTTGCACCTCCTTTAGAGGTTTTTGTTTGTCCATTTCTTTCTTCTTCATTCGATCAAGTTCCAGAAGAACTTGAAGAGTGGGTTTCTGAGAATGTGAGTGGTGCCGCTGCGCGGCCTTGGGGACCCAAAAGTATTGTGATAGAAGGTGATAGTCGTACAGGTAAAACAATGTGGGCCAGATCATTGGGACCACACAATTATTTGTGTGGACATCTTGATCTAAGCCCTAAAGTATACAGTAATGATGCTTGGTATAACGTCATTGATGACGTAGACCCGCACTATCTAAAGCACTTTAAAGAATTTATGGGGGCCCAAAGGGACTGGCAAAGCAACACTAAGTACGGGAAGCCAGTTCAAATTAAAGGTGGAATCCCAACTATCTTCCTTTGCAATCCAGGACCAACATCATCATATAAAGAGTACTTGAATGAGGATAAAAATTCAGCTTTAAAAGATTGGGCATTAAAGAATGCAGAATTCATCACCCTCAACAGCCCATTGTACTCAGGTACCAATCAAAGTGCAACACAGAATAGCCAAGAGGAAGCCTATTCGGAGACGGAGAGTTGA |
Protein Sequence
|
MPPPTKFRINAKNYFLTYPHCSLTKEEALSQLKALETPTNKLFIRICRELHEDGTPHLHVLIQFEGKFQCKNQRFFDLTSPSRSAHFHPNIQGAKSSTDVKAYMEKDGDVLDHGVFQIDGRSARGGCQTANDAYAEAINSGSKAEALNILKEKAPKDFVLQFHNLNSNLDRIFAPPLEVFVCPFLSSSFDQVPEELEEWVSENVSGAAARPWGPKSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPTSSYKEYLNEDKNSALKDWALKNAEFITLNSPLYSGTNQSATQNSQEEAYSETES |
NCBI Accession
|
NP_671447.1
|
Location
|
2178-2471 |
Gene Name
|
AC4 |
Protein Name
|
transcriptional regulator protein |
Coding Region
|
ATGGGACTCCACACCTGCATGTTCTCATCCAGTTCGAAGGAAAATTCCAATGCAAGAATCAAAGATTCTTCGATCTCACCTCCCCAAGTAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAAAGCTCAACAGATGTTAAAGCATACATGGAAAAAGACGGAGACGTGCTTGATCATGGAGTTTTCCAAATCGATGGAAGATCAGCTAGAGGAGGTTGCCAAACTGCCAACGACGCATATGCCGAGGCAATCAATTCAGGGTCCAAAGCAGAGGCCCTCAATATATTAA |
Protein Sequence
|
MGLHTCMFSSSSKENSNARIKDSSISPPQVGQHISIRTFRELKAQQMLKHTWKKTETCLIMEFSKSMEDQLEEVAKLPTTHMPRQSIQGPKQRPSIY |