Ageratum yellow vein virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_000845825.1
Isolate China:Hainan province
Release date 2015/2/12
Submitter Xiong,Q., Fan,S., Wu,J., Zhou,X.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_004090
ACCGGATGGCCGCGATTTTTTTTTTTAAAGTGGTCCCCACCACTAACAAAAATCCCCCACTTAGAACGCTCCCTCAAAGCCTATTTAATTCAAATCGACTATAAATACTTGGTCCCTACGTTTTTAAATTAAAGCAATGTGGGATCCTCTTTTGAACGAGTTTCCCCCGAAACCTGTAACCACCCGGGGTCCTTTAAGGGTGTTAATGCCTTTTGCCCGTAAAATATTGTCAGTTAATTCCGAACAGACATACTCTCCAGATACGGTTGGTTACGATCTTATACGAGATTTAATTTCCGTAATTCGTGCTCGCAATTATGTCGAAGCGACCCGCCGATATAGTCATTTCCACTCCCGCCTCGAAGGTACGACGCCGTCTGAACTTCGACACCCCCGTGATGAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACCAACAAAAGAAGGACGTGGATCAACAGGCCCGTGTATCGCAAGCCCAGAGTCTTCAGAATGTACAGAAGCCCTGATGTGCCCAAAGGTTGTGAAGGCCCATGTAAGGTCCAATCGTATGAACAGAAGCACGACATATCCCATGTGGGTAAAGTATTATGTGTTAGTGATGTCACTCGTGGTAGTGGTCTTACCCATCGTGTTGGTAAGAGATTCTGTGTGAAGTCCGTTTATGTATTGGGTAAAATATGGATGGATGAAAATATCAAAACGAAGAACCATACGAACACTGTGATGTTTTATCTTGTTCGTGACAGAAGGCCCTTTGGTACTGCCATGGATTTTGGTCAGGTGTTTAACATGTATGATAATGAGCCCAGTACTGCTACTGTCAAGAATGATCTTCGAGATCGTTATCAAGTTTTAAGGAAATTCACTTCAACAGTCACAGGTGGTCAATATGCTTCTAAGGAACAGGCGTTAGTTAGGAAATTTATGAAGATTAATAATTATGTAGTTTATAATCATCAAGAAGCTGCTAAGTATGAAAATCATACTGAAAATGCCTTGTTATTGTATATGGCTTGTACTCATGCCAGTAATCCAGTGTATACTACTTTGAAGATCAGAATCTATTTCTATGATTCTGTTCAGAATTAATAAAGATTGAATTTTATTATATTTGAATGTGTTACATATTCTGTGTTTTCCAATACATCCCATAATACATGATTACATGCTCTAATTACATTGTTAATACTAATTACACCCAAATTATCTAAATATTTCATACATTGAACCCTAAATACTCTTAAGAAACGCCAAGTCTGAGGTTGTAAGCGAGTCCAGATCTGGAAGATTAGAAAACACTGGTGTATTCCCAATGCTTTCCTCAGGTTGTGGTTGAATTGTATTTGGATCGTTATGATGTCGTGGTTGGTGTTGAATGGTCTCTCGTGGTGCTTGGTTATCTTGAAATATAGGGGATTTTTGATCGTCCAGGTATACACGCCACTCTCGCATTGAGTTGCAGTGAGTAATTCCCCTGTGCGAAAATCCATGATTTGCACAATCTATGCCGAAGTAGTATGAGCACCCGCACGTTAGATCAACTCTCCGTCTCCGAATAGGCTTCCTCTTGGCTATTCTGTGTTGCACTTTGATTGGTACCTGAGTACAATGGGCTGTTGAGGGTGATGAATTCTGCATTCTTTAATGCCCAATCTTTTAAAGCTGAATTTTTATCCTCATTCAAGTACTCTTTATATGATGATGTTGGTCCTGGATTGCAAAGGAAGATAGTTGGGATTCCACCTTTAATTTGAACTGGCTTCCCGTACTTAGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATAAATTCTTTAAAGTGCTTTAGATAGTGCGGGTCTACGTCATCAATGACGTTATACCAAGCATCATTACTGTATACTTTAGGGCTTAGATCAAGATGTCCACACAAATAATTGTGTGGTCCCAATGATCTGGCCCACATTGTTTTACCTGTACGACTATCACCTTCTATCACAATACTTTTGGGTCCCCAAGGCCGCGCAGCGGCACCACTCACATTCTCAGAAACCCACTCTTCAAGTTCTTCTGGAACTTGATCGAATGAAGAAGAAAGAAATGGACAAACAAAAACCTCTAAAGGAGGTGCAAAAATCCTATCTAAATTACTATTTAAATTATGAAACTGTAAAACAAAATCTTTAGGAGCCTTTTCCTTTAATATATTGAGGGCCTCTGCTTTGGACCCTGAATTGATTGCCTCGGCATATGCGTCGTTGGCAGTTTGGCAACCTCCTCTAGCTGATCTTCCATCGATTTGGAAAACTCCATGATCAAGCACGTCTCCGTCTTTTTCCATGTATGCTTTAACATCTGTTGAGCTTTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCTACTTGGGGAGGTGAGATCGAAGAATCTTTGATTCTTGCATTGGAATTTTCCTTCGAACTGGATGAGAACATGCAGGTGTGGAGTCCCATCTTCATGTAGCTCTCTGCAGATTCTGATGAATAGTTTATTTGTAGGTGTTTCTAGGGCTTTTAATTGGGAAAGTGCTTCCTCTTTTGTGAGTGAGCAGTGAGGGTATGTTAGGAAATAATTTTTTGCATTTATTCTGAATTTTGTAGGTGGAGGCATGTTGACTTGGTCAATTGGTGTCTCTCAAACTTGGATATGTAATTGGTGTCTGGGGTCTTATTTATATGTAGACACCAAATGGCATTATTGTAATTTCTTAAAGAAATTCAAATTCCAAAAGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession NP_671442.1
Location 137-508
Gene Name AV2
Protein Name pre-coat protein
Coding Region ATGTGGGATCCTCTTTTGAACGAGTTTCCCCCGAAACCTGTAACCACCCGGGGTCCTTTAAGGGTGTTAATGCCTTTTGCCCGTAAAATATTGTCAGTTAATTCCGAACAGACATACTCTCCAGATACGGTTGGTTACGATCTTATACGAGATTTAATTTCCGTAATTCGTGCTCGCAATTATGTCGAAGCGACCCGCCGATATAGTCATTTCCACTCCCGCCTCGAAGGTACGACGCCGTCTGAACTTCGACACCCCCGTGATGAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACCAACAAAAGAAGGACGTGGATCAACAGGCCCGTGTATCGCAAGCCCAGAGTCTTCAGAATGTACAGAAGCCCTGA
Protein Sequence MWDPLLNEFPPKPVTTRGPLRVLMPFARKILSVNSEQTYSPDTVGYDLIRDLISVIRARNYVEATRRYSHFHSRLEGTTPSELRHPRDEPCCCPHCPRHQQKKDVDQQARVSQAQSLQNVQKP

NCBI Accession NP_671443.1
Location 318-1091
Gene Name AV1
Protein Name coat protein
Coding Region ATGTCGAAGCGACCCGCCGATATAGTCATTTCCACTCCCGCCTCGAAGGTACGACGCCGTCTGAACTTCGACACCCCCGTGATGAGCCGTGCTGCTGCCCCCACTGTCCTCGTCACCAACAAAAGAAGGACGTGGATCAACAGGCCCGTGTATCGCAAGCCCAGAGTCTTCAGAATGTACAGAAGCCCTGATGTGCCCAAAGGTTGTGAAGGCCCATGTAAGGTCCAATCGTATGAACAGAAGCACGACATATCCCATGTGGGTAAAGTATTATGTGTTAGTGATGTCACTCGTGGTAGTGGTCTTACCCATCGTGTTGGTAAGAGATTCTGTGTGAAGTCCGTTTATGTATTGGGTAAAATATGGATGGATGAAAATATCAAAACGAAGAACCATACGAACACTGTGATGTTTTATCTTGTTCGTGACAGAAGGCCCTTTGGTACTGCCATGGATTTTGGTCAGGTGTTTAACATGTATGATAATGAGCCCAGTACTGCTACTGTCAAGAATGATCTTCGAGATCGTTATCAAGTTTTAAGGAAATTCACTTCAACAGTCACAGGTGGTCAATATGCTTCTAAGGAACAGGCGTTAGTTAGGAAATTTATGAAGATTAATAATTATGTAGTTTATAATCATCAAGAAGCTGCTAAGTATGAAAATCATACTGAAAATGCCTTGTTATTGTATATGGCTTGTACTCATGCCAGTAATCCAGTGTATACTACTTTGAAGATCAGAATCTATTTCTATGATTCTGTTCAGAATTAA
Protein Sequence MSKRPADIVISTPASKVRRRLNFDTPVMSRAAAPTVLVTNKRRTWINRPVYRKPRVFRMYRSPDVPKGCEGPCKVQSYEQKHDISHVGKVLCVSDVTRGSGLTHRVGKRFCVKSVYVLGKIWMDENIKTKNHTNTVMFYLVRDRRPFGTAMDFGQVFNMYDNEPSTATVKNDLRDRYQVLRKFTSTVTGGQYASKEQALVRKFMKINNYVVYNHQEAAKYENHTENALLLYMACTHASNPVYTTLKIRIYFYDSVQN

NCBI Accession NP_671444.1
Location 1088-1492
Gene Name AC3
Protein Name replication enhancer protein
Coding Region ATGGATTTTCGCACAGGGGAATTACTCACTGCAACTCAATGCGAGAGTGGCGTGTATACCTGGACGATCAAAAATCCCCTATATTTCAAGATAACCAAGCACCACGAGAGACCATTCAACACCAACCACGACATCATAACGATCCAAATACAATTCAACCACAACCTGAGGAAAGCATTGGGAATACACCAGTGTTTTCTAATCTTCCAGATCTGGACTCGCTTACAACCTCAGACTTGGCGTTTCTTAAGAGTATTTAGGGTTCAATGTATGAAATATTTAGATAATTTGGGTGTAATTAGTATTAACAATGTAATTAGAGCATGTAATCATGTATTATGGGATGTATTGGAAAACACAGAATATGTAACACATTCAAATATAATAAAATTCAATCTTTATTAA
Protein Sequence MDFRTGELLTATQCESGVYTWTIKNPLYFKITKHHERPFNTNHDIITIQIQFNHNLRKALGIHQCFLIFQIWTRLQPQTWRFLRVFRVQCMKYLDNLGVISINNVIRACNHVLWDVLENTEYVTHSNIIKFNLY

NCBI Accession NP_671445.1
Location 1233-1640
Gene Name AC2
Protein Name transcriptional activator protein
Coding Region ATGCAGAATTCATCACCCTCAACAGCCCATTGTACTCAGGTACCAATCAAAGTGCAACACAGAATAGCCAAGAGGAAGCCTATTCGGAGACGGAGAGTTGATCTAACGTGCGGGTGCTCATACTACTTCGGCATAGATTGTGCAAATCATGGATTTTCGCACAGGGGAATTACTCACTGCAACTCAATGCGAGAGTGGCGTGTATACCTGGACGATCAAAAATCCCCTATATTTCAAGATAACCAAGCACCACGAGAGACCATTCAACACCAACCACGACATCATAACGATCCAAATACAATTCAACCACAACCTGAGGAAAGCATTGGGAATACACCAGTGTTTTCTAATCTTCCAGATCTGGACTCGCTTACAACCTCAGACTTGGCGTTTCTTAAGAGTATTTAG
Protein Sequence MQNSSPSTAHCTQVPIKVQHRIAKRKPIRRRRVDLTCGCSYYFGIDCANHGFSHRGITHCNSMREWRVYLDDQKSPIFQDNQAPRETIQHQPRHHNDPNTIQPQPEESIGNTPVFSNLPDLDSLTTSDLAFLKSI

NCBI Accession NP_671446.1
Location 1540-2628
Gene Name AC1
Protein Name rep protein
Coding Region ATGCCTCCACCTACAAAATTCAGAATAAATGCAAAAAATTATTTCCTAACATACCCTCACTGCTCACTCACAAAAGAGGAAGCACTTTCCCAATTAAAAGCCCTAGAAACACCTACAAATAAACTATTCATCAGAATCTGCAGAGAGCTACATGAAGATGGGACTCCACACCTGCATGTTCTCATCCAGTTCGAAGGAAAATTCCAATGCAAGAATCAAAGATTCTTCGATCTCACCTCCCCAAGTAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAAAGCTCAACAGATGTTAAAGCATACATGGAAAAAGACGGAGACGTGCTTGATCATGGAGTTTTCCAAATCGATGGAAGATCAGCTAGAGGAGGTTGCCAAACTGCCAACGACGCATATGCCGAGGCAATCAATTCAGGGTCCAAAGCAGAGGCCCTCAATATATTAAAGGAAAAGGCTCCTAAAGATTTTGTTTTACAGTTTCATAATTTAAATAGTAATTTAGATAGGATTTTTGCACCTCCTTTAGAGGTTTTTGTTTGTCCATTTCTTTCTTCTTCATTCGATCAAGTTCCAGAAGAACTTGAAGAGTGGGTTTCTGAGAATGTGAGTGGTGCCGCTGCGCGGCCTTGGGGACCCAAAAGTATTGTGATAGAAGGTGATAGTCGTACAGGTAAAACAATGTGGGCCAGATCATTGGGACCACACAATTATTTGTGTGGACATCTTGATCTAAGCCCTAAAGTATACAGTAATGATGCTTGGTATAACGTCATTGATGACGTAGACCCGCACTATCTAAAGCACTTTAAAGAATTTATGGGGGCCCAAAGGGACTGGCAAAGCAACACTAAGTACGGGAAGCCAGTTCAAATTAAAGGTGGAATCCCAACTATCTTCCTTTGCAATCCAGGACCAACATCATCATATAAAGAGTACTTGAATGAGGATAAAAATTCAGCTTTAAAAGATTGGGCATTAAAGAATGCAGAATTCATCACCCTCAACAGCCCATTGTACTCAGGTACCAATCAAAGTGCAACACAGAATAGCCAAGAGGAAGCCTATTCGGAGACGGAGAGTTGA
Protein Sequence MPPPTKFRINAKNYFLTYPHCSLTKEEALSQLKALETPTNKLFIRICRELHEDGTPHLHVLIQFEGKFQCKNQRFFDLTSPSRSAHFHPNIQGAKSSTDVKAYMEKDGDVLDHGVFQIDGRSARGGCQTANDAYAEAINSGSKAEALNILKEKAPKDFVLQFHNLNSNLDRIFAPPLEVFVCPFLSSSFDQVPEELEEWVSENVSGAAARPWGPKSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPTSSYKEYLNEDKNSALKDWALKNAEFITLNSPLYSGTNQSATQNSQEEAYSETES

NCBI Accession NP_671447.1
Location 2178-2471
Gene Name AC4
Protein Name transcriptional regulator protein
Coding Region ATGGGACTCCACACCTGCATGTTCTCATCCAGTTCGAAGGAAAATTCCAATGCAAGAATCAAAGATTCTTCGATCTCACCTCCCCAAGTAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAAAGCTCAACAGATGTTAAAGCATACATGGAAAAAGACGGAGACGTGCTTGATCATGGAGTTTTCCAAATCGATGGAAGATCAGCTAGAGGAGGTTGCCAAACTGCCAACGACGCATATGCCGAGGCAATCAATTCAGGGTCCAAAGCAGAGGCCCTCAATATATTAA
Protein Sequence MGLHTCMFSSSSKENSNARIKDSSISPPQVGQHISIRTFRELKAQQMLKHTWKKTETCLIMEFSKSMEDQLEEVAKLPTTHMPRQSIQGPKQRPSIY