Ludwigia yellow vein virus
Basic Information
| Genus |
Begomovirus
|
| NCBI Assembly |
GCF_000865765.1 |
| Isolate |
China:Guangxi |
| Release date |
2015/2/13 |
| Submitter |
Huang,J., Jiang,T., Zhou,X. |
| Host |
|
| Vector |
|
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCGCAAATTTTTGTCCTCTTTTACTTTAGTGGACCCCACGCACTATCTTTGGTCGGCCAATGAGAATGCGCGCTCAAAGCTTAGATATCCTTGTGGTCCCGCCATAAATAACTTCCCCTCGAAGGTAAATTCAAAATGTGGGATCCGTTGGAACACGAGTTTCCGGAAACTCTTCACGGTTTCCGTTGTATGCTCGCTATCAAATACCTGCAGACTGTAGCGGATACGTATGCTCCGGATACGGTAGGTTACGATCTTATTCGTGATTTAATTTCTATTGTACGAGCTGGCAACTATGTCGAAGCGACCCGCCGATATAGTCATTTCAACACCCGTCTCCAAAGTACGTCGCCGGTTGAACTTCGATTCCCCCGGAATGAACCGTGCTGCTGCCCGCACTGTCCTCGGCATAACCCGAAAGAATGCCTGGACGTACAGGCCCACGTATCGCAAGCCCAGACTGTACAGAATGTACAGAAGCCCTGATGTCCCGCGTGGTTGTGAGGGTCCATGTAAGGTTCAGTCTTTCGAGAAAAAGCACGATGTTGGTCATACGGGTACATTATTATGTGTGTCGGATGTTACTCGTGGAAATGGGTTGACTCATCGCACTGGGAAGAGGTTCTGTATTAAGTCTATTTACATTCTGGGTAAGTTATGGATGGATGAGAACATCAAGACGAAGAATCACACGAACACAGTCATGTTCTGGTTAGTTAGGGATAGGCGTCCTGTGACAACGCCCTATGGGTTCGGCGAGGCATTCAACATGTACGACAATGAGCCCAGTACAGCCACTATCAAGAACGATCTTCGTGATCGTCTGCAGGTGCTGCATAGGTTTCAAGCCACGCTCACTGGAGGGCAGTACGCGTGCAAGGAACAGGTCATGGTGAAGAAGTTCTGGAAGATCAACAATCACGTCGTCTACAACCATCAGGAGAAGGCTGCTTACGAGAATCACACTGAGAACGCATTAATATTGTATATGGCATGTACTCATGCCTCTAACCCCGTGTATGCTACACTGAAGATCCGCATCTACTTCTATGATTCAGTCCAGAATTAATAAAGATTATATTTTATTATATGTGTCAATTGAGCATCAATTGTGCCCTCCAGTACATCATACAGTACATGATTTATAGCCCTAATTACATTGTTGACACTAATAATGCCTAATTTATCTAAGTACTGCATACATTGAACTTTAAATACTCTTGAGAAACGCCCAGTCTGAGGACGTAAACGAGTCCAGATCTGGCAGATCAGGAAACACTGGTGCATCCCCAGTGCTTTCCTCAGGTTGTAGTTGAACTGGACCTGGATTGTTATTACGTCGTGGTCCCTCAGGAATGGCCTCTCCAGGTGCTTGGTAATCTTGAAATAGAGGGGATTTCTGACCGTCCAGGTATAGACGCCACTCTCTGCCTGAGTTGCAGTGATGTACTCCCCGGTGCGAAAATCCATGGTTGGCACAGGTTATTGGAAAGAAGTAAGAGCAGCCGCAGGGTAGATCAACTCTCCTCCTGCGGATTGTCCTCTTCTTGGCTATTCTGTGCTGTACTTTGATGGGTACCTGAGTACAGTGGCTCTGAGAGGAAGACGAATTCTGCATTCTTCAGTGCCCAGGACTTCAAAGCTGAATTCTTATCCTCGTCGAGATATTCCTTATATGATGATGTCGGTCCCAGGATTGCATAGGAAGATTGTCGGAATGCCCCCTTTAATTTGAATGGGCTTGCCGTACTTGGTGTTGCTTTGCCAATCCCGTTGGGCCCCCATGAATTCCTTAAAGTGCTTTAGATAGTGGGGGTCAACATCATCGATGACGTTATACCATGCGTCATTTGAGTAGATCTTGGGGCTCAAGTCTAGATGCCCACAAAGGTAATTATGTGGGCCTAGTGATCTGGCCCACATTGTCTTCCCAGTTCTACTCTCTCCCTCTACTACTATACTGACCGGTCGCCAAGGCCGCGCAGCGGCATCCCTGACATTCTCCTCCGCCCAACATTCAAGTTCTTCCGGAACTTGATCGAATGAAGAAGCTAAAAAAGGAGAAACAAAAACCTCTGCAGGAGGTGCAAAAATCCTATCTAAATTAGAATTTAAATTGTGAAACTGAAATATATATTCTTTAGGTAATTTTTCTCTAATAATAGATAAAGCAGCTTCCTTTGAACCTGCATTCAGCGCTTCTGCTGCTGCATCATTAGCCGTCTGCTGACCTCCTCTAGCAGATCTTCCGTCGACTTGAAAAACACCCCAGTCGACGTAATCACCGTCCTTCTCGATATAGGACTTGACATCAGAACTGGACTTGGCTCCTTGGAAGTTCGGATGGAATTGTGAGGAGGTGTTGGGATGCGTAATGTCAAAATGCCTGGGGTTCCTGAATTGGGCTTTACCTTTGAATTGGATGAGGGCATGGAGATGCAGTGTCCCATCGGAGTGTTTCTCTTGAGCTACTCTGATGAATAATTTATCGGATGGGCAGTGAATAGCCTTTATAAGCTCTAGTGCCTCTTCTTTGGGAATAGGGCATTTGGGATAAGTGAGAAATATGTTTTTGGCTTTTATTTGGAATGAACGAGGACGAGGCATGTTGAGAACTGAATCGGGGGCTCTCAAAACTCTACGGAATGGGGTGCTCGGGGTGCCTATATATGTTGAGCCCCCTAATGGCAGATTTGTAATTTTCAAAGAAAATTTCAAATTCCAAAAGCGGCCATCCGTATAATATT
Gene Information
|
NCBI Accession
|
YP_271818.1
|
|
Location
|
147-497 |
|
Gene Name
|
av2 |
|
Protein Name
|
AV2 protein |
|
Coding Region
|
ATGTGGGATCCGTTGGAACACGAGTTTCCGGAAACTCTTCACGGTTTCCGTTGTATGCTCGCTATCAAATACCTGCAGACTGTAGCGGATACGTATGCTCCGGATACGGTAGGTTACGATCTTATTCGTGATTTAATTTCTATTGTACGAGCTGGCAACTATGTCGAAGCGACCCGCCGATATAGTCATTTCAACACCCGTCTCCAAAGTACGTCGCCGGTTGAACTTCGATTCCCCCGGAATGAACCGTGCTGCTGCCCGCACTGTCCTCGGCATAACCCGAAAGAATGCCTGGACGTACAGGCCCACGTATCGCAAGCCCAGACTGTACAGAATGTACAGAAGCCCTGA |
|
Protein Sequence
|
MWDPLEHEFPETLHGFRCMLAIKYLQTVADTYAPDTVGYDLIRDLISIVRAGNYVEATRRYSHFNTRLQSTSPVELRFPRNEPCCCPHCPRHNPKECLDVQAHVSQAQTVQNVQKP |
|
NCBI Accession
|
YP_271819.1
|
|
Location
|
307-1080 |
|
Gene Name
|
cp |
|
Protein Name
|
CP protein |
|
Coding Region
|
ATGTCGAAGCGACCCGCCGATATAGTCATTTCAACACCCGTCTCCAAAGTACGTCGCCGGTTGAACTTCGATTCCCCCGGAATGAACCGTGCTGCTGCCCGCACTGTCCTCGGCATAACCCGAAAGAATGCCTGGACGTACAGGCCCACGTATCGCAAGCCCAGACTGTACAGAATGTACAGAAGCCCTGATGTCCCGCGTGGTTGTGAGGGTCCATGTAAGGTTCAGTCTTTCGAGAAAAAGCACGATGTTGGTCATACGGGTACATTATTATGTGTGTCGGATGTTACTCGTGGAAATGGGTTGACTCATCGCACTGGGAAGAGGTTCTGTATTAAGTCTATTTACATTCTGGGTAAGTTATGGATGGATGAGAACATCAAGACGAAGAATCACACGAACACAGTCATGTTCTGGTTAGTTAGGGATAGGCGTCCTGTGACAACGCCCTATGGGTTCGGCGAGGCATTCAACATGTACGACAATGAGCCCAGTACAGCCACTATCAAGAACGATCTTCGTGATCGTCTGCAGGTGCTGCATAGGTTTCAAGCCACGCTCACTGGAGGGCAGTACGCGTGCAAGGAACAGGTCATGGTGAAGAAGTTCTGGAAGATCAACAATCACGTCGTCTACAACCATCAGGAGAAGGCTGCTTACGAGAATCACACTGAGAACGCATTAATATTGTATATGGCATGTACTCATGCCTCTAACCCCGTGTATGCTACACTGAAGATCCGCATCTACTTCTATGATTCAGTCCAGAATTAA |
|
Protein Sequence
|
MSKRPADIVISTPVSKVRRRLNFDSPGMNRAAARTVLGITRKNAWTYRPTYRKPRLYRMYRSPDVPRGCEGPCKVQSFEKKHDVGHTGTLLCVSDVTRGNGLTHRTGKRFCIKSIYILGKLWMDENIKTKNHTNTVMFWLVRDRRPVTTPYGFGEAFNMYDNEPSTATIKNDLRDRLQVLHRFQATLTGGQYACKEQVMVKKFWKINNHVVYNHQEKAAYENHTENALILYMACTHASNPVYATLKIRIYFYDSVQN |
|
NCBI Accession
|
YP_271820.1
|
|
Location
|
1077-1481 |
|
Gene Name
|
ac3 |
|
Protein Name
|
AC3 protein |
|
Coding Region
|
ATGGATTTTCGCACCGGGGAGTACATCACTGCAACTCAGGCAGAGAGTGGCGTCTATACCTGGACGGTCAGAAATCCCCTCTATTTCAAGATTACCAAGCACCTGGAGAGGCCATTCCTGAGGGACCACGACGTAATAACAATCCAGGTCCAGTTCAACTACAACCTGAGGAAAGCACTGGGGATGCACCAGTGTTTCCTGATCTGCCAGATCTGGACTCGTTTACGTCCTCAGACTGGGCGTTTCTCAAGAGTATTTAAAGTTCAATGTATGCAGTACTTAGATAAATTAGGCATTATTAGTGTCAACAATGTAATTAGGGCTATAAATCATGTACTGTATGATGTACTGGAGGGCACAATTGATGCTCAATTGACACATATAATAAAATATAATCTTTATTAA |
|
Protein Sequence
|
MDFRTGEYITATQAESGVYTWTVRNPLYFKITKHLERPFLRDHDVITIQVQFNYNLRKALGMHQCFLICQIWTRLRPQTGRFSRVFKVQCMQYLDKLGIISVNNVIRAINHVLYDVLEGTIDAQLTHIIKYNLY |
|
NCBI Accession
|
YP_271821.1
|
|
Location
|
1222-1629 |
|
Gene Name
|
ac2 |
|
Protein Name
|
AC2 protein |
|
Coding Region
|
ATGCAGAATTCGTCTTCCTCTCAGAGCCACTGTACTCAGGTACCCATCAAAGTACAGCACAGAATAGCCAAGAAGAGGACAATCCGCAGGAGGAGAGTTGATCTACCCTGCGGCTGCTCTTACTTCTTTCCAATAACCTGTGCCAACCATGGATTTTCGCACCGGGGAGTACATCACTGCAACTCAGGCAGAGAGTGGCGTCTATACCTGGACGGTCAGAAATCCCCTCTATTTCAAGATTACCAAGCACCTGGAGAGGCCATTCCTGAGGGACCACGACGTAATAACAATCCAGGTCCAGTTCAACTACAACCTGAGGAAAGCACTGGGGATGCACCAGTGTTTCCTGATCTGCCAGATCTGGACTCGTTTACGTCCTCAGACTGGGCGTTTCTCAAGAGTATTTAA |
|
Protein Sequence
|
MQNSSSSQSHCTQVPIKVQHRIAKKRTIRRRRVDLPCGCSYFFPITCANHGFSHRGVHHCNSGREWRLYLDGQKSPLFQDYQAPGEAIPEGPRRNNNPGPVQLQPEESTGDAPVFPDLPDLDSFTSSDWAFLKSI |
|
NCBI Accession
|
YP_271822.1
|
|
Location
|
1683-2618 |
|
Gene Name
|
ac1 |
|
Protein Name
|
AC1 protein |
|
Coding Region
|
ATGCCTCGTCCTCGTTCATTCCAAATAAAAGCCAAAAACATATTTCTCACTTATCCCAAATGCCCTATTCCCAAAGAAGAGGCACTAGAGCTTATAAAGGCTATTCACTGCCCATCCGATAAATTATTCATCAGAGTAGCTCAAGAGAAACACTCCGATGGGACACTGCATCTCCATGCCCTCATCCAATTCAAAGGTAAAGCCCAATTCAGGAACCCCAGGCATTTTGACATTACGCATCCCAACACCTCCTCACAATTCCATCCGAACTTCCAAGGAGCCAAGTCCAGTTCTGATGTCAAGTCCTATATCGAGAAGGACGGTGATTACGTCGACTGGGGTGTTTTTCAAGTCGACGGAAGATCTGCTAGAGGAGGTCAGCAGACGGCTAATGATGCAGCAGCAGAAGCGCTGAATGCAGGTTCAAAGGAAGCTGCTTTATCTATTATTAGAGAAAAATTACCTAAAGAATATATATTTCAGTTTCACAATTTAAATTCTAATTTAGATAGGATTTTTGCACCTCCTGCAGAGGTTTTTGTTTCTCCTTTTTTAGCTTCTTCATTCGATCAAGTTCCGGAAGAACTTGAATGTTGGGCGGAGGAGAATGTCAGGGATGCCGCTGCGCGGCCTTGGCGACCGGTCAGTATAGTAGTAGAGGGAGAGAGTAGAACTGGGAAGACAATGTGGGCCAGATCACTAGGCCCACATAATTACCTTTGTGGGCATCTAGACTTGAGCCCCAAGATCTACTCAAATGACGCATGGTATAACGTCATCGATGATGTTGACCCCCACTATCTAAAGCACTTTAAGGAATTCATGGGGGCCCAACGGGATTGGCAAAGCAACACCAAGTACGGCAAGCCCATTCAAATTAAAGGGGGCATTCCGACAATCTTCCTATGCAATCCTGGGACCGACATCATCATATAA |
|
Protein Sequence
|
MPRPRSFQIKAKNIFLTYPKCPIPKEEALELIKAIHCPSDKLFIRVAQEKHSDGTLHLHALIQFKGKAQFRNPRHFDITHPNTSSQFHPNFQGAKSSSDVKSYIEKDGDYVDWGVFQVDGRSARGGQQTANDAAAEALNAGSKEAALSIIREKLPKEYIFQFHNLNSNLDRIFAPPAEVFVSPFLASSFDQVPEELECWAEENVRDAAARPWRPVSIVVEGESRTGKTMWARSLGPHNYLCGHLDLSPKIYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGTDIII |
|
NCBI Accession
|
YP_271823.1
|
|
Location
|
2204-2461 |
|
Gene Name
|
ac4 |
|
Protein Name
|
AC4 protein |
|
Coding Region
|
ATGGGACACTGCATCTCCATGCCCTCATCCAATTCAAAGGTAAAGCCCAATTCAGGAACCCCAGGCATTTTGACATTACGCATCCCAACACCTCCTCACAATTCCATCCGAACTTCCAAGGAGCCAAGTCCAGTTCTGATGTCAAGTCCTATATCGAGAAGGACGGTGATTACGTCGACTGGGGTGTTTTTCAAGTCGACGGAAGATCTGCTAGAGGAGGTCAGCAGACGGCTAATGATGCAGCAGCAGAAGCGCTGA |
|
Protein Sequence
|
MGHCISMPSSNSKVKPNSGTPGILTLRIPTPPHNSIRTSKEPSPVLMSSPISRRTVITSTGVFFKSTEDLLEEVSRRLMMQQQKR |