Ludwigia yellow vein Vietnam virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_002822765.1
Isolate Viet Nam: Hochiminh
Release date 2018/8/25
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_038451
ACCGGATGGCCGCGCAAATTTTTCCCCCCTTTCACTTTAGTGGGTCCCCCGCACTATTTTTGGTCGGCCAATGAGAATACGCGCTCAAAGCTTAGATAACCGTGTGGTCCCGCCATAAATAACTTCCCCTCGAAGGTAAATTCAAAATGTGGGATCCGTTGGAGCACGAGTTTCCGGAAACTCTTCACGGTTTCCGTTGTATGCTCGCTATCAAATACCTGCAGACTGTAGCGGATACGTATGCTCCGGATACGGTAGGTTACGATCTTATTCGTGATTTAATTTCTATTGTACGAGCTGGCAACTATGTCGAAGCGACCCGCCGATATAGTCATTTCAACACCCGTCTCCAAAGTACGTCGCCGGTTGAACTTCGATTCCCCCGGAGTGAGCCGTGTTGCTGCCCGCACTGTCCTCGGCATAACCCGAAAGAATGCCTGGACGTACAGGCCCACGTATCGCAAGCCCAGACTGTACAGAATGTACAGAAGCCCTGATGTCCCTCGTGGTTGTGAGGGTCCATGTAAGGTTCAGTCGTTCGAGAAGAAACATGATGTTGGTCATACTGGTACATTATTATGTGTGTCCGATGTTACTCGTGGAAATGGGTTAACCCATCGCACTGGGAAGAGGTTCTGTATTAAGTCTATTTACATTCTGGGTAAGTTATGGATGGATGAGAACATCAAGACGAAGAATCACACGAACACAGTCATGTTCTGGTTAGTTAGGGATAGGCGTCCTGTCACAACGCCATATGGGTTCGGCGAGGCATTCAACATGTACGACAATGAGCCCAGTACAGCAACTATCAAGAACGATCTTCGTGACCGTCTGCAGGTGCTGCACAGGTTTCAAGCCACTCTCACAGGAGGTCAGTACGCGTGCAAGGAGCAGGTAATGGTGAAGAGGTTCTGGAAGATCAACAATCACGTCGTCTACAACCATCAGGAGAAGGCTGCTTACGAGAATCACACTGAGAACGCATTAATATTGTATATGGCATGTACTCATGCCTCTAACCCCGTGTATGCTACACTGAAGATCCGCATCTACTTCTATGATTCAGTCCAGAATTAATAAAGATTATATTTTATTATGTGTGTCAATTGAGCATCAATTGTGCCCTCCAGTACATCGTACAATACATGAGTTATAGCCCTAATTACATTGTTGATACTAATAATGCCTAAGTTATCTAAATACTTCATACATTGAACATTAAATACTCTTAAGAAACGCCCAGTCTGAGGACGTAAACGAGTCCAGATCTGGCAGATCAGGAAACACTGGTGCATCCCCAGTGCTTTCCTCAGGTTGTAGTTGAACTGGACTTGGATTGTTATTACGTCGTGATCCCTCAGGAATGGCCTCACCAGGTGCTTGGTAATCTTGAAATAGAGGGGATTTCTGACCGTCCAGGTATAGACGCCACTCTCTGCCTGAGTTGCAGTGATGTATTCCCCGGTGCGAAAATCCATGGTTGGCACAGGTAATTGGAAAGAAGTATGAGCAGCCGCACGGTAGATCAACTCTCCTCCGGCGTATTGACTTCTTCTTGGCTATTCTGTGCTGGACTTTGATGGGTACCTGAGTACAGTGGCTCTGAGAGGAAGACGAATTCTGCATTCTTCAGTGCCCAGGACTTTAGAGCTGAATTCTTATCCTCGTCCAGATACTCCTTATATGATGATGTTGGGCCAGGATTGCATAGAAAGATTGTCGGAATTCCCCCTTTAATTTGAATGGGCTTCCCGTACTTGGTATTGCTTTGCCAATCCCTCTGGGCCCCCATGAATTCCTTAAAGTGCTTTAGATAATGGGGGTCCACATCATCGATGACGTTATACCATGCGTCATTAGAGTAGATCTTGGGGCTCAAGTCTAGATGCCCACAAAGGTAATTATGTGGGCCCAATGATCTGGCCCACATTGTCTTCCCAGTTCTACTCTCTCCTTCTACCACTATACTCACCGGTCGCCAAGGCCGCGCAGCGGCATCCCTGACGTTCTCCTCCGCCCAACATTCAAGTTCTTCCGGAACTCGATCGAATGAAGAAGCTAAAAAAGGAGAAACAAAAACCTCTACTGGAGGTGCAAAAATCCTATCTAAATTAGCATTTAAATTATGAAATTGTAAAACAAAATCTTTAGGAGCTAACTCCTTAATTACATTAAGAGCCTCTGACTTACTGCCGCTGTTAAGCGCCTGGGCGTAAGCGTCATTGGCTGTCTGTTGTCCCCCTCTTGCAGATCGTCCGTCGATCTGAAACTCTCCCCAATCGAGGGTGTCTCCGTCCTTCTCCAGGTAGGACTTGACATCTGAACTCGATTTAGCCCCCTGTAAGTTCGGATGGAAATGTGCGCTCCTACTTGGGGATACCAGGTCGAAGAATCGTGGATTCGTGCAGTTGTACTTCCCTTCGAACTGCACGAGCACATGGAGATGAGGGCTCCCATCTTCGTGAAGCTCTCTGCAGATCTTGATGTATTTCTTGTTGGTCGGAGTGTTTAGGGCTTGCAATTGGGAAAGTGCTTCTTCTTTGGAGAGAGAGCAGTGTGGATAAGTGAGGAAATAGTTCTTGGCTTTAATAGAAAATCTGCCGGCTCTTGGCATTTTGGAATCGGGGGGCACTCAAAGTCCTGTGCAATTGGGGGAACGGGGGGACAATTTATATGTGCCCCCCTAATGGCATTCTTGAAATTTCCTTTGCAATTTCAAATTCCAAAAGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession YP_009506431.1
Location 147-497
Gene Name AV2
Protein Name AV2 protein
Coding Region ATGTGGGATCCGTTGGAGCACGAGTTTCCGGAAACTCTTCACGGTTTCCGTTGTATGCTCGCTATCAAATACCTGCAGACTGTAGCGGATACGTATGCTCCGGATACGGTAGGTTACGATCTTATTCGTGATTTAATTTCTATTGTACGAGCTGGCAACTATGTCGAAGCGACCCGCCGATATAGTCATTTCAACACCCGTCTCCAAAGTACGTCGCCGGTTGAACTTCGATTCCCCCGGAGTGAGCCGTGTTGCTGCCCGCACTGTCCTCGGCATAACCCGAAAGAATGCCTGGACGTACAGGCCCACGTATCGCAAGCCCAGACTGTACAGAATGTACAGAAGCCCTGA
Protein Sequence MWDPLEHEFPETLHGFRCMLAIKYLQTVADTYAPDTVGYDLIRDLISIVRAGNYVEATRRYSHFNTRLQSTSPVELRFPRSEPCCCPHCPRHNPKECLDVQAHVSQAQTVQNVQKP

NCBI Accession YP_009506432.1
Location 307-1080
Gene Name AV1
Protein Name CP protein
Coding Region ATGTCGAAGCGACCCGCCGATATAGTCATTTCAACACCCGTCTCCAAAGTACGTCGCCGGTTGAACTTCGATTCCCCCGGAGTGAGCCGTGTTGCTGCCCGCACTGTCCTCGGCATAACCCGAAAGAATGCCTGGACGTACAGGCCCACGTATCGCAAGCCCAGACTGTACAGAATGTACAGAAGCCCTGATGTCCCTCGTGGTTGTGAGGGTCCATGTAAGGTTCAGTCGTTCGAGAAGAAACATGATGTTGGTCATACTGGTACATTATTATGTGTGTCCGATGTTACTCGTGGAAATGGGTTAACCCATCGCACTGGGAAGAGGTTCTGTATTAAGTCTATTTACATTCTGGGTAAGTTATGGATGGATGAGAACATCAAGACGAAGAATCACACGAACACAGTCATGTTCTGGTTAGTTAGGGATAGGCGTCCTGTCACAACGCCATATGGGTTCGGCGAGGCATTCAACATGTACGACAATGAGCCCAGTACAGCAACTATCAAGAACGATCTTCGTGACCGTCTGCAGGTGCTGCACAGGTTTCAAGCCACTCTCACAGGAGGTCAGTACGCGTGCAAGGAGCAGGTAATGGTGAAGAGGTTCTGGAAGATCAACAATCACGTCGTCTACAACCATCAGGAGAAGGCTGCTTACGAGAATCACACTGAGAACGCATTAATATTGTATATGGCATGTACTCATGCCTCTAACCCCGTGTATGCTACACTGAAGATCCGCATCTACTTCTATGATTCAGTCCAGAATTAA
Protein Sequence MSKRPADIVISTPVSKVRRRLNFDSPGVSRVAARTVLGITRKNAWTYRPTYRKPRLYRMYRSPDVPRGCEGPCKVQSFEKKHDVGHTGTLLCVSDVTRGNGLTHRTGKRFCIKSIYILGKLWMDENIKTKNHTNTVMFWLVRDRRPVTTPYGFGEAFNMYDNEPSTATIKNDLRDRLQVLHRFQATLTGGQYACKEQVMVKRFWKINNHVVYNHQEKAAYENHTENALILYMACTHASNPVYATLKIRIYFYDSVQN

NCBI Accession YP_009506433.1
Location 1077-1481
Gene Name AC3
Protein Name REn protein
Coding Region ATGGATTTTCGCACCGGGGAATACATCACTGCAACTCAGGCAGAGAGTGGCGTCTATACCTGGACGGTCAGAAATCCCCTCTATTTCAAGATTACCAAGCACCTGGTGAGGCCATTCCTGAGGGATCACGACGTAATAACAATCCAAGTCCAGTTCAACTACAACCTGAGGAAAGCACTGGGGATGCACCAGTGTTTCCTGATCTGCCAGATCTGGACTCGTTTACGTCCTCAGACTGGGCGTTTCTTAAGAGTATTTAATGTTCAATGTATGAAGTATTTAGATAACTTAGGCATTATTAGTATCAACAATGTAATTAGGGCTATAACTCATGTATTGTACGATGTACTGGAGGGCACAATTGATGCTCAATTGACACACATAATAAAATATAATCTTTATTAA
Protein Sequence MDFRTGEYITATQAESGVYTWTVRNPLYFKITKHLVRPFLRDHDVITIQVQFNYNLRKALGMHQCFLICQIWTRLRPQTGRFLRVFNVQCMKYLDNLGIISINNVIRAITHVLYDVLEGTIDAQLTHIIKYNLY

NCBI Accession YP_009506434.1
Location 1222-1629
Gene Name AC2
Protein Name TrAP protein
Coding Region ATGCAGAATTCGTCTTCCTCTCAGAGCCACTGTACTCAGGTACCCATCAAAGTCCAGCACAGAATAGCCAAGAAGAAGTCAATACGCCGGAGGAGAGTTGATCTACCGTGCGGCTGCTCATACTTCTTTCCAATTACCTGTGCCAACCATGGATTTTCGCACCGGGGAATACATCACTGCAACTCAGGCAGAGAGTGGCGTCTATACCTGGACGGTCAGAAATCCCCTCTATTTCAAGATTACCAAGCACCTGGTGAGGCCATTCCTGAGGGATCACGACGTAATAACAATCCAAGTCCAGTTCAACTACAACCTGAGGAAAGCACTGGGGATGCACCAGTGTTTCCTGATCTGCCAGATCTGGACTCGTTTACGTCCTCAGACTGGGCGTTTCTTAAGAGTATTTAA
Protein Sequence MQNSSSSQSHCTQVPIKVQHRIAKKKSIRRRRVDLPCGCSYFFPITCANHGFSHRGIHHCNSGREWRLYLDGQKSPLFQDYQAPGEAIPEGSRRNNNPSPVQLQPEESTGDAPVFPDLPDLDSFTSSDWAFLKSI

NCBI Accession YP_009506435.1
Location 1529-2617
Gene Name AC1
Protein Name rep protein
Coding Region ATGCCAAGAGCCGGCAGATTTTCTATTAAAGCCAAGAACTATTTCCTCACTTATCCACACTGCTCTCTCTCCAAAGAAGAAGCACTTTCCCAATTGCAAGCCCTAAACACTCCGACCAACAAGAAATACATCAAGATCTGCAGAGAGCTTCACGAAGATGGGAGCCCTCATCTCCATGTGCTCGTGCAGTTCGAAGGGAAGTACAACTGCACGAATCCACGATTCTTCGACCTGGTATCCCCAAGTAGGAGCGCACATTTCCATCCGAACTTACAGGGGGCTAAATCGAGTTCAGATGTCAAGTCCTACCTGGAGAAGGACGGAGACACCCTCGATTGGGGAGAGTTTCAGATCGACGGACGATCTGCAAGAGGGGGACAACAGACAGCCAATGACGCTTACGCCCAGGCGCTTAACAGCGGCAGTAAGTCAGAGGCTCTTAATGTAATTAAGGAGTTAGCTCCTAAAGATTTTGTTTTACAATTTCATAATTTAAATGCTAATTTAGATAGGATTTTTGCACCTCCAGTAGAGGTTTTTGTTTCTCCTTTTTTAGCTTCTTCATTCGATCGAGTTCCGGAAGAACTTGAATGTTGGGCGGAGGAGAACGTCAGGGATGCCGCTGCGCGGCCTTGGCGACCGGTGAGTATAGTGGTAGAAGGAGAGAGTAGAACTGGGAAGACAATGTGGGCCAGATCATTGGGCCCACATAATTACCTTTGTGGGCATCTAGACTTGAGCCCCAAGATCTACTCTAATGACGCATGGTATAACGTCATCGATGATGTGGACCCCCATTATCTAAAGCACTTTAAGGAATTCATGGGGGCCCAGAGGGATTGGCAAAGCAATACCAAGTACGGGAAGCCCATTCAAATTAAAGGGGGAATTCCGACAATCTTTCTATGCAATCCTGGCCCAACATCATCATATAAGGAGTATCTGGACGAGGATAAGAATTCAGCTCTAAAGTCCTGGGCACTGAAGAATGCAGAATTCGTCTTCCTCTCAGAGCCACTGTACTCAGGTACCCATCAAAGTCCAGCACAGAATAGCCAAGAAGAAGTCAATACGCCGGAGGAGAGTTGA
Protein Sequence MPRAGRFSIKAKNYFLTYPHCSLSKEEALSQLQALNTPTNKKYIKICRELHEDGSPHLHVLVQFEGKYNCTNPRFFDLVSPSRSAHFHPNLQGAKSSSDVKSYLEKDGDTLDWGEFQIDGRSARGGQQTANDAYAQALNSGSKSEALNVIKELAPKDFVLQFHNLNANLDRIFAPPVEVFVSPFLASSFDRVPEELECWAEENVRDAAARPWRPVSIVVEGESRTGKTMWARSLGPHNYLCGHLDLSPKIYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEDKNSALKSWALKNAEFVFLSEPLYSGTHQSPAQNSQEEVNTPEES

NCBI Accession YP_009506436.1
Location 2170-2460
Gene Name AC4
Protein Name AC4 protein
Coding Region ATGGGAGCCCTCATCTCCATGTGCTCGTGCAGTTCGAAGGGAAGTACAACTGCACGAATCCACGATTCTTCGACCTGGTATCCCCAAGTAGGAGCGCACATTTCCATCCGAACTTACAGGGGGCTAAATCGAGTTCAGATGTCAAGTCCTACCTGGAGAAGGACGGAGACACCCTCGATTGGGGAGAGTTTCAGATCGACGGACGATCTGCAAGAGGGGGACAACAGACAGCCAATGACGCTTACGCCCAGGCGCTTAACAGCGGCAGTAAGTCAGAGGCTCTTAATGTAA
Protein Sequence MGALISMCSCSSKGSTTARIHDSSTWYPQVGAHISIRTYRGLNRVQMSSPTWRRTETPSIGESFRSTDDLQEGDNRQPMTLTPRRLTAAVSQRLLM