Jatropha yellow mosaic virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_000881575.2
Isolate India: Kathaupahadi, Tikamgarh, Madhya Pradesh
Release date 2017/10/11
Submitter Snehi,S.K., Raj,S.K., Khan,M.S., Prasad,V., Kumar,S.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_011309
ACCGGATGGCCGCGATTTTTTTTTTGGGCCCCTTAACGCATTAACTGACAAGGATAGGGGACCCCATCCCAAGGCGCGGTTAAAGGTTAAATGTTTTGTGGTCCCCCCTATAAACTTAGTCACCAAGTATTTATTCTCCAATATGTGGGATCCATTGTTGAATGAGTTTCCTGAAACCGTTCACGGTTTTAGGTGTATGCTAGCAGTTAAATATTTGCAATTAGTAGAAAAGACCTATTCCCCAGATACTCTGGGGTACGATTTAATTAGGGATTTGATTTCAGTAATAAGGGCTAGGAATTATGTCGAAGCGACCAGCAGATATAATCATTTCCACGCCCGCCTCGAAGGTACGCCGCCGTCTCAACTTCGACAGCTCATATGCGAGCCGTGTTGCTGCCCCCATTGTCCGCGTCAACAAAGCAAAAGCATGGGTGAACAGGCCGATGAACAGAAAGCCCAGGATGTACAGGCTGTTCAGAAGTCCGGATGTTCCTAAAGGATGTGAAGGCCCATGTAAGGTCCAGTCGTTTGAATCTAGACACGATGTAGTCCATATAGGGAAGGTCATGTGTATTAGTGATGTCACTCGCGGTACTGGGCTGACCCATAGAGTTGGTAAGCGTTTTTGTGTTAAGTCTGTTTACGTTTTGGGTAAAATATGGATGGATGAGAATATCAAGACCAGGAATCACACGAACAGTGTCCTGTTCTTTCTTGTTCGTGACCGTCGCCCTGTTGATAAGCCACAGGACTTTGGAGAGGTGTTCAATATGTTCGACAACGAGCCTAGCACTGCTACTGTTAAGAATATGCACAGAGATCGTTATCAGGTGTTGAGGAAGTGGCACGCAACTGTCACCGGTGGACAATACGCTTCAAAAGAACAGGCATTAGTGAAGAAGTTTATTAGGGTTAATAATTATGTTGTGTACAACCAGCAAGAGGCTGGGAAGTATGAGAATCATACGGAGAATGCGTTGATGTTGTATATGGCGTGTACGCACGCCTCTAACCCTGTGTATGCTACGATGAAGATACGGATCTATTTCTATGATTCAGTATCGAATTAATAAAGACGAAATATTATTTCATTGCTTTGTTCAACATTTGCATCGTGATGCAGTACATTATACAATACATGATCTACAGCTCTAATTACAAGATTAATAGAAATTACACCTAATCTATCTAAATATCTAATAACTTGAGTCTTAAAGACTCGTAAGAAACTCCCAGTCGGAATCCGTGAACGAGTCCAGACTTTGAAGCTCAGGAAGCACTTGTGTATCTGTAGTGCTTGCCTGAGATTGTGATTGAATTGTATTTGGATGTGTATGATGTCCTGTTCCAGGTGGAAGGGCCTGCTCATGTGCACTGGGACGCGGAAGTATAGGGGATTTGGGACCGTCCAGATAAAGACGCCATTGTTGAAACGAGCTGCAGTGATGGGTTCCCCTGTGCGTGAATCCATGATTCGCGCAGGTTAATGACAGAAAATATGAACATCCGCACTTCAGATCAACTCCTCGCCGGATGGACCTCTTCTTCGCTATCCTGTGTTGGACCTTGATAGGTACCTGAGTATAGAGGTTCTGAGAGGAAGACGAACAAGACATTCTTAACCGCCCAGTTCTTTAATGCTGCGTTCCTATCTTCGTCTAAATACTCTTTATAGCTGGAAGTTGGCCCAGGATTGCAGAGGAAGATTGTCGGAATGCCCCCTTTAATTTGAACGGGCTTTCCATACTTGGTGTTACTTTGCCAGTCTCTCTGGGCCCCCATAAATTCCTTGAAGTGCTTTAGATAATGCGGATCAACATCATCAATGACGTTATACCATACGTCATTACTATAGACTCTTGGACTGAGATCCAAGTGACCGCATAAATAGTTGTGTGAACCCAATGACCTGGCCCACATTGTTTTCCCCGTCCTACTATTACCCTCTATGACTATACTCATGGGTCTCAAAGGCCGCGCAGCGGCATCCACCACATTCTCGGCAGCCCATTCCTCAAGTTCTGCCGGAACTTGATCGAAAGAAGAAGAAGAAAAAGGAGAAACATACTCCACAGGAGGCTCCTGTAAAAATCTATCTAAATTAGATTTTAAATTGTGAAATTGAAAAATATAATCTTTAGGAGACTTATTCTTTAATATATTGAGGGCCTCAATTTTTGACCCTGCGTTAATCGCTGTGGCGTAAGCGTCATTGGCTGATTGTTGTCCTCCTCGTGCAGATCTTCCATCGATCTGAAACTCTCCCCAGTCGATGGTGTCTCCGTCCTTCTCCATATAGGACTTGACGTCGCTGGAGCTTTTAGCTCCCTGGATGTTTGGATGGAATTGTGCTGACCTGGTTGGGGAGACCAGATCAAAGAATCGCTGATGTTGGCACTTGTATTTTCCTTCGAACTGGATAAGAACATGTAAGTGGGGTTCCCCATTTTCGTGAAGCTCTCTGCAGATTCTAATGAATTTTTTAGAAGTTGGTGTTTGGAGATTTAAGAATTGGGAAAGTGCTTCTTCTTTAGTGAGGGAGCACTTGGGATAAGTGAGAAAATAATTTTTTGCATTTAATTTAAACCGATTTGGGGCTGCCATGTTGACTTAGTCAATCGGTGTCTCTCAATTTGTTCTATGTATCGGTGTACTGGAGTCCTATATATATGGAGACTCTAATGGCATAATTGTAATAATAGAACTTTAATTTGAAATCCTCAAAATAAAATAAACGGCCATCCGTATAATATT

Gene Information

NCBI Accession YP_002261479.2
Location 143-499
Protein Name AV2
Coding Region ATGTGGGATCCATTGTTGAATGAGTTTCCTGAAACCGTTCACGGTTTTAGGTGTATGCTAGCAGTTAAATATTTGCAATTAGTAGAAAAGACCTATTCCCCAGATACTCTGGGGTACGATTTAATTAGGGATTTGATTTCAGTAATAAGGGCTAGGAATTATGTCGAAGCGACCAGCAGATATAATCATTTCCACGCCCGCCTCGAAGGTACGCCGCCGTCTCAACTTCGACAGCTCATATGCGAGCCGTGTTGCTGCCCCCATTGTCCGCGTCAACAAAGCAAAAGCATGGGTGAACAGGCCGATGAACAGAAAGCCCAGGATGTACAGGCTGTTCAGAAGTCCGGATGTTCCTAA
Protein Sequence MWDPLLNEFPETVHGFRCMLAVKYLQLVEKTYSPDTLGYDLIRDLISVIRARNYVEATSRYNHFHARLEGTPPSQLRQLICEPCCCPHCPRQQSKSMGEQADEQKAQDVQAVQKSGCS

NCBI Accession YP_002261480.1
Location 303-1073
Protein Name AV1
Coding Region ATGTCGAAGCGACCAGCAGATATAATCATTTCCACGCCCGCCTCGAAGGTACGCCGCCGTCTCAACTTCGACAGCTCATATGCGAGCCGTGTTGCTGCCCCCATTGTCCGCGTCAACAAAGCAAAAGCATGGGTGAACAGGCCGATGAACAGAAAGCCCAGGATGTACAGGCTGTTCAGAAGTCCGGATGTTCCTAAAGGATGTGAAGGCCCATGTAAGGTCCAGTCGTTTGAATCTAGACACGATGTAGTCCATATAGGGAAGGTCATGTGTATTAGTGATGTCACTCGCGGTACTGGGCTGACCCATAGAGTTGGTAAGCGTTTTTGTGTTAAGTCTGTTTACGTTTTGGGTAAAATATGGATGGATGAGAATATCAAGACCAGGAATCACACGAACAGTGTCCTGTTCTTTCTTGTTCGTGACCGTCGCCCTGTTGATAAGCCACAGGACTTTGGAGAGGTGTTCAATATGTTCGACAACGAGCCTAGCACTGCTACTGTTAAGAATATGCACAGAGATCGTTATCAGGTGTTGAGGAAGTGGCACGCAACTGTCACCGGTGGACAATACGCTTCAAAAGAACAGGCATTAGTGAAGAAGTTTATTAGGGTTAATAATTATGTTGTGTACAACCAGCAAGAGGCTGGGAAGTATGAGAATCATACGGAGAATGCGTTGATGTTGTATATGGCGTGTACGCACGCCTCTAACCCTGTGTATGCTACGATGAAGATACGGATCTATTTCTATGATTCAGTATCGAATTAA
Protein Sequence MSKRPADIIISTPASKVRRRLNFDSSYASRVAAPIVRVNKAKAWVNRPMNRKPRMYRLFRSPDVPKGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGTGLTHRVGKRFCVKSVYVLGKIWMDENIKTRNHTNSVLFFLVRDRRPVDKPQDFGEVFNMFDNEPSTATVKNMHRDRYQVLRKWHATVTGGQYASKEQALVKKFIRVNNYVVYNQQEAGKYENHTENALMLYMACTHASNPVYATMKIRIYFYDSVSN

NCBI Accession YP_002261481.2
Location 1070-1474
Protein Name AC3
Coding Region ATGGATTCACGCACAGGGGAACCCATCACTGCAGCTCGTTTCAACAATGGCGTCTTTATCTGGACGGTCCCAAATCCCCTATACTTCCGCGTCCCAGTGCACATGAGCAGGCCCTTCCACCTGGAACAGGACATCATACACATCCAAATACAATTCAATCACAATCTCAGGCAAGCACTACAGATACACAAGTGCTTCCTGAGCTTCAAAGTCTGGACTCGTTCACGGATTCCGACTGGGAGTTTCTTACGAGTCTTTAAGACTCAAGTTATTAGATATTTAGATAGATTAGGTGTAATTTCTATTAATCTTGTAATTAGAGCTGTAGATCATGTATTGTATAATGTACTGCATCACGATGCAAATGTTGAACAAAGCAATGAAATAATATTTCGTCTTTATTAA
Protein Sequence MDSRTGEPITAARFNNGVFIWTVPNPLYFRVPVHMSRPFHLEQDIIHIQIQFNHNLRQALQIHKCFLSFKVWTRSRIPTGSFLRVFKTQVIRYLDRLGVISINLVIRAVDHVLYNVLHHDANVEQSNEIIFRLY

NCBI Accession YP_002261482.2
Location 1215-1619
Protein Name AC2
Coding Region ATGTCTTGTTCGTCTTCCTCTCAGAACCTCTATACTCAGGTACCTATCAAGGTCCAACACAGGATAGCGAAGAAGAGGTCCATCCGGCGAGGAGTTGATCTGAAGTGCGGATGTTCATATTTTCTGTCATTAACCTGCGCGAATCATGGATTCACGCACAGGGGAACCCATCACTGCAGCTCGTTTCAACAATGGCGTCTTTATCTGGACGGTCCCAAATCCCCTATACTTCCGCGTCCCAGTGCACATGAGCAGGCCCTTCCACCTGGAACAGGACATCATACACATCCAAATACAATTCAATCACAATCTCAGGCAAGCACTACAGATACACAAGTGCTTCCTGAGCTTCAAAGTCTGGACTCGTTCACGGATTCCGACTGGGAGTTTCTTACGAGTCTTTAA
Protein Sequence MSCSSSSQNLYTQVPIKVQHRIAKKRSIRRGVDLKCGCSYFLSLTCANHGFTHRGTHHCSSFQQWRLYLDGPKSPILPRPSAHEQALPPGTGHHTHPNTIQSQSQASTTDTQVLPELQSLDSFTDSDWEFLTSL

NCBI Accession YP_002261483.2
Location 1522-2607
Protein Name AC1
Coding Region ATGGCAGCCCCAAATCGGTTTAAATTAAATGCAAAAAATTATTTTCTCACTTATCCCAAGTGCTCCCTCACTAAAGAAGAAGCACTTTCCCAATTCTTAAATCTCCAAACACCAACTTCTAAAAAATTCATTAGAATCTGCAGAGAGCTTCACGAAAATGGGGAACCCCACTTACATGTTCTTATCCAGTTCGAAGGAAAATACAAGTGCCAACATCAGCGATTCTTTGATCTGGTCTCCCCAACCAGGTCAGCACAATTCCATCCAAACATCCAGGGAGCTAAAAGCTCCAGCGACGTCAAGTCCTATATGGAGAAGGACGGAGACACCATCGACTGGGGAGAGTTTCAGATCGATGGAAGATCTGCACGAGGAGGACAACAATCAGCCAATGACGCTTACGCCACAGCGATTAACGCAGGGTCAAAAATTGAGGCCCTCAATATATTAAAGAATAAGTCTCCTAAAGATTATATTTTTCAATTTCACAATTTAAAATCTAATTTAGATAGATTTTTACAGGAGCCTCCTGTGGAGTATGTTTCTCCTTTTTCTTCTTCTTCTTTCGATCAAGTTCCGGCAGAACTTGAGGAATGGGCTGCCGAGAATGTGGTGGATGCCGCTGCGCGGCCTTTGAGACCCATGAGTATAGTCATAGAGGGTAATAGTAGGACGGGGAAAACAATGTGGGCCAGGTCATTGGGTTCACACAACTATTTATGCGGTCACTTGGATCTCAGTCCAAGAGTCTATAGTAATGACGTATGGTATAACGTCATTGATGATGTTGATCCGCATTATCTAAAGCACTTCAAGGAATTTATGGGGGCCCAGAGAGACTGGCAAAGTAACACCAAGTATGGAAAGCCCGTTCAAATTAAAGGGGGCATTCCGACAATCTTCCTCTGCAATCCTGGGCCAACTTCCAGCTATAAAGAGTATTTAGACGAAGATAGGAACGCAGCATTAAAGAACTGGGCGGTTAAGAATGTCTTGTTCGTCTTCCTCTCAGAACCTCTATACTCAGGTACCTATCAAGGTCCAACACAGGATAGCGAAGAAGAGGTCCATCCGGCGAGGAGTTGA
Protein Sequence MAAPNRFKLNAKNYFLTYPKCSLTKEEALSQFLNLQTPTSKKFIRICRELHENGEPHLHVLIQFEGKYKCQHQRFFDLVSPTRSAQFHPNIQGAKSSSDVKSYMEKDGDTIDWGEFQIDGRSARGGQQSANDAYATAINAGSKIEALNILKNKSPKDYIFQFHNLKSNLDRFLQEPPVEYVSPFSSSSFDQVPAELEEWAAENVVDAAARPLRPMSIVIEGNSRTGKTMWARSLGSHNYLCGHLDLSPRVYSNDVWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPTSSYKEYLDEDRNAALKNWAVKNVLFVFLSEPLYSGTYQGPTQDSEEEVHPARS

NCBI Accession YP_002261484.2
Location 2157-2450
Protein Name AC4
Coding Region ATGGGGAACCCCACTTACATGTTCTTATCCAGTTCGAAGGAAAATACAAGTGCCAACATCAGCGATTCTTTGATCTGGTCTCCCCAACCAGGTCAGCACAATTCCATCCAAACATCCAGGGAGCTAAAAGCTCCAGCGACGTCAAGTCCTATATGGAGAAGGACGGAGACACCATCGACTGGGGAGAGTTTCAGATCGATGGAAGATCTGCACGAGGAGGACAACAATCAGCCAATGACGCTTACGCCACAGCGATTAACGCAGGGTCAAAAATTGAGGCCCTCAATATATTAA
Protein Sequence MGNPTYMFLSSSKENTSANISDSLIWSPQPGQHNSIQTSRELKAPATSSPIWRRTETPSTGESFRSMEDLHEEDNNQPMTLTPQRLTQGQKLRPSIY