Jatropha leaf curl virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_000880535.1
Isolate India
Release date 2015/2/22
Submitter Pal,A., Mukherjee,S.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_011268
ACCGGATGGCCGCGATTTTTTTTAACGTGGACCCCACAACTGACAAACAGACAAAGAAAAGAAAAGGGAACCCAGCACAAAGAGAAAAAAACTAACGTCCCGCGCGCTATAAAACTTGCTGGCGAAGGAGTAGAGCCGCAACATGTGGGATCCATTAACCAACGAGTTTCCCGAAACCCTGCACGGGTTTCGCTGTATGCTTGCAGTCAAATATCTACAAGCTCTACTCTCTTCGTACGCTCCTGATACGGTCGGATACGAGTACCTTCGTGATCTGATCAGCGTACTACGCTGTCGCGACTATGGCAAAGCGTCTATTCGATATGGTCGGATCGTCGCCGCTAAGAATAACACGCCGGAAACTGAACTTCGGGAGTCCCTCCCGTCTCATTGCCAGTGCCGTCACTGCCCCAGACATGGGATTCAAAAGGAGGGCGTGGACGTGGCGACCAGCAAACCGAAAACCGTGGATATACCGGAGAAGGAGAGCTCCTGATGTGCCGCGTGGATGCGAGGGACCATGCAAAGTACAGTCATTCGAAAAGAGACATGATGTCACGCACACGGGGGGCGTTCTATGTATATCTGACGTCACACGCGGCAATGGTATCACGCATAGAGTGGGTAAGAGATTCTGCGTGAAATCCGTCTATGTACTTGGCAAGATTTGGATGGACGAGAACATCAAGACGAAGAACCATACTAACAGCGTGATATTCTGGCTGGTCAGAGACAGGCGTCCATTTGGCAGTCCAATGGACCTGGGCCAAGTCTTTAACATGTATGATAACGAGCCCAGTACAGCCACTATCAAGAACGATTTGAGGGATAGATATCAAGTGTTACACAAATGGCACGCGTCGGTTACTGGTGGTGTCTATGCGTCTAAGGAACAAGCTATAATCAAGAAGTTCTACAGAGTCAATAATTATGTGGTCTACAATCACCAGGAAGCCGCGAAATACGAAAACCATACTGAGAATGCGTTATTATTGTACATGGCATGTACGCATGCATCAAATCCAGTGTATGCAACATTGAAAATACGCATATATTTCTACGACTCAGTATCAAATTAATTAAACATTATTTCATTGCTCTGTTCAACCTGCATCGTATGATGCAGTACATTATACAATACATGATCTACAGCTTTAATTACAAGATTAATAGAAATTACACCTAATCTATCTAAATATCTAATAACTTGAGTCTTAAAGACTCGTAAGAACATCCCAGTCTGAATCCGTGAACGAGTCCAGACTTTGAAGCTCAGGAAGCACTTGTGTATCTGTAGTGCTTGCCTGAGATTGTGATTGAATTGTATTCGGAGGTGTATGATGTCCTGGTCCAGGTTGAAGGGTCTGCTCATGTGACTGATGACGCGGAAGTACAGAGGATTTGGGACCGTCCAGATAAAGACGCCATTGTTGAAACGAGCTGCAGTGATGGGTTCCCCTGTGCGTGAATCCATGATTCGCGCAGTTAGCGAGAGAAAATATGAACATCCGCACTTCAAGTCGATCCTCCTCCGCCTTATCCCCCCCTGATCTGTCGCCTCTGGCGTCTCTTGAAAGGAGCTGGAGGGGGACTGTCGCTGTCGAACACGACATTCTTAACAGCCCAGTTCTTTAATGCTGCGTTCCTATCTTCGTCTAAATACTCTTTATAGCTCGAATGGGGCCCAGGATTGCAGAGGAAGATTGTCGGAATGCCTCCTTTAACTTGAACGGGCTTTCCATACTTTGTGTTGCTTTGCCAGTCTCTCTGGGCCCCCATAAATTCCTTGAAGTGCTTGAGATAATGCGGATCAACATCATCAATGACGTTATACCATACGTCATTACTATAGACTCTTGGACTGAGATCCAAGTGACCGCATAAATAATTGTGTGGGCCGAGAGACCGAGCCCACATTGTCTTCCCAATACGACTATCACCCTCTAAAACAATACTTATGGGTCTAAAAGGCCGCGCAGCGGGACTGACAATATTTTCTGAGGCCCAAATCTCGAGTTCTTCTGGAACTCGATCAAACGAACAAAGAGGATAAGGAGAAACATAATCTACTCTAAGAGGTGTAAATATCTCCCTCTCTAGATTGGACTTTAAATTATGATACTGAAAAATATAATCTCTGGGCATCTTCACGGATATAGCTAGAGCAGCTTCTGCAGACCCAGAGTTTAAGGCCTCCGCTGCAGCATCATTAGCTGTCTGTTGACCTCCTCTAGCAGATCTTCCATCGATCTGAAAGAACCCCCAGTCGATGAAATCTCCGTCCTTCTCGATATAGGACTTAACATCAGAGGAGGACTTAGCTCCCTGGATATTTGGATGGAATTGGGAGGAGCTATGAGGATGGATGAGATCGAAATGTCTTGCATTTCTGAATCTGGCCTTACCCTTGAACTGGATAAGGGCATGGATATGCAGTGACCCATCCTCGTGTTTCTCCTGCGCGACTCTAATAAATAATTTATCAGAAGGACAGGATATGTTTCGCAGGAGATCCAAGACTGTCTCCTTGGATAATGGGCATTTGGGATAAGTGAGGAATATGTTTTTAGCGCTAACTGAAAATGCGTTAACACGAGGCATTTTAAACAGAGGGTATTGGGGACGCTGTAAAACTCTCTACAATTGGGGACTTGGGGGACGCATTTATACCAGTGTCCCCAAATGGCACGCTTGTAATTTTTGTGAAAATCCCCTGTCCAACAGCGGCCATCCGATTAATATT

Gene Information

NCBI Accession YP_002224028.1
Location 143-496
Protein Name precoat protein
Coding Region ATGTGGGATCCATTAACCAACGAGTTTCCCGAAACCCTGCACGGGTTTCGCTGTATGCTTGCAGTCAAATATCTACAAGCTCTACTCTCTTCGTACGCTCCTGATACGGTCGGATACGAGTACCTTCGTGATCTGATCAGCGTACTACGCTGTCGCGACTATGGCAAAGCGTCTATTCGATATGGTCGGATCGTCGCCGCTAAGAATAACACGCCGGAAACTGAACTTCGGGAGTCCCTCCCGTCTCATTGCCAGTGCCGTCACTGCCCCAGACATGGGATTCAAAAGGAGGGCGTGGACGTGGCGACCAGCAAACCGAAAACCGTGGATATACCGGAGAAGGAGAGCTCCTGA
Protein Sequence MWDPLTNEFPETLHGFRCMLAVKYLQALLSSYAPDTVGYEYLRDLISVLRCRDYGKASIRYGRIVAAKNNTPETELRESLPSHCQCRHCPRHGIQKEGVDVATSKPKTVDIPEKESS

NCBI Accession YP_002224029.1
Location 303-1079
Protein Name coat protein
Coding Region ATGGCAAAGCGTCTATTCGATATGGTCGGATCGTCGCCGCTAAGAATAACACGCCGGAAACTGAACTTCGGGAGTCCCTCCCGTCTCATTGCCAGTGCCGTCACTGCCCCAGACATGGGATTCAAAAGGAGGGCGTGGACGTGGCGACCAGCAAACCGAAAACCGTGGATATACCGGAGAAGGAGAGCTCCTGATGTGCCGCGTGGATGCGAGGGACCATGCAAAGTACAGTCATTCGAAAAGAGACATGATGTCACGCACACGGGGGGCGTTCTATGTATATCTGACGTCACACGCGGCAATGGTATCACGCATAGAGTGGGTAAGAGATTCTGCGTGAAATCCGTCTATGTACTTGGCAAGATTTGGATGGACGAGAACATCAAGACGAAGAACCATACTAACAGCGTGATATTCTGGCTGGTCAGAGACAGGCGTCCATTTGGCAGTCCAATGGACCTGGGCCAAGTCTTTAACATGTATGATAACGAGCCCAGTACAGCCACTATCAAGAACGATTTGAGGGATAGATATCAAGTGTTACACAAATGGCACGCGTCGGTTACTGGTGGTGTCTATGCGTCTAAGGAACAAGCTATAATCAAGAAGTTCTACAGAGTCAATAATTATGTGGTCTACAATCACCAGGAAGCCGCGAAATACGAAAACCATACTGAGAATGCGTTATTATTGTACATGGCATGTACGCATGCATCAAATCCAGTGTATGCAACATTGAAAATACGCATATATTTCTACGACTCAGTATCAAATTAA
Protein Sequence MAKRLFDMVGSSPLRITRRKLNFGSPSRLIASAVTAPDMGFKRRAWTWRPANRKPWIYRRRRAPDVPRGCEGPCKVQSFEKRHDVTHTGGVLCISDVTRGNGITHRVGKRFCVKSVYVLGKIWMDENIKTKNHTNSVIFWLVRDRRPFGSPMDLGQVFNMYDNEPSTATIKNDLRDRYQVLHKWHASVTGGVYASKEQAIIKKFYRVNNYVVYNHQEAAKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSVSN

NCBI Accession YP_002224030.1
Location 1076-1474
Protein Name AC3
Coding Region ATGGATTCACGCACAGGGGAACCCATCACTGCAGCTCGTTTCAACAATGGCGTCTTTATCTGGACGGTCCCAAATCCTCTGTACTTCCGCGTCATCAGTCACATGAGCAGACCCTTCAACCTGGACCAGGACATCATACACCTCCGAATACAATTCAATCACAATCTCAGGCAAGCACTACAGATACACAAGTGCTTCCTGAGCTTCAAAGTCTGGACTCGTTCACGGATTCAGACTGGGATGTTCTTACGAGTCTTTAAGACTCAAGTTATTAGATATTTAGATAGATTAGGTGTAATTTCTATTAATCTTGTAATTAAAGCTGTAGATCATGTATTGTATAATGTACTGCATCATACGATGCAGGTTGAACAGAGCAATGAAATAATGTTTAATTAA
Protein Sequence MDSRTGEPITAARFNNGVFIWTVPNPLYFRVISHMSRPFNLDQDIIHLRIQFNHNLRQALQIHKCFLSFKVWTRSRIQTGMFLRVFKTQVIRYLDRLGVISINLVIKAVDHVLYNVLHHTMQVEQSNEIMFN

NCBI Accession YP_002224031.1
Location 1215-1613
Protein Name AC2
Coding Region ATGTCGTGTTCGACAGCGACAGTCCCCCTCCAGCTCCTTTCAAGAGACGCCAGAGGCGACAGATCAGGGGGGGATAAGGCGGAGGAGGATCGACTTGAAGTGCGGATGTTCATATTTTCTCTCGCTAACTGCGCGAATCATGGATTCACGCACAGGGGAACCCATCACTGCAGCTCGTTTCAACAATGGCGTCTTTATCTGGACGGTCCCAAATCCTCTGTACTTCCGCGTCATCAGTCACATGAGCAGACCCTTCAACCTGGACCAGGACATCATACACCTCCGAATACAATTCAATCACAATCTCAGGCAAGCACTACAGATACACAAGTGCTTCCTGAGCTTCAAAGTCTGGACTCGTTCACGGATTCAGACTGGGATGTTCTTACGAGTCTTTAA
Protein Sequence MSCSTATVPLQLLSRDARGDRSGGDKAEEDRLEVRMFIFSLANCANHGFTHRGTHHCSSFQQWRLYLDGPKSSVLPRHQSHEQTLQPGPGHHTPPNTIQSQSQASTTDTQVLPELQSLDSFTDSDWDVLTSL

NCBI Accession YP_002224032.1
Location 1537-2601
Protein Name AC1
Coding Region ATGCCTCGTGTTAACGCATTTTCAGTTAGCGCTAAAAACATATTCCTCACTTATCCCAAATGCCCATTATCCAAGGAGACAGTCTTGGATCTCCTGCGAAACATATCCTGTCCTTCTGATAAATTATTTATTAGAGTCGCGCAGGAGAAACACGAGGATGGGTCACTGCATATCCATGCCCTTATCCAGTTCAAGGGTAAGGCCAGATTCAGAAATGCAAGACATTTCGATCTCATCCATCCTCATAGCTCCTCCCAATTCCATCCAAATATCCAGGGAGCTAAGTCCTCCTCTGATGTTAAGTCCTATATCGAGAAGGACGGAGATTTCATCGACTGGGGGTTCTTTCAGATCGATGGAAGATCTGCTAGAGGAGGTCAACAGACAGCTAATGATGCTGCAGCGGAGGCCTTAAACTCTGGGTCTGCAGAAGCTGCTCTAGCTATATCCGTGAAGATGCCCAGAGATTATATTTTTCAGTATCATAATTTAAAGTCCAATCTAGAGAGGGAGATATTTACACCTCTTAGAGTAGATTATGTTTCTCCTTATCCTCTTTGTTCGTTTGATCGAGTTCCAGAAGAACTCGAGATTTGGGCCTCAGAAAATATTGTCAGTCCCGCTGCGCGGCCTTTTAGACCCATAAGTATTGTTTTAGAGGGTGATAGTCGTATTGGGAAGACAATGTGGGCTCGGTCTCTCGGCCCACACAATTATTTATGCGGTCACTTGGATCTCAGTCCAAGAGTCTATAGTAATGACGTATGGTATAACGTCATTGATGATGTTGATCCGCATTATCTCAAGCACTTCAAGGAATTTATGGGGGCCCAGAGAGACTGGCAAAGCAACACAAAGTATGGAAAGCCCGTTCAAGTTAAAGGAGGCATTCCGACAATCTTCCTCTGCAATCCTGGGCCCCATTCGAGCTATAAAGAGTATTTAGACGAAGATAGGAACGCAGCATTAAAGAACTGGGCTGTTAAGAATGTCGTGTTCGACAGCGACAGTCCCCCTCCAGCTCCTTTCAAGAGACGCCAGAGGCGACAGATCAGGGGGGGATAA
Protein Sequence MPRVNAFSVSAKNIFLTYPKCPLSKETVLDLLRNISCPSDKLFIRVAQEKHEDGSLHIHALIQFKGKARFRNARHFDLIHPHSSSQFHPNIQGAKSSSDVKSYIEKDGDFIDWGFFQIDGRSARGGQQTANDAAAEALNSGSAEAALAISVKMPRDYIFQYHNLKSNLEREIFTPLRVDYVSPYPLCSFDRVPEELEIWASENIVSPAARPFRPISIVLEGDSRIGKTMWARSLGPHNYLCGHLDLSPRVYSNDVWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQVKGGIPTIFLCNPGPHSSYKEYLDEDRNAALKNWAVKNVVFDSDSPPPAPFKRRQRRQIRGG

NCBI Accession YP_002224033.1
Location 2187-2426
Protein Name AC4
Coding Region ATGCCCTTATCCAGTTCAAGGGTAAGGCCAGATTCAGAAATGCAAGACATTTCGATCTCATCCATCCTCATAGCTCCTCCCAATTCCATCCAAATATCCAGGGAGCTAAGTCCTCCTCTGATGTTAAGTCCTATATCGAGAAGGACGGAGATTTCATCGACTGGGGGTTCTTTCAGATCGATGGAAGATCTGCTAGAGGAGGTCAACAGACAGCTAATGATGCTGCAGCGGAGGCCTTAA
Protein Sequence MPLSSSRVRPDSEMQDISISSILIAPPNSIQISRELSPPLMLSPISRRTEISSTGGSFRSMEDLLEEVNRQLMMLQRRP