Jatropha leaf curl Gujarat virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_003029055.1
Isolate India
Release date 2018/8/26
Submitter Agarwal,P., More,P., Agarwal,P.K.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_038962
ACCGGATGGCCGCGCCCCGCTTTGTGGTGGGCCCCCCCACGTGGAGATGTCCCCCTATCAGAACACTCGCTGAAAGCTTTGATATTTGTGGTCCCCCTATAACAACTTGTCGCCCAAGTTGTTCATCTGCACAATGTGGGACCCTCTCCTCAACGAGTTCCCAGATTCCGTCCACGGTTTCCGGTGTATGCTTGCCGTGAAATACCTTCAGTTGGTGGAAGGTACCTATTCTCCTGACACTCTGGGTCACGAGTTAATCAGGGATCTCATATCTGTCATCAGGGCGAAGAATTATGCCGAAGCGACCAGCAGATATCATCATTTCCACACCAGGCTCGAAGGTTCGTCGCCGTCTGAACTTCGACAGCCCATATGCCAGCCGTGCAGCTGCCCCTACTGTCCGCGTCACAAGAAGTCAGGCCTGGACCAACAGGCCCATGAATCGCAAGCCCAAGTGGTACAGGATTTATAGAAGCCCAGATGTCCCTAAGGGCTGTGAAGGCCCATGTAAGGTCCAGTCCTTTGAGTCTAGACACGACGTCGTTCATATAGGTAAGGTCATGTGCATCTCAGATGTCACCCGTGGAACAGGGTTCACCCATCGCGTAGGTAAGAGGTTCTGCGTCAAGTCCGTGTACATCCTGGGCAAGATATGGATGGACGAAAACATCAAGACCAAGAACCACACGAACACTGTGATGTTCTTCCTCGTCAGGGATCGTAGGCCCGTGGACAAACCCCAGGATTTTGGTGAGGTGTTCAACATGTTCGATAACGAGCCCAGTACTGCTACGGTTAAAAACATGTACCGTGATCGGTACCAGGTGTTAAGGAAGTGGAGTTCCACTGTCACTGGTGGTCAGTATGCGAGCAAAGAGCAGGCAATAGTTAGGCGTTTTTTTAGGGTTAATAATTATGTTGTGTATAATCAGCAAGAGGCTGGTAAGTACGAAAACCATACGGAGAATGCATTGATGCTGTACATGGCGTGTACTCACGCCTCTAACCCCGTGTATGCTACGCTTAAGATACGGATCTACTTCTACGATTCAGTATCCAATTAATAAATTTTAAATTTTATTAAATTTGACTGCTCAACTGATTCAGTCCCTGTGAGTACACTGTACAATACATGCTCTACGGCTCTAACGACCGTATTTATACATATGACCCCTAACATGTCCAGGTATCTGAGTACCTGGTACCTAAAAACCCTCAAGAAACGCAAGGTCTGAGGCCGTAAGGTCGTCCAGATTTTGAAATCCATCCAGCATTGATGTAGTCCCAACGCTTTCCTCAGGTTGTGGTTGAACCGTATCTGGACGGTTATTATGTCGTGTTCCATCAGGAACGGCCGGCTGCTGTGGTCTATGATCTTGAAATAGAGGGGATTTGGAACCTCCCAGGTATAGACGCCATTCATCGCCTGAGCTGCAGTGATGAGTTCCCCTGTGCGTGAATCCATGGTTGTGGCAGTTGATGTGCACGTAGTACGAGCACCCGCAGTTGAGGTCTACTCTCCGTCGCCGGATGGCCCTACGCTTAGCTGCCCTGTGTTGAACCTTGATCGGCACTGGAGTAGAGTGGCCCGTCGAGGGAGATGAAGGTCGCATTTCTTATTGCCCAAGCCTTCAATGCCGTATTCTTCGGCTCGTCAAGGAACTCTTTATAGCTGGAATTGGGCCCAGGATTGCACAGGAAGATAGTGGGTATCCCACCTTTAATTTGAACCGGCTTTCCGTATTTGGTGTTGCTTTGCCAGTCCCTCTGGGCCCCCATGAATTCCTTGAAGTGCTTTAGGTAGTGGGGATCTACGTCATCAATGACGTTGTACCACGCGTCGTTTCTGTAGACCCTAGGACTCAAGTCCAGATGGCCACATAGGTAGTTATGTGGACCCAATGACCTAGCCCACATCGTCTTCCCCGTCCGACTATCGCCCTCTATGACAATACTATTAGGTCTCAAAGGCCGCGCAGCTGCATCCATGACGTTCTCTGACACCCACTGCTCAAGTTCATCTGGAACTTGGTCAAATGAAGATGATGAGAAGGGAGAAACGTACACCTCGGCGGGAGGTGTAAAAATCTTGTCCAGATTTGAGCTGATGTTATGGAAGTCCCTGACATAATCCCTAGGTGCTAATTCCCTAAGGATCCTAAGAGCCTCTGACTTACTTCCGCTGTTAATTGCTGCGGCGTAAGCGTCGTTCGCAGTCTGTTGACCCCCCCGTGCAGATCGCCCGTCGATCTGGAATGTGCCCCATTCAAGGGTATCTCCGTCCTTGTCGATGTAGGACTTGACGTCGGAGCTGGATTTAGCTCCCTGTATGTTCGGATGGAAATGTGCTGACCTGGTTGGGGATACCAGGTCGAAGAATCGCTGATTCTGGCATTTGTATTTTCCGTTGAATTGGATGAGCACATGCAGATGAGGCTCCCCATTCTCGTGTATCTCTCGGCAGATTTTGATGAATTTAGGGCTAGTGGGCGTTTGAAGCCCCCTAATTTGGGAAAGAGCCTCTTCTTTAGTGAGAGAGCACCGAGGATATGTGAGGAAATAATTCTTAGCGTTTATAATAAAACGCTTGGGTGGAGACATTTTCTCTCTCCTGAGACCCAATTGGTGCCTCTTCCATTTACTCCTGTAATCGGGTATAAGGTCTCAATATATATGATGATACCCAAATGGCACGGAGTGTAAATATGTGGAATATAATTTGAATTTCAAATTGACACGCGGCCATCCTTATAATATT

Gene Information

NCBI Accession YP_009508299.1
Location 134-472
Gene Name V2
Protein Name precoat protein
Coding Region ATGTGGGACCCTCTCCTCAACGAGTTCCCAGATTCCGTCCACGGTTTCCGGTGTATGCTTGCCGTGAAATACCTTCAGTTGGTGGAAGGTACCTATTCTCCTGACACTCTGGGTCACGAGTTAATCAGGGATCTCATATCTGTCATCAGGGCGAAGAATTATGCCGAAGCGACCAGCAGATATCATCATTTCCACACCAGGCTCGAAGGTTCGTCGCCGTCTGAACTTCGACAGCCCATATGCCAGCCGTGCAGCTGCCCCTACTGTCCGCGTCACAAGAAGTCAGGCCTGGACCAACAGGCCCATGAATCGCAAGCCCAAGTGGTACAGGATTTATAG
Protein Sequence MWDPLLNEFPDSVHGFRCMLAVKYLQLVEGTYSPDTLGHELIRDLISVIRAKNYAEATSRYHHFHTRLEGSSPSELRQPICQPCSCPYCPRHKKSGLDQQAHESQAQVVQDL

NCBI Accession YP_009508300.1
Location 294-1064
Gene Name V1
Protein Name coat protein
Coding Region ATGCCGAAGCGACCAGCAGATATCATCATTTCCACACCAGGCTCGAAGGTTCGTCGCCGTCTGAACTTCGACAGCCCATATGCCAGCCGTGCAGCTGCCCCTACTGTCCGCGTCACAAGAAGTCAGGCCTGGACCAACAGGCCCATGAATCGCAAGCCCAAGTGGTACAGGATTTATAGAAGCCCAGATGTCCCTAAGGGCTGTGAAGGCCCATGTAAGGTCCAGTCCTTTGAGTCTAGACACGACGTCGTTCATATAGGTAAGGTCATGTGCATCTCAGATGTCACCCGTGGAACAGGGTTCACCCATCGCGTAGGTAAGAGGTTCTGCGTCAAGTCCGTGTACATCCTGGGCAAGATATGGATGGACGAAAACATCAAGACCAAGAACCACACGAACACTGTGATGTTCTTCCTCGTCAGGGATCGTAGGCCCGTGGACAAACCCCAGGATTTTGGTGAGGTGTTCAACATGTTCGATAACGAGCCCAGTACTGCTACGGTTAAAAACATGTACCGTGATCGGTACCAGGTGTTAAGGAAGTGGAGTTCCACTGTCACTGGTGGTCAGTATGCGAGCAAAGAGCAGGCAATAGTTAGGCGTTTTTTTAGGGTTAATAATTATGTTGTGTATAATCAGCAAGAGGCTGGTAAGTACGAAAACCATACGGAGAATGCATTGATGCTGTACATGGCGTGTACTCACGCCTCTAACCCCGTGTATGCTACGCTTAAGATACGGATCTACTTCTACGATTCAGTATCCAATTAA
Protein Sequence MPKRPADIIISTPGSKVRRRLNFDSPYASRAAAPTVRVTRSQAWTNRPMNRKPKWYRIYRSPDVPKGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGTGFTHRVGKRFCVKSVYILGKIWMDENIKTKNHTNTVMFFLVRDRRPVDKPQDFGEVFNMFDNEPSTATVKNMYRDRYQVLRKWSSTVTGGQYASKEQAIVRRFFRVNNYVVYNQQEAGKYENHTENALMLYMACTHASNPVYATLKIRIYFYDSVSN

NCBI Accession YP_009508301.1
Location 1061-1465
Gene Name C3
Protein Name AL3 protein
Coding Region ATGGATTCACGCACAGGGGAACTCATCACTGCAGCTCAGGCGATGAATGGCGTCTATACCTGGGAGGTTCCAAATCCCCTCTATTTCAAGATCATAGACCACAGCAGCCGGCCGTTCCTGATGGAACACGACATAATAACCGTCCAGATACGGTTCAACCACAACCTGAGGAAAGCGTTGGGACTACATCAATGCTGGATGGATTTCAAAATCTGGACGACCTTACGGCCTCAGACCTTGCGTTTCTTGAGGGTTTTTAGGTACCAGGTACTCAGATACCTGGACATGTTAGGGGTCATATGTATAAATACGGTCGTTAGAGCCGTAGAGCATGTATTGTACAGTGTACTCACAGGGACTGAATCAGTTGAGCAGTCAAATTTAATAAAATTTAAAATTTATTAA
Protein Sequence MDSRTGELITAAQAMNGVYTWEVPNPLYFKIIDHSSRPFLMEHDIITVQIRFNHNLRKALGLHQCWMDFKIWTTLRPQTLRFLRVFRYQVLRYLDMLGVICINTVVRAVEHVLYSVLTGTESVEQSNLIKFKIY

NCBI Accession YP_009508302.1
Location 1206-1613
Gene Name C2
Protein Name transcription activator protein
Coding Region ATGCGACCTTCATCTCCCTCGACGGGCCACTCTACTCCAGTGCCGATCAAGGTTCAACACAGGGCAGCTAAGCGTAGGGCCATCCGGCGACGGAGAGTAGACCTCAACTGCGGGTGCTCGTACTACGTGCACATCAACTGCCACAACCATGGATTCACGCACAGGGGAACTCATCACTGCAGCTCAGGCGATGAATGGCGTCTATACCTGGGAGGTTCCAAATCCCCTCTATTTCAAGATCATAGACCACAGCAGCCGGCCGTTCCTGATGGAACACGACATAATAACCGTCCAGATACGGTTCAACCACAACCTGAGGAAAGCGTTGGGACTACATCAATGCTGGATGGATTTCAAAATCTGGACGACCTTACGGCCTCAGACCTTGCGTTTCTTGAGGGTTTTTAG
Protein Sequence MRPSSPSTGHSTPVPIKVQHRAAKRRAIRRRRVDLNCGCSYYVHINCHNHGFTHRGTHHCSSGDEWRLYLGGSKSPLFQDHRPQQPAVPDGTRHNNRPDTVQPQPEESVGTTSMLDGFQNLDDLTASDLAFLEGF

NCBI Accession YP_009508303.1
Location 1543-2601
Gene Name C1
Protein Name replication initiator protein
Coding Region ATGTCTCCACCCAAGCGTTTTATTATAAACGCTAAGAATTATTTCCTCACATATCCTCGGTGCTCTCTCACTAAAGAAGAGGCTCTTTCCCAAATTAGGGGGCTTCAAACGCCCACTAGCCCTAAATTCATCAAAATCTGCCGAGAGATACACGAGAATGGGGAGCCTCATCTGCATGTGCTCATCCAATTCAACGGAAAATACAAATGCCAGAATCAGCGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATACAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGAGATACCCTTGAATGGGGCACATTCCAGATCGACGGGCGATCTGCACGGGGGGGTCAACAGACTGCGAACGACGCTTACGCCGCAGCAATTAACAGCGGAAGTAAGTCAGAGGCTCTTAGGATCCTTAGGGAATTAGCACCTAGGGATTATGTCAGGGACTTCCATAACATCAGCTCAAATCTGGACAAGATTTTTACACCTCCCGCCGAGGTGTACGTTTCTCCCTTCTCATCATCTTCATTTGACCAAGTTCCAGATGAACTTGAGCAGTGGGTGTCAGAGAACGTCATGGATGCAGCTGCGCGGCCTTTGAGACCTAATAGTATTGTCATAGAGGGCGATAGTCGGACGGGGAAGACGATGTGGGCTAGGTCATTGGGTCCACATAACTACCTATGTGGCCATCTGGACTTGAGTCCTAGGGTCTACAGAAACGACGCGTGGTACAACGTCATTGATGACGTAGATCCCCACTACCTAAAGCACTTCAAGGAATTCATGGGGGCCCAGAGGGACTGGCAAAGCAACACCAAATACGGAAAGCCGGTTCAAATTAAAGGTGGGATACCCACTATCTTCCTGTGCAATCCTGGGCCCAATTCCAGCTATAAAGAGTTCCTTGACGAGCCGAAGAATACGGCATTGAAGGCTTGGGCAATAAGAAATGCGACCTTCATCTCCCTCGACGGGCCACTCTACTCCAGTGCCGATCAAGGTTCAACACAGGGCAGCTAA
Protein Sequence MSPPKRFIINAKNYFLTYPRCSLTKEEALSQIRGLQTPTSPKFIKICREIHENGEPHLHVLIQFNGKYKCQNQRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYIDKDGDTLEWGTFQIDGRSARGGQQTANDAYAAAINSGSKSEALRILRELAPRDYVRDFHNISSNLDKIFTPPAEVYVSPFSSSSFDQVPDELEQWVSENVMDAAARPLRPNSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPRVYRNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEPKNTALKAWAIRNATFISLDGPLYSSADQGSTQGS

NCBI Accession YP_009508304.1
Location 2142-2444
Gene Name C4
Protein Name C4 protein
Coding Region ATGGGGAGCCTCATCTGCATGTGCTCATCCAATTCAACGGAAAATACAAATGCCAGAATCAGCGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATACAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGAGATACCCTTGAATGGGGCACATTCCAGATCGACGGGCGATCTGCACGGGGGGGTCAACAGACTGCGAACGACGCTTACGCCGCAGCAATTAACAGCGGAAGTAAGTCAGAGGCTCTTAGGATCCTTAGGGAATTAG
Protein Sequence MGSLICMCSSNSTENTNARISDSSTWYPQPGQHISIRTYRELNPAPTSSPTSTRTEIPLNGAHSRSTGDLHGGVNRLRTTLTPQQLTAEVSQRLLGSLGN