Hybanthus yellow mosaic virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_018580615.1
Isolate Colombia
Release date 2021/6/1
Submitter Lopez-Lopez,K., Jara-Tejada,F., Vaca-Vaca,J.C.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_055543
ACCGGATGGCCGCGCATCGGTGTACGCTCTCTCTCTCCCTTTAATTTAAATTAAAGCGTACCGCTTTCGTCCGAACCAATCATGTAGCGCCTGACGAGCTTAGATATTTTAAACAACTTGGGCGCTAAGTTGTTGTGTGTGTTTTATAAATTAAAGAGCCTCGGCCCACTGCCTTTAACTCAAAATGCCTAAGCGCGATGCCCCGTGGCGCTCGATGGCGGGAACATCAAAGGTTAGTCGCAATGTGAATTATTCTCCTCGTGGAGGCAGTGGCCCAAAATTAAACAGGGCCTCTGAATGGGTTAACAGGCCCATGTACAGGAAGCCCAGGATCTACCGAACACTGAGGACTCCTGATGTTCCAAGGGGATGTGAAGGCCCGTGTAAGGTACAGTCTTACGAACAGCGTCATGACATATCCCATGTCGGTAAGGTAATGTGTATATCTGACGTCACACGTGGAAATGGTATCACCCACCGTGTTGGCAAGCGTTTCTGTGTTAAGTCTGTGTATATTCTAGGCAAGATATGGATGGATGAGAATATCAAGCTGAAGAACCACACGAACAGCGTCATGTTCTGGCTGGTCAGGGACCGTAGACCGTATGGAACTCCCATGGACTTTGGCCAGGTGTTCAACATGTTTGACAACGAGCCCAGCACTGCCACAGTGAAGAACGATCTCCGTGATCGTTTCCAGGTCATGCATAAGTTTTATGGCAAGGTGACAGGTGGACAATATGCCAGCAATGAACAGGCAATCGTCAAGCGTTTCTGGAGGGTCAACAATCATGTGGTCTACAACCACCAGGAGGCTGGCAAGTACGAGAATCATACGGAGAACGCTTTGTTATTGTACATGGCATGTACACATGCCTCTAATCCCGTGTATGCAACGCTTAAGATTCGGATCTATTTTTATGATTCGATTTTAAATTAATAAAGCTTGAATTTTATTACATGTGGAAGCTCATTACATTCGATGTCCATCGTATCGACGGAGTATGTCACAGCCCTAATTACATTATTAATACAAATGACACCTAATCTATCTAAGTAACGATTAATCCTCGAACAGAATATCTTGTAGAAACTGGTACTGTTCCAGTGAGATGGTGTCCAGATCATCAGGTTCAGCCAACACTTGAGAAGACCCAGCTTCTTCCTGAGGTTGTGGTTGAATCGTATTTGGAACCGGTACCTCTTCGCTCTGTTGAGCTCCACAACCGACGTGATCTCGAAATATAGGGGATTTTCTATCTCCCAGATATACACGCCACTCTCTGCCTGACGTGCAGTGATGAGTTCCCCTGTGCGTGAATCCATGTCCCGTACAGCCTATGTGGAAATATATGGAGCAACCGCACTCCAGATCAATGCGGCGTCGTCTGACCGCCCTTTTCTTGGCCTCCCTGTGTTTCTTCTTGATAGAGGGGGGAGTGCAAGGTGATGAAGACCGCATTCTTTAAAGTCCAGTTCCTGAGAGCTGTGTTTTCCTCTTTGTTCAGGTAATCTTTATAGCTGGCACCCTCGCCAGGATTGCACAGCACGATTGATGGGATCCCTCCTTTAATCAGGACTGGCTTTCCGTACTTGCAATTTGACTGCCAATCTTTTTGGGCGCCTATCAAATCCTTCCAGTGCTTTAGCTTTAGATAGTGCGGTGCGACGTCATCAATGACGTTATATTCCACTTCGTCTGAGAAAACTCTGGAATTGAAGTCTAGGTGTCCACTTAAATAATTATGTGGGCCTAATGCCCGAGCCCACATCGTCTTCCCTGTCCTTGAATCACCTTCTACTATGAGACTCACTGGTCTTTCTGGCCGCGCAGCGGCATCTCTTCCAAAATAATCGTCTGCCCATTCTTGCATTTCTTCTGGAACGTTAGTGAACGAGGAAAGGGGAAACGGAGGAACCCATGGTTCCGGAGGCTTTTTAAATATGCTTGTAGCGTTAGCGACGAGATTGTGATGCTGAAGGAAGAAATGTTGCGGTTGTTCTTCCTTTATTATGCGCAGAGCTTGTTCTGCGGATCCTGCATTTAACGCCTTGGCATATGTGTCGTTAGCAGACTGCTTGCCTCCTCGAGCAGATCTGCCGTCGATTTGGAACTCTCCCCATTCAATGGTGTCTCCGTCCTTGTCGATGTAAGACTTGACGTCGGAGCTGGATTTAGCTCCCTGAATGTTCGGATGGAAATGTACTGACCTGGTTGGGGACACCAGATCGAAGAATCTGTTACTCGTGCACTGGTATTTCCCCTCGAACTGGATAAGGACGTGCAGATGAGGTTCCCCATCTTCGTGTAATTCCCTGCAGATCTTGATAAATTTCTTGTTCACTGGCGTTTTTAGGTTTTTGATTTGGGAAAGTGCTTCTTCTTTAGTAAGAGAGCACTGGGGATATGTGAGGAAATAGTTCTTCGAGTGAACTCTAAACTTCTTAGGCGGTGGCATTTTTGTAATAAGAAGGGGTACACCAATTGAGCTCTCTCAAAACTGTCTCAAACAATCGGTGTATTGGGGTAACTTAAATACTAGAACCCTCAATCTCGGTTTGGGGACACGTGGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession YP_010087338.1
Location 185-940
Gene Name AR1
Protein Name coat protein
Coding Region ATGCCTAAGCGCGATGCCCCGTGGCGCTCGATGGCGGGAACATCAAAGGTTAGTCGCAATGTGAATTATTCTCCTCGTGGAGGCAGTGGCCCAAAATTAAACAGGGCCTCTGAATGGGTTAACAGGCCCATGTACAGGAAGCCCAGGATCTACCGAACACTGAGGACTCCTGATGTTCCAAGGGGATGTGAAGGCCCGTGTAAGGTACAGTCTTACGAACAGCGTCATGACATATCCCATGTCGGTAAGGTAATGTGTATATCTGACGTCACACGTGGAAATGGTATCACCCACCGTGTTGGCAAGCGTTTCTGTGTTAAGTCTGTGTATATTCTAGGCAAGATATGGATGGATGAGAATATCAAGCTGAAGAACCACACGAACAGCGTCATGTTCTGGCTGGTCAGGGACCGTAGACCGTATGGAACTCCCATGGACTTTGGCCAGGTGTTCAACATGTTTGACAACGAGCCCAGCACTGCCACAGTGAAGAACGATCTCCGTGATCGTTTCCAGGTCATGCATAAGTTTTATGGCAAGGTGACAGGTGGACAATATGCCAGCAATGAACAGGCAATCGTCAAGCGTTTCTGGAGGGTCAACAATCATGTGGTCTACAACCACCAGGAGGCTGGCAAGTACGAGAATCATACGGAGAACGCTTTGTTATTGTACATGGCATGTACACATGCCTCTAATCCCGTGTATGCAACGCTTAAGATTCGGATCTATTTTTATGATTCGATTTTAAATTAA
Protein Sequence MPKRDAPWRSMAGTSKVSRNVNYSPRGGSGPKLNRASEWVNRPMYRKPRIYRTLRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRFQVMHKFYGKVTGGQYASNEQAIVKRFWRVNNHVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSILN

NCBI Accession YP_010087339.1
Location 937-1326
Gene Name AL3
Protein Name replication enhancement protein
Coding Region ATGGATTCACGCACAGGGGAACTCATCACTGCACGTCAGGCAGAGAGTGGCGTGTATATCTGGGAGATAGAAAATCCCCTATATTTCGAGATCACGTCGGTTGTGGAGCTCAACAGAGCGAAGAGGTACCGGTTCCAAATACGATTCAACCACAACCTCAGGAAGAAGCTGGGTCTTCTCAAGTGTTGGCTGAACCTGATGATCTGGACACCATCTCACTGGAACAGTACCAGTTTCTACAAGATATTCTGTTCGAGGATTAATCGTTACTTAGATAGATTAGGTGTCATTTGTATTAATAATGTAATTAGGGCTGTGACATACTCCGTCGATACGATGGACATCGAATGTAATGAGCTTCCACATGTAATAAAATTCAAGCTTTATTAA
Protein Sequence MDSRTGELITARQAESGVYIWEIENPLYFEITSVVELNRAKRYRFQIRFNHNLRKKLGLLKCWLNLMIWTPSHWNSTSFYKIFCSRINRYLDRLGVICINNVIRAVTYSVDTMDIECNELPHVIKFKLY

NCBI Accession YP_010087340.1
Location 1064-1462
Gene Name AL2
Protein Name transactivator protein
Coding Region ATGCGGTCTTCATCACCTTGCACTCCCCCCTCTATCAAGAAGAAACACAGGGAGGCCAAGAAAAGGGCGGTCAGACGACGCCGCATTGATCTGGAGTGCGGTTGCTCCATATATTTCCACATAGGCTGTACGGGACATGGATTCACGCACAGGGGAACTCATCACTGCACGTCAGGCAGAGAGTGGCGTGTATATCTGGGAGATAGAAAATCCCCTATATTTCGAGATCACGTCGGTTGTGGAGCTCAACAGAGCGAAGAGGTACCGGTTCCAAATACGATTCAACCACAACCTCAGGAAGAAGCTGGGTCTTCTCAAGTGTTGGCTGAACCTGATGATCTGGACACCATCTCACTGGAACAGTACCAGTTTCTACAAGATATTCTGTTCGAGGATTAA
Protein Sequence MRSSSPCTPPSIKKKHREAKKRAVRRRRIDLECGCSIYFHIGCTGHGFTHRGTHHCTSGREWRVYLGDRKSPIFRDHVGCGAQQSEEVPVPNTIQPQPQEEAGSSQVLAEPDDLDTISLEQYQFLQDILFED

NCBI Accession YP_010087341.1
Location 1374-2459
Gene Name AL1
Protein Name replication associated protein
Coding Region ATGCCACCGCCTAAGAAGTTTAGAGTTCACTCGAAGAACTATTTCCTCACATATCCCCAGTGCTCTCTTACTAAAGAAGAAGCACTTTCCCAAATCAAAAACCTAAAAACGCCAGTGAACAAGAAATTTATCAAGATCTGCAGGGAATTACACGAAGATGGGGAACCTCATCTGCACGTCCTTATCCAGTTCGAGGGGAAATACCAGTGCACGAGTAACAGATTCTTCGATCTGGTGTCCCCAACCAGGTCAGTACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCTTACATCGACAAGGACGGAGACACCATTGAATGGGGAGAGTTCCAAATCGACGGCAGATCTGCTCGAGGAGGCAAGCAGTCTGCTAACGACACATATGCCAAGGCGTTAAATGCAGGATCCGCAGAACAAGCTCTGCGCATAATAAAGGAAGAACAACCGCAACATTTCTTCCTTCAGCATCACAATCTCGTCGCTAACGCTACAAGCATATTTAAAAAGCCTCCGGAACCATGGGTTCCTCCGTTTCCCCTTTCCTCGTTCACTAACGTTCCAGAAGAAATGCAAGAATGGGCAGACGATTATTTTGGAAGAGATGCCGCTGCGCGGCCAGAAAGACCAGTGAGTCTCATAGTAGAAGGTGATTCAAGGACAGGGAAGACGATGTGGGCTCGGGCATTAGGCCCACATAATTATTTAAGTGGACACCTAGACTTCAATTCCAGAGTTTTCTCAGACGAAGTGGAATATAACGTCATTGATGACGTCGCACCGCACTATCTAAAGCTAAAGCACTGGAAGGATTTGATAGGCGCCCAAAAAGATTGGCAGTCAAATTGCAAGTACGGAAAGCCAGTCCTGATTAAAGGAGGGATCCCATCAATCGTGCTGTGCAATCCTGGCGAGGGTGCCAGCTATAAAGATTACCTGAACAAAGAGGAAAACACAGCTCTCAGGAACTGGACTTTAAAGAATGCGGTCTTCATCACCTTGCACTCCCCCCTCTATCAAGAAGAAACACAGGGAGGCCAAGAAAAGGGCGGTCAGACGACGCCGCATTGA
Protein Sequence MPPPKKFRVHSKNYFLTYPQCSLTKEEALSQIKNLKTPVNKKFIKICRELHEDGEPHLHVLIQFEGKYQCTSNRFFDLVSPTRSVHFHPNIQGAKSSSDVKSYIDKDGDTIEWGEFQIDGRSARGGKQSANDTYAKALNAGSAEQALRIIKEEQPQHFFLQHHNLVANATSIFKKPPEPWVPPFPLSSFTNVPEEMQEWADDYFGRDAAARPERPVSLIVEGDSRTGKTMWARALGPHNYLSGHLDFNSRVFSDEVEYNVIDDVAPHYLKLKHWKDLIGAQKDWQSNCKYGKPVLIKGGIPSIVLCNPGEGASYKDYLNKEENTALRNWTLKNAVFITLHSPLYQEETQGGQEKGGQTTPH