Hibiscus yellow vein leaf curl virus


Basic Information

Genus Begomovirus
Isolate Taiwan
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

MF140451
CCCGAGACGGTTCACGGGTTTCGGTGCATGCTTTCTATCAAATATCTTCAGTTACTCTCTGAAGGCTATTCTCCGGATACGGTTGGTTACGATCTAATACGTGAATTAATTTCTATTTTGCGTTCCAGGAATTATGTCGAAGCGTCCTGCAGATATCGTAATTTCTACCCCCGCGTCGAAGGTGCGTCGTCGTCTGAACTTCGACAGCCCTTACTCAACCCGTGTAGCTGTCCCTACTGTCCGCGTCACAAAATCTCGAATGTGGGCGAACAGGCCCACGAATCGCAAGCCCAGAATGTACAGGATGTACAGAAGCCCTGATGTTCCAAAGGGTTGCGAGGGTCCATGTAAGGTTCAGTCATTTGAGTCTAGACACGACGTAGTCCATATAGGTAAGGTTATGTGTATTAGTGATGTCACCCGTGGTACAGGTCTGACCCATAGAGTTGGTAAGCGTTTCTGTGTTAAGTCAGTTTATGTTTTGGGTAAGATATGGATGGATGAAAATATTAAGACCAAGAATCATACGAATAATGTTATGTTCTTCCTTGTTCGTGATCGACGTCCGACCGGCACGCCCCAGGATTTTGGAGAAGTGTTCAACATGTTTGACAACGAGCCTAGCACTGCTACTGTAAAGAATGTGCATCGAGATCGTTACCAGGTTCTTAGGAAATGGTATGCAACCGTCACTGGTGGACAGTATGCTGCAAAGGAGCAGGCGTTGGTTAAGAAATTTATTAAGGTTAATAATTATGTTGTTTATAACCAGCAAGAGGCTGGGAAATACGAGAACCATTCTGAGAATGCCTTGATGTTGTATATGGCATGTACGCATGCCTCTAATCCTGTTTACGCTACTCTTAAGATTAGGATTTACTTCTACGATTCTGTAACGAACTGATATTAATAAAGATCGAATTTTATTTCTGAATTCATGTCTACATACATTGTTTGCTCTATCTTTCTCCATAATACATGATCTACAGCTCTTATAATTGCGTTAATTGAGATTACACCTAGATTGTTGAGATATTTGAGGACTTGTGTTTTGAATACCCTTAAGAAAAGACCAGTCTGAGGGCGTAAGGTCGTCCAGATTCGGTAGGTTAGAAAACACTTGTGCACTCCCAGAGCTTTCCGAAGGTTGTAGTTGAATTGGATCCTTATTGTTATGATGTCCATGTTCATCGTGAATGGACGGTCGGCGTGGTTGAGGATCTTGAAATAAAGGGGATTTGGAACCTCCCAGATATAGGCGCCATTCCATGCTTGAGCTGCAGTGATGGGTTCCCCTGTGCGTAAATCCATGGTCGTAGCAGTTGATTGACAGAAAATAAGAACAGCCGCATTCAAGATCTACTCTCTTCCTCCTGTTGCGTTTCTTCGCTTCCCTGTGCTGTACTTTGATTGGATCCTGAGTATAGTGGTCTTTCGAGGGTGACGAAGATCGCATTCTTGAGGGTCCAGTTTTTTAGTGCGGTGTTCTTTTCCTCGTCGAGGAATTCTTTATAGCTGCTGTTGGGACCAGGATTGCAAAGGAAGATTGTGGGTATCCCGCCTTTAATTTGAACTGGTTTTCCGTATTTTGTGTTGGACTGCCAGTCTCTTTGGGCCCCCATGAACTCTTTAAAGTGTTTGAGGAAATGCGGGTCGACGTCATCAATTACGTTGTACCAGGCGTCGTTACTGTATACTTTGGGACTCAGGTCCAGATGTCCGCACAAATAGTTATGTGGTCCCAATGACCTAGCCCACATCGTCTTTCCCGTACGACTATCTCCCTCAATTACTATACTCCGAGGTCTAAGGGGCCGCGCAGCGGCATCGACAACGTTATCCAACGCCCAAACTTCAAGTGCTTCTGGAACTTGATCGAACGAAGAAGAAGAAAAAGGAGAAACATAAGGAGCTGGTGGCTCCTGAAAGATCCTGTCTAGATTTGCATTTAAATTATGAAATTGTAGTACAAAATCTTTAGGAGCTAGTTCCTTAATGACTCTAAGAGCCTCTGACTTACTTCCCGCGTTAAGCGCTGCGGCGTAAGCGTCGTTGGCTGTCTGTTGTCCTCCTCTTGCTGATCTTCCATCGATCTGAAACTCTCCCCACTCGAGAGTGTCCCCGTCCTTGTCGATGTAGTCCTTGACATCTGAGCTTGATTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCTGGTTGGGGATACCAGGTCGAAGAATCTGTTATTCGTGCAGATGAATTTGCCCTCGAACTGGATGAGCACATGGAGATGAGGGCTCCCATCTTCGTGTAACTCTCTGCAGACTTTGATGTATTTTTTATTCGAGGGTGTGTTGATGGCTTGAATTTGGGAAAGTGCTTCCTCTTTAGTGAGTGAGCACTGTGGATAAGTGAGGAAATAATTTTTGGCTTGTATTTTAAAACGCTTGGGGGGAGCCATTGACTTTGGTCAATTGGAGACAACTGATTTCATTTTACTCTGGCAATTGGAGACAGGAGACAATATATAGTGTCTCCAAATGGCATTATCGTAATTTGAGAAATCATTTCAAAATCCTCACGCTCCAAAAAGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession AWB51906.1
Location 119-466
Gene Name V2
Protein Name V2 protein
Coding Region ATGTGGGATCCACTCTTAAACGAGTTCCCCGAGACGGTTCACGGGTTTCGGTGCATGCTTTCTATCAAATATCTTCAGTTACTCTCTGAAGGCTATTCTCCGGATACGGTTGGTTACGATCTAATACGTGAATTAATTTCTATTTTGCGTTCCAGGAATTATGTCGAAGCGTCCTGCAGATATCGTAATTTCTACCCCCGCGTCGAAGGTGCGTCGTCGTCTGAACTTCGACAGCCCTTACTCAACCCGTGTAGCTGTCCCTACTGTCCGCGTCACAAAATCTCGAATGTGGGCGAACAGGCCCACGAATCGCAAGCCCAGAATGTACAGGATGTACAGAAGCCCTGA
Protein Sequence MWDPLLNEFPETVHGFRCMLSIKYLQLLSEGYSPDTVGYDLIRELISILRSRNYVEASCRYRNFYPRVEGASSSELRQPLLNPCSCPYCPRHKISNVGEQAHESQAQNVQDVQKP

NCBI Accession AWB51907.1
Location 279-1049
Gene Name V1
Protein Name V1 protein
Coding Region ATGTCGAAGCGTCCTGCAGATATCGTAATTTCTACCCCCGCGTCGAAGGTGCGTCGTCGTCTGAACTTCGACAGCCCTTACTCAACCCGTGTAGCTGTCCCTACTGTCCGCGTCACAAAATCTCGAATGTGGGCGAACAGGCCCACGAATCGCAAGCCCAGAATGTACAGGATGTACAGAAGCCCTGATGTTCCAAAGGGTTGCGAGGGTCCATGTAAGGTTCAGTCATTTGAGTCTAGACACGACGTAGTCCATATAGGTAAGGTTATGTGTATTAGTGATGTCACCCGTGGTACAGGTCTGACCCATAGAGTTGGTAAGCGTTTCTGTGTTAAGTCAGTTTATGTTTTGGGTAAGATATGGATGGATGAAAATATTAAGACCAAGAATCATACGAATAATGTTATGTTCTTCCTTGTTCGTGATCGACGTCCGACCGGCACGCCCCAGGATTTTGGAGAAGTGTTCAACATGTTTGACAACGAGCCTAGCACTGCTACTGTAAAGAATGTGCATCGAGATCGTTACCAGGTTCTTAGGAAATGGTATGCAACCGTCACTGGTGGACAGTATGCTGCAAAGGAGCAGGCGTTGGTTAAGAAATTTATTAAGGTTAATAATTATGTTGTTTATAACCAGCAAGAGGCTGGGAAATACGAGAACCATTCTGAGAATGCCTTGATGTTGTATATGGCATGTACGCATGCCTCTAATCCTGTTTACGCTACTCTTAAGATTAGGATTTACTTCTACGATTCTGTAACGAACTGA
Protein Sequence MSKRPADIVISTPASKVRRRLNFDSPYSTRVAVPTVRVTKSRMWANRPTNRKPRMYRMYRSPDVPKGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGTGLTHRVGKRFCVKSVYVLGKIWMDENIKTKNHTNNVMFFLVRDRRPTGTPQDFGEVFNMFDNEPSTATVKNVHRDRYQVLRKWYATVTGGQYAAKEQALVKKFIKVNNYVVYNQQEAGKYENHSENALMLYMACTHASNPVYATLKIRIYFYDSVTN

NCBI Accession AWB51908.1
Location 1052-1456
Gene Name C3
Protein Name C3 protein
Coding Region ATGGATTTACGCACAGGGGAACCCATCACTGCAGCTCAAGCATGGAATGGCGCCTATATCTGGGAGGTTCCAAATCCCCTTTATTTCAAGATCCTCAACCACGCCGACCGTCCATTCACGATGAACATGGACATCATAACAATAAGGATCCAATTCAACTACAACCTTCGGAAAGCTCTGGGAGTGCACAAGTGTTTTCTAACCTACCGAATCTGGACGACCTTACGCCCTCAGACTGGTCTTTTCTTAAGGGTATTCAAAACACAAGTCCTCAAATATCTCAACAATCTAGGTGTAATCTCAATTAACGCAATTATAAGAGCTGTAGATCATGTATTATGGAGAAAGATAGAGCAAACAATGTATGTAGACATGAATTCAGAAATAAAATTCGATCTTTATTAA
Protein Sequence MDLRTGEPITAAQAWNGAYIWEVPNPLYFKILNHADRPFTMNMDIITIRIQFNYNLRKALGVHKCFLTYRIWTTLRPQTGLFLRVFKTQVLKYLNNLGVISINAIIRAVDHVLWRKIEQTMYVDMNSEIKFDLY

NCBI Accession AWB51909.1
Location 1149-1601
Gene Name C2
Protein Name C2 protein
Coding Region ATGCGATCTTCGTCACCCTCGAAAGACCACTATACTCAGGATCCAATCAAAGTACAGCACAGGGAAGCGAAGAAACGCAACAGGAGGAAGAGAGTAGATCTTGAATGCGGCTGTTCTTATTTTCTGTCAATCAACTGCTACGACCATGGATTTACGCACAGGGGAACCCATCACTGCAGCTCAAGCATGGAATGGCGCCTATATCTGGGAGGTTCCAAATCCCCTTTATTTCAAGATCCTCAACCACGCCGACCGTCCATTCACGATGAACATGGACATCATAACAATAAGGATCCAATTCAACTACAACCTTCGGAAAGCTCTGGGAGTGCACAAGTGTTTTCTAACCTACCGAATCTGGACGACCTTACGCCCTCAGACTGGTCTTTTCTTAAGGGTATTCAAAACACAAGTCCTCAAATATCTCAACAATCTAGGTGTAATCTCAATTAA
Protein Sequence MRSSSPSKDHYTQDPIKVQHREAKKRNRRKRVDLECGCSYFLSINCYDHGFTHRGTHHCSSSMEWRLYLGGSKSPLFQDPQPRRPSIHDEHGHHNNKDPIQLQPSESSGSAQVFSNLPNLDDLTPSDWSFLKGIQNTSPQISQQSRCNLN

NCBI Accession AWB51910.1
Location 1498-2589
Gene Name C1
Protein Name C1 protein
Coding Region ATGGCTCCCCCCAAGCGTTTTAAAATACAAGCCAAAAATTATTTCCTCACTTATCCACAGTGCTCACTCACTAAAGAGGAAGCACTTTCCCAAATTCAAGCCATCAACACACCCTCGAATAAAAAATACATCAAAGTCTGCAGAGAGTTACACGAAGATGGGAGCCCTCATCTCCATGTGCTCATCCAGTTCGAGGGCAAATTCATCTGCACGAATAACAGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCAAGCTCAGATGTCAAGGACTACATCGACAAGGACGGGGACACTCTCGAGTGGGGAGAGTTTCAGATCGATGGAAGATCAGCAAGAGGAGGACAACAGACAGCCAACGACGCTTACGCCGCAGCGCTTAACGCGGGAAGTAAGTCAGAGGCTCTTAGAGTCATTAAGGAACTAGCTCCTAAAGATTTTGTACTACAATTTCATAATTTAAATGCAAATCTAGACAGGATCTTTCAGGAGCCACCAGCTCCTTATGTTTCTCCTTTTTCTTCTTCTTCGTTCGATCAAGTTCCAGAAGCACTTGAAGTTTGGGCGTTGGATAACGTTGTCGATGCCGCTGCGCGGCCCCTTAGACCTCGGAGTATAGTAATTGAGGGAGATAGTCGTACGGGAAAGACGATGTGGGCTAGGTCATTGGGACCACATAACTATTTGTGCGGACATCTGGACCTGAGTCCCAAAGTATACAGTAACGACGCCTGGTACAACGTAATTGATGACGTCGACCCGCATTTCCTCAAACACTTTAAAGAGTTCATGGGGGCCCAAAGAGACTGGCAGTCCAACACAAAATACGGAAAACCAGTTCAAATTAAAGGCGGGATACCCACAATCTTCCTTTGCAATCCTGGTCCCAACAGCAGCTATAAAGAATTCCTCGACGAGGAAAAGAACACCGCACTAAAAAACTGGACCCTCAAGAATGCGATCTTCGTCACCCTCGAAAGACCACTATACTCAGGATCCAATCAAAGTACAGCACAGGGAAGCGAAGAAACGCAACAGGAGGAAGAGAGTAGATCTTGA
Protein Sequence MAPPKRFKIQAKNYFLTYPQCSLTKEEALSQIQAINTPSNKKYIKVCRELHEDGSPHLHVLIQFEGKFICTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKDYIDKDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIKELAPKDFVLQFHNLNANLDRIFQEPPAPYVSPFSSSSFDQVPEALEVWALDNVVDAAARPLRPRSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNTALKNWTLKNAIFVTLERPLYSGSNQSTAQGSEETQQEEESRS

NCBI Accession AWB51911.1
Location 2130-2432
Gene Name C4
Protein Name C4 protein
Coding Region ATGGGAGCCCTCATCTCCATGTGCTCATCCAGTTCGAGGGCAAATTCATCTGCACGAATAACAGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCAAGCTCAGATGTCAAGGACTACATCGACAAGGACGGGGACACTCTCGAGTGGGGAGAGTTTCAGATCGATGGAAGATCAGCAAGAGGAGGACAACAGACAGCCAACGACGCTTACGCCGCAGCGCTTAACGCGGGAAGTAAGTCAGAGGCTCTTAGAGTCATTAAGGAACTAG
Protein Sequence MGALISMCSSSSRANSSARITDSSTWYPQPGQHISIRTFRELNQAQMSRTTSTRTGTLSSGESFRSMEDQQEEDNRQPTTLTPQRLTREVSQRLLESLRN