French bean leaf curl virus
Basic Information
Genus |
Begomovirus
|
NCBI Assembly |
GCF_000899775.1 |
Isolate |
India |
Release date |
2015/2/22 |
Submitter |
Kamaal,N., Akram,M., Pratap,A., Yadav,P., Naimuddin |
Host |
|
Vector |
|
Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCGCGATTTTTTTGTGGTCCCCATCCACTTATCAACCAATCACATGTCTCCCTCAAAGTTAAATAACGCTCCCGCCCACTATAAGTACTTAGTCACCAAGTTTTAGTTTGCACCATGTGGGATCCACTTTTGCACGATTTCCCGGAGACTGTATTCGGGTTGAGATGTATGCTTGCGGTGAAGTACCTTCAGCTTGTTGAGCAGTCGTACTCTCCCGACACCCTCGGTTACGATCTTATTCGTGACCTTATATCCGTCGTTCGTGCTCGTAGGTATGCCGAAGCGACAAGCAGATATGCCAATTTCAGTGCCCGGATGGAAAGTACGCCGCCGGCTGAACTTCGACTCCCCCTACGCTGCCCGTGCAGTTGTCCCTATTGTAACCGGCATTTCAAAGTCAAGGGCGTGGGCCAACAGGCCGATGAACAGGAAGCCCAGGATCTATCGAATGTACAGAAGCCCGGATGTTCCTAAGGGGTGTGAAGGTCCGTGTAAGGTCCAGTCATTTGAGTCTAGGCATGATGTCGTTCACATTGGTAAAGTTATGTGCATTAGTGATGTTACTAGGGGTACCGGTTTAACTCATAGGGTCGGTAAGCGTTTTTGTGTTAAGTCTGTTTACGTTCTGGGCAAGATATGGATGGATGAAAACATCAAGACCAAGAACCATACCAACAGCGTCATGTTCTTCCTTGTACGTGATCGTCGTCCAGTGGACAAGCCCCAGGATTTCGGCGAGGTATTCAACATGTTCGATAATGAGCCCAGTACGGCTACGGTTAAGAATATGCATCGTGACCGTTACCAGGTTCTTCGTAAGTGGCATGCCACGGTGACCGGTGGTCAGTACGCGTCCAAGGAGCAAGCTCTTGTCAAGAAATTTGTTAGGGTTAATAATTATGTTGTGTATAACCAGCAAGAAGCTGGCAAGTATGAGAATCATAGTGAGAATGCTTTGATGTTGTATATGGCATGTACTCATGCCTCTAACCCCGTGTATGCTACTCTAAAGATACGGATCTATTTCTACGATTCGGTCACAAATTAATAAAGATTTAATTTTATTATCATTGAATTGTCTACATAAACTGTTTGTGTCAATACATTCCATAAAACATGATTCACAGCTCTAATTACATTGTTGATACTAATTACACCCAAACTATCAAGATATTTCAACACTTGTGTTCTAAATACCCTTAAGAAACGACCAATCTGAAGGTGTGAGTTCGTCCAGATGCGGAAGGTTAGGAAACATTGGTGAATCCCCAATGCTTTCCTCAGGTTGTAGTTGAACTGTATTCGTGCCGTTATTATGTCGTGGTTCGACAGGAAAGGCCTGCTGTGGTGGTCTGTCATCCTGAAATATAGGGGATTTGGAACCGTCCAGATAAAGGCGCCATTCTCGGCTTGAGCTGCAGTGATGAACTCCCCTGTGCGTAAATCCATGGTTGTGGCAGGAAATTGCTACGAAGTAGGAGCAGCCGCATTCAAGGTCCACTCTCCTCCGTCTGAACTTCTTCTTCGCTATCCTGTGCTGAACTTTGATGGGTACCTGAGTAGAGTGGGCGTTGGAGGGTGACGAAGATCGCATTTCTTTGGGCCCAAGTCCTTAGTGCGCTGTTCTTTTCCTCTTCTAGGTACTCTTTATAACTTGAATTGGGCCCTGGATTGCAGAGGAAGATTGTTGGGATGCCGCCTTTAATTTGAACTGGCTTTCCGTACTTTGTGTTTGATTGCCAGTCCCTTTGGGCCCCCATGAATTCTTTAAAGTGCTTTAGATAGTGCGGGTCTACGTCATCAATGACGTTGTACCACGCTTCGTTATTGTACACTTTCGGACTCAGATCTAAATGGCCACATAAGTAATTATGTGGACCCAACGACCTGGCCCACATTGTCTTCCCCGTCCGACTATCACCTTCAACTACTATACTCACCGGTCTCAAGGGCCGCGCAGCGGCATCAACGACGTTCTCGCATGCCCACTCTTCGAGTTCTTCTGGGACTCGATCAAAAGAAGAAGAAGAAAAAGGCGAAATATAAACCTCCATGGGAGGCTCAAAAATTCTATCTAAATTTGCATTTAAATTATGGAACTGTAATACATAATCTTTTGGGGCTAGCTCCCTAAGTATTTTAAGAGCTTCCGACTTGCTTCCCGCGTTAAGTGCTGCTGCGTAAGCGTCGTTTGCTGTCTGCTGGCCCCCTCTTGCAGATCTGCCGTCGATCTGGAAGTCTCCCCACTCCAGTGTGTCTCCGTCCTTGTCGATGTAGGACTTGACGTCGGAGCTGGATTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCTGGTCGGGGATACCAAGTCGAAGAATCGCTGATTCTGGCACTTGTATTTCCCCTCGAACTGGATGAGCACGTGTAGATGAGGTTCCCCATTCTCGTGAAGCTCTCTGCAGATCTTGATGAATTTTTTATTTGTTGGGGTTTCTAAGTTTTTTAATTGGGAAAGTGCTTCTTCTTTGGAGAGGGAGCATTTGGGATAAGTTATAAAATAATTCTTCGCATTTATTTGGAATCTCTTGGGAGGCATGTTGACTAAATTGAGTACCGATTGACCCTCTCTGGCAACTCTCTCTAGTAAATGGGTACTCATTATATAGTGAGTACCAAATGGCACTCTCGTAATTTTTGAGTGAAACTCAAAAATCTCACGCTCCAAAAGCGGCCATCCGTATAATATT
Gene Information
NCBI Accession
|
YP_006491261.1
|
Location
|
126-485 |
Gene Name
|
AV2 |
Protein Name
|
precoat protein |
Coding Region
|
ATGTGGGATCCACTTTTGCACGATTTCCCGGAGACTGTATTCGGGTTGAGATGTATGCTTGCGGTGAAGTACCTTCAGCTTGTTGAGCAGTCGTACTCTCCCGACACCCTCGGTTACGATCTTATTCGTGACCTTATATCCGTCGTTCGTGCTCGTAGGTATGCCGAAGCGACAAGCAGATATGCCAATTTCAGTGCCCGGATGGAAAGTACGCCGCCGGCTGAACTTCGACTCCCCCTACGCTGCCCGTGCAGTTGTCCCTATTGTAACCGGCATTTCAAAGTCAAGGGCGTGGGCCAACAGGCCGATGAACAGGAAGCCCAGGATCTATCGAATGTACAGAAGCCCGGATGTTCCTAA |
Protein Sequence
|
MWDPLLHDFPETVFGLRCMLAVKYLQLVEQSYSPDTLGYDLIRDLISVVRARRYAEATSRYANFSARMESTPPAELRLPLRCPCSCPYCNRHFKVKGVGQQADEQEAQDLSNVQKPGCS |
NCBI Accession
|
YP_006491262.1
|
Location
|
286-1059 |
Gene Name
|
AV1 |
Protein Name
|
capsid protein |
Coding Region
|
ATGCCGAAGCGACAAGCAGATATGCCAATTTCAGTGCCCGGATGGAAAGTACGCCGCCGGCTGAACTTCGACTCCCCCTACGCTGCCCGTGCAGTTGTCCCTATTGTAACCGGCATTTCAAAGTCAAGGGCGTGGGCCAACAGGCCGATGAACAGGAAGCCCAGGATCTATCGAATGTACAGAAGCCCGGATGTTCCTAAGGGGTGTGAAGGTCCGTGTAAGGTCCAGTCATTTGAGTCTAGGCATGATGTCGTTCACATTGGTAAAGTTATGTGCATTAGTGATGTTACTAGGGGTACCGGTTTAACTCATAGGGTCGGTAAGCGTTTTTGTGTTAAGTCTGTTTACGTTCTGGGCAAGATATGGATGGATGAAAACATCAAGACCAAGAACCATACCAACAGCGTCATGTTCTTCCTTGTACGTGATCGTCGTCCAGTGGACAAGCCCCAGGATTTCGGCGAGGTATTCAACATGTTCGATAATGAGCCCAGTACGGCTACGGTTAAGAATATGCATCGTGACCGTTACCAGGTTCTTCGTAAGTGGCATGCCACGGTGACCGGTGGTCAGTACGCGTCCAAGGAGCAAGCTCTTGTCAAGAAATTTGTTAGGGTTAATAATTATGTTGTGTATAACCAGCAAGAAGCTGGCAAGTATGAGAATCATAGTGAGAATGCTTTGATGTTGTATATGGCATGTACTCATGCCTCTAACCCCGTGTATGCTACTCTAAAGATACGGATCTATTTCTACGATTCGGTCACAAATTAA |
Protein Sequence
|
MPKRQADMPISVPGWKVRRRLNFDSPYAARAVVPIVTGISKSRAWANRPMNRKPRIYRMYRSPDVPKGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGTGLTHRVGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEPSTATVKNMHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENHSENALMLYMACTHASNPVYATLKIRIYFYDSVTN |
NCBI Accession
|
YP_006491263.1
|
Location
|
589-993 |
Gene Name
|
AC5 |
Protein Name
|
AC5 |
Coding Region
|
ATGAGTACATGCCATATACAACATCAAAGCATTCTCACTATGATTCTCATACTTGCCAGCTTCTTGCTGGTTATACACAACATAATTATTAACCCTAACAAATTTCTTGACAAGAGCTTGCTCCTTGGACGCGTACTGACCACCGGTCACCGTGGCATGCCACTTACGAAGAACCTGGTAACGGTCACGATGCATATTCTTAACCGTAGCCGTACTGGGCTCATTATCGAACATGTTGAATACCTCGCCGAAATCCTGGGGCTTGTCCACTGGACGACGATCACGTACAAGGAAGAACATGACGCTGTTGGTATGGTTCTTGGTCTTGATGTTTTCATCCATCCATATCTTGCCCAGAACGTAAACAGACTTAACACAAAAACGCTTACCGACCCTATGAGTTAA |
Protein Sequence
|
MSTCHIQHQSILTMILILASFLLVIHNIIINPNKFLDKSLLLGRVLTTGHRGMPLTKNLVTVTMHILNRSRTGLIIEHVEYLAEILGLVHWTTITYKEEHDAVGMVLGLDVFIHPYLAQNVNRLNTKTLTDPMS |
NCBI Accession
|
YP_006491264.1
|
Location
|
1056-1460 |
Gene Name
|
AC3 |
Protein Name
|
replication enhancement protein ReP |
Coding Region
|
ATGGATTTACGCACAGGGGAGTTCATCACTGCAGCTCAAGCCGAGAATGGCGCCTTTATCTGGACGGTTCCAAATCCCCTATATTTCAGGATGACAGACCACCACAGCAGGCCTTTCCTGTCGAACCACGACATAATAACGGCACGAATACAGTTCAACTACAACCTGAGGAAAGCATTGGGGATTCACCAATGTTTCCTAACCTTCCGCATCTGGACGAACTCACACCTTCAGATTGGTCGTTTCTTAAGGGTATTTAGAACACAAGTGTTGAAATATCTTGATAGTTTGGGTGTAATTAGTATCAACAATGTAATTAGAGCTGTGAATCATGTTTTATGGAATGTATTGACACAAACAGTTTATGTAGACAATTCAATGATAATAAAATTAAATCTTTATTAA |
Protein Sequence
|
MDLRTGEFITAAQAENGAFIWTVPNPLYFRMTDHHSRPFLSNHDIITARIQFNYNLRKALGIHQCFLTFRIWTNSHLQIGRFLRVFRTQVLKYLDSLGVISINNVIRAVNHVLWNVLTQTVYVDNSMIIKLNLY |
NCBI Accession
|
YP_006491265.1
|
Location
|
1201-1605 |
Gene Name
|
AC2 |
Protein Name
|
transcription activation protein TrAp |
Coding Region
|
ATGCGATCTTCGTCACCCTCCAACGCCCACTCTACTCAGGTACCCATCAAAGTTCAGCACAGGATAGCGAAGAAGAAGTTCAGACGGAGGAGAGTGGACCTTGAATGCGGCTGCTCCTACTTCGTAGCAATTTCCTGCCACAACCATGGATTTACGCACAGGGGAGTTCATCACTGCAGCTCAAGCCGAGAATGGCGCCTTTATCTGGACGGTTCCAAATCCCCTATATTTCAGGATGACAGACCACCACAGCAGGCCTTTCCTGTCGAACCACGACATAATAACGGCACGAATACAGTTCAACTACAACCTGAGGAAAGCATTGGGGATTCACCAATGTTTCCTAACCTTCCGCATCTGGACGAACTCACACCTTCAGATTGGTCGTTTCTTAAGGGTATTTAG |
Protein Sequence
|
MRSSSPSNAHSTQVPIKVQHRIAKKKFRRRRVDLECGCSYFVAISCHNHGFTHRGVHHCSSSREWRLYLDGSKSPIFQDDRPPQQAFPVEPRHNNGTNTVQLQPEESIGDSPMFPNLPHLDELTPSDWSFLKGI |
NCBI Accession
|
YP_006491266.1
|
Location
|
1502-2590 |
Gene Name
|
AC1 |
Protein Name
|
replication associated protein Rep |
Coding Region
|
ATGCCTCCCAAGAGATTCCAAATAAATGCGAAGAATTATTTTATAACTTATCCCAAATGCTCCCTCTCCAAAGAAGAAGCACTTTCCCAATTAAAAAACTTAGAAACCCCAACAAATAAAAAATTCATCAAGATCTGCAGAGAGCTTCACGAGAATGGGGAACCTCATCTACACGTGCTCATCCAGTTCGAGGGGAAATACAAGTGCCAGAATCAGCGATTCTTCGACTTGGTATCCCCGACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGAGACACACTGGAGTGGGGAGACTTCCAGATCGACGGCAGATCTGCAAGAGGGGGCCAGCAGACAGCAAACGACGCTTACGCAGCAGCACTTAACGCGGGAAGCAAGTCGGAAGCTCTTAAAATACTTAGGGAGCTAGCCCCAAAAGATTATGTATTACAGTTCCATAATTTAAATGCAAATTTAGATAGAATTTTTGAGCCTCCCATGGAGGTTTATATTTCGCCTTTTTCTTCTTCTTCTTTTGATCGAGTCCCAGAAGAACTCGAAGAGTGGGCATGCGAGAACGTCGTTGATGCCGCTGCGCGGCCCTTGAGACCGGTGAGTATAGTAGTTGAAGGTGATAGTCGGACGGGGAAGACAATGTGGGCCAGGTCGTTGGGTCCACATAATTACTTATGTGGCCATTTAGATCTGAGTCCGAAAGTGTACAATAACGAAGCGTGGTACAACGTCATTGATGACGTAGACCCGCACTATCTAAAGCACTTTAAAGAATTCATGGGGGCCCAAAGGGACTGGCAATCAAACACAAAGTACGGAAAGCCAGTTCAAATTAAAGGCGGCATCCCAACAATCTTCCTCTGCAATCCAGGGCCCAATTCAAGTTATAAAGAGTACCTAGAAGAGGAAAAGAACAGCGCACTAAGGACTTGGGCCCAAAGAAATGCGATCTTCGTCACCCTCCAACGCCCACTCTACTCAGGTACCCATCAAAGTTCAGCACAGGATAGCGAAGAAGAAGTTCAGACGGAGGAGAGTGGACCTTGA |
Protein Sequence
|
MPPKRFQINAKNYFITYPKCSLSKEEALSQLKNLETPTNKKFIKICRELHENGEPHLHVLIQFEGKYKCQNQRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYIDKDGDTLEWGDFQIDGRSARGGQQTANDAYAAALNAGSKSEALKILRELAPKDYVLQFHNLNANLDRIFEPPMEVYISPFSSSSFDRVPEELEEWACENVVDAAARPLRPVSIVVEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYNNEAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEYLEEEKNSALRTWAQRNAIFVTLQRPLYSGTHQSSAQDSEEEVQTEESGP |
NCBI Accession
|
YP_006491267.1
|
Location
|
2134-2436 |
Gene Name
|
AC4 |
Protein Name
|
AC4 protein |
Coding Region
|
ATGGGGAACCTCATCTACACGTGCTCATCCAGTTCGAGGGGAAATACAAGTGCCAGAATCAGCGATTCTTCGACTTGGTATCCCCGACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAGGACGGAGACACACTGGAGTGGGGAGACTTCCAGATCGACGGCAGATCTGCAAGAGGGGGCCAGCAGACAGCAAACGACGCTTACGCAGCAGCACTTAACGCGGGAAGCAAGTCGGAAGCTCTTAAAATACTTAGGGAGCTAG |
Protein Sequence
|
MGNLIYTCSSSSRGNTSARISDSSTWYPRPGQHISIRTFRELNPAPTSSPTSTRTETHWSGETSRSTADLQEGASRQQTTLTQQHLTREASRKLLKYLGS |