Euphorbia yellow leaf curl virus
Basic Information
Genus |
Begomovirus
|
NCBI Assembly |
GCF_003029205.1 |
Isolate |
Pakistan |
Release date |
2018/8/26 |
Submitter |
Riaz,H., Ashfaq,M. |
Host |
|
Vector |
|
Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCGTTTTTTTTTGTGGCCCCCAGAAAGCACTAACTGACAATGACATGTGGACCAATGAGAATCCTTTCTCATAGCCTGATTATTTCATGGTCCCCCCTATAACTTAGTGCGCAAGTATGTGGGATCCATTAGTAAACGAGTTTCCCGAAACCGTTCACGGTTTTCGATGTATGTTGGCAGTGAAATATCTCCAACTAGTTGCGGATACGTATTCCCCAGATACGGTGGGATACGATTTAATACGTGATTTAATTTGTATTCTACGTTCCAGGAATTATGTCGAAGCGCAAAGCAGATATAATCATTTCCACCCCAGGCTCGAAGGTTCGACGGAGGCTGAACTTCGACAGTCCAGGATCGAGCCGTGCTTATGTCCCTACTGTCCGCGTCACCAAATCAAGTCTATGGGCCAACAGACCCATGAACAGAAAGCCCAGGATGTACAGGATGTACAGAAGTCCAGATGTCCCTAGAGGATGTGAAGGCCCATGTAAGGTCCAGTCGTTTGAGTCCAGACATGATATTCAGCATATAGGTAAAGTTATGTGTGTCAGTGATGTTACGCGTGGAACTGGGCTGACCCATCGAGTGGGTAAAAGGTTTTGTGTTAAATCTGTTTATGTATTGGGCAAGATCTGGATGGACGAGAATATTAAGACCAAAAATCACACGAATAGTGTGATGTTTTTTTTAGTTAGGGATCGTAGACCCGTTGACAAGCCTCAAGATTTTGGTGAGGTTTTTAACATGTTTGATAATGAGCCCAGCACCGCGACTGTGAAGAATGTTCATCGTGATAGATACCAGGTATTAAGGAAGTGGCATGCAACTGTGACTGGTGGACAATATGCATCGAAGGAGCAGGCTCTCGTGAAGAAGTTTATTAGGGTTAATAATTATGTTGTGTACAACCAGCAAGAGGCTGGCAAGTATGAGAATCATTCTGAGAATGCGTTGATGTTGTATATGGCGTGTACGCACGCTTCTAATCCTGTGTATGCTACATTAAAGATACGGATCTACTTCTACGATTCAGTATCGAATTAATAAAGATTGAATTTTATTGAAGATGATTGTTCTACATATACAACATGATGTAATACATCCCATAATACATGATCAACTGCTCTAATGACATTGTTAATACTGATAACTCCTAAATTATCTAAATACTTAATAACTTGGGTCTTAAAGACCCTTAAGAAATGACCAGTCGGAGGCTGTGAGGTCGTCCAGATTCGGAAGGCTAGGAAACATTTGTGAATCCCCAGTGCTTTCCTCAGGTTGTGATTGAACTGTATCTGGACGGTGATGATGTCTTGGTTCATGAGAAATGGCCGGTTGTGGTGCTCTAAGATCTTGAAATAGAGGGGATTTTGAATCTTCCAGATATACACGCCATTCACTGCTTGAGCTGCAGTGATGGGTTCCCCGGTGCGTGAATCCATGGTTGTGGCAGTTGATGTGTACGTAGTATGAGCACCCACAGTTTAGATCAACCCTCTTACGCCGGATGGCTCTACGCTTAGCAGCTCTGTGTTGGACCTTGATTGGTACCTGAGTAGAGTGGGCTCTCGAGGGTGATGAATGTCGCATTCTTTAAAGCCCAATTTTTCAGTGCAGAATTCTTCTCTTCGTCCAAGAACTCTTTATAGCTTGAGTTGGGTCCTGGATTGCAGAGGAAGATAGTGGGAATGCCGCCTTTAATTTGAACTGGCTTTCCGTATTTCGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATGAATTCTTTAAAGTGCTTTAGGTAGTGGGGATCTACGTCATCAATCACGTTGTACCAGGCCTCGTTGCTGTAAACCTTAGGACTAAGGTCTAGATGACCACACAGGTAATTATGTGGACCCAAAGACCTAGCCCACATGGTCTTCCCCGTACGACTATCACCCTCTATGACAATACTTTTGGGTCTCAAAGGCCGCGCAGCGGCACCCATCACATTTTCAGACGCCCATTCCTCTATGGGCTGTGGAACTTGATCGAAGGAAGAAGAAGTAAAAGGAGAAACATAAACCTCCAGAGGAGGTGTGAAAATCCTATCTAAATTGGCATTTAAATTATGAAATTGTAATACATAATCCTTTGGAGCTAACTCCTTAATGACTCTGAGAGCCTCTGACTTACTGCCTGTGTTAAGCGCTGCGGCGTAAGCGTCGTTGGCCGTCTGTTGACCTCCTCTAGCAGATCGTCCGTCGATCTGAAACTCTCCCCATTCGAGGGTATCTCCGTCCTTCTCCAGATAGGACTTGACGTCCGAGCTTGATTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCTGGTTGGGGATACCAGGTCGAAGAATCTGTTATTCGTGCACTGGTACTTCCCTTCGAACTGGATGAGCACGTGAAGATGAGGTTCCCCATTTTCGTGGAGCTCTCTGCAGATCTTTATGTATTTTTTGTTTACTGGGGTTTGTAGGTTTTCTAATTGTGAGAGTGCTTCTTCTTTAGTGAGAGAGCATTTGGGATAAGTGAGGAAATAGTTTTTTGCATTTAACCTAAAAGCACGTGGCATTTTGGCAATCGGTGTACAAGCTAATTCTCTGCCAATCGGTGTATTGGGGTACAATATATAGGTGTACACCAAATGGCATTATTGTAATTTGGGAAAGAAATTCAAAAGATACACGCTCCAAAGCGGCCATCCGTCTAATATT
Gene Information
NCBI Accession
|
YP_009508357.1
|
Location
|
128-484 |
Protein Name
|
movement protein |
Coding Region
|
ATGTGGGATCCATTAGTAAACGAGTTTCCCGAAACCGTTCACGGTTTTCGATGTATGTTGGCAGTGAAATATCTCCAACTAGTTGCGGATACGTATTCCCCAGATACGGTGGGATACGATTTAATACGTGATTTAATTTGTATTCTACGTTCCAGGAATTATGTCGAAGCGCAAAGCAGATATAATCATTTCCACCCCAGGCTCGAAGGTTCGACGGAGGCTGAACTTCGACAGTCCAGGATCGAGCCGTGCTTATGTCCCTACTGTCCGCGTCACCAAATCAAGTCTATGGGCCAACAGACCCATGAACAGAAAGCCCAGGATGTACAGGATGTACAGAAGTCCAGATGTCCCTAG |
Protein Sequence
|
MWDPLVNEFPETVHGFRCMLAVKYLQLVADTYSPDTVGYDLIRDLICILRSRNYVEAQSRYNHFHPRLEGSTEAELRQSRIEPCLCPYCPRHQIKSMGQQTHEQKAQDVQDVQKSRCP |
NCBI Accession
|
YP_009508358.1
|
Location
|
288-1058 |
Protein Name
|
coat protein |
Coding Region
|
ATGTCGAAGCGCAAAGCAGATATAATCATTTCCACCCCAGGCTCGAAGGTTCGACGGAGGCTGAACTTCGACAGTCCAGGATCGAGCCGTGCTTATGTCCCTACTGTCCGCGTCACCAAATCAAGTCTATGGGCCAACAGACCCATGAACAGAAAGCCCAGGATGTACAGGATGTACAGAAGTCCAGATGTCCCTAGAGGATGTGAAGGCCCATGTAAGGTCCAGTCGTTTGAGTCCAGACATGATATTCAGCATATAGGTAAAGTTATGTGTGTCAGTGATGTTACGCGTGGAACTGGGCTGACCCATCGAGTGGGTAAAAGGTTTTGTGTTAAATCTGTTTATGTATTGGGCAAGATCTGGATGGACGAGAATATTAAGACCAAAAATCACACGAATAGTGTGATGTTTTTTTTAGTTAGGGATCGTAGACCCGTTGACAAGCCTCAAGATTTTGGTGAGGTTTTTAACATGTTTGATAATGAGCCCAGCACCGCGACTGTGAAGAATGTTCATCGTGATAGATACCAGGTATTAAGGAAGTGGCATGCAACTGTGACTGGTGGACAATATGCATCGAAGGAGCAGGCTCTCGTGAAGAAGTTTATTAGGGTTAATAATTATGTTGTGTACAACCAGCAAGAGGCTGGCAAGTATGAGAATCATTCTGAGAATGCGTTGATGTTGTATATGGCGTGTACGCACGCTTCTAATCCTGTGTATGCTACATTAAAGATACGGATCTACTTCTACGATTCAGTATCGAATTAA |
Protein Sequence
|
MSKRKADIIISTPGSKVRRRLNFDSPGSSRAYVPTVRVTKSSLWANRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGTGLTHRVGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEPSTATVKNVHRDRYQVLRKWHATVTGGQYASKEQALVKKFIRVNNYVVYNQQEAGKYENHSENALMLYMACTHASNPVYATLKIRIYFYDSVSN |
NCBI Accession
|
YP_009508359.1
|
Location
|
1055-1459 |
Protein Name
|
replication enhancer protein |
Coding Region
|
ATGGATTCACGCACCGGGGAACCCATCACTGCAGCTCAAGCAGTGAATGGCGTGTATATCTGGAAGATTCAAAATCCCCTCTATTTCAAGATCTTAGAGCACCACAACCGGCCATTTCTCATGAACCAAGACATCATCACCGTCCAGATACAGTTCAATCACAACCTGAGGAAAGCACTGGGGATTCACAAATGTTTCCTAGCCTTCCGAATCTGGACGACCTCACAGCCTCCGACTGGTCATTTCTTAAGGGTCTTTAAGACCCAAGTTATTAAGTATTTAGATAATTTAGGAGTTATCAGTATTAACAATGTCATTAGAGCAGTTGATCATGTATTATGGGATGTATTACATCATGTTGTATATGTAGAACAATCATCTTCAATAAAATTCAATCTTTATTAA |
Protein Sequence
|
MDSRTGEPITAAQAVNGVYIWKIQNPLYFKILEHHNRPFLMNQDIITVQIQFNHNLRKALGIHKCFLAFRIWTTSQPPTGHFLRVFKTQVIKYLDNLGVISINNVIRAVDHVLWDVLHHVVYVEQSSSIKFNLY |
NCBI Accession
|
YP_009508360.1
|
Location
|
1200-1607 |
Protein Name
|
transcriptional activator protein |
Coding Region
|
ATGCGACATTCATCACCCTCGAGAGCCCACTCTACTCAGGTACCAATCAAGGTCCAACACAGAGCTGCTAAGCGTAGAGCCATCCGGCGTAAGAGGGTTGATCTAAACTGTGGGTGCTCATACTACGTACACATCAACTGCCACAACCATGGATTCACGCACCGGGGAACCCATCACTGCAGCTCAAGCAGTGAATGGCGTGTATATCTGGAAGATTCAAAATCCCCTCTATTTCAAGATCTTAGAGCACCACAACCGGCCATTTCTCATGAACCAAGACATCATCACCGTCCAGATACAGTTCAATCACAACCTGAGGAAAGCACTGGGGATTCACAAATGTTTCCTAGCCTTCCGAATCTGGACGACCTCACAGCCTCCGACTGGTCATTTCTTAAGGGTCTTTAA |
Protein Sequence
|
MRHSSPSRAHSTQVPIKVQHRAAKRRAIRRKRVDLNCGCSYYVHINCHNHGFTHRGTHHCSSSSEWRVYLEDSKSPLFQDLRAPQPAISHEPRHHHRPDTVQSQPEESTGDSQMFPSLPNLDDLTASDWSFLKGL |
NCBI Accession
|
YP_009508361.1
|
Location
|
1537-2589 |
Protein Name
|
replication initiation protein |
Coding Region
|
ATGCCACGTGCTTTTAGGTTAAATGCAAAAAACTATTTCCTCACTTATCCCAAATGCTCTCTCACTAAAGAAGAAGCACTCTCACAATTAGAAAACCTACAAACCCCAGTAAACAAAAAATACATAAAGATCTGCAGAGAGCTCCACGAAAATGGGGAACCTCATCTTCACGTGCTCATCCAGTTCGAAGGGAAGTACCAGTGCACGAATAACAGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCAAGCTCGGACGTCAAGTCCTATCTGGAGAAGGACGGAGATACCCTCGAATGGGGAGAGTTTCAGATCGACGGACGATCTGCTAGAGGAGGTCAACAGACGGCCAACGACGCTTACGCCGCAGCGCTTAACACAGGCAGTAAGTCAGAGGCTCTCAGAGTCATTAAGGAGTTAGCTCCAAAGGATTATGTATTACAATTTCATAATTTAAATGCCAATTTAGATAGGATTTTCACACCTCCTCTGGAGGTTTATGTTTCTCCTTTTACTTCTTCTTCCTTCGATCAAGTTCCACAGCCCATAGAGGAATGGGCGTCTGAAAATGTGATGGGTGCCGCTGCGCGGCCTTTGAGACCCAAAAGTATTGTCATAGAGGGTGATAGTCGTACGGGGAAGACCATGTGGGCTAGGTCTTTGGGTCCACATAATTACCTGTGTGGTCATCTAGACCTTAGTCCTAAGGTTTACAGCAACGAGGCCTGGTACAACGTGATTGATGACGTAGATCCCCACTACCTAAAGCACTTTAAAGAATTCATGGGGGCCCAAAGGGACTGGCAAAGCAACACGAAATACGGAAAGCCAGTTCAAATTAAAGGCGGCATTCCCACTATCTTCCTCTGCAATCCAGGACCCAACTCAAGCTATAAAGAGTTCTTGGACGAAGAGAAGAATTCTGCACTGAAAAATTGGGCTTTAAAGAATGCGACATTCATCACCCTCGAGAGCCCACTCTACTCAGGTACCAATCAAGGTCCAACACAGAGCTGCTAA |
Protein Sequence
|
MPRAFRLNAKNYFLTYPKCSLTKEEALSQLENLQTPVNKKYIKICRELHENGEPHLHVLIQFEGKYQCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYLEKDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNTGSKSEALRVIKELAPKDYVLQFHNLNANLDRIFTPPLEVYVSPFTSSSFDQVPQPIEEWASENVMGAAARPLRPKSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNEAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNSALKNWALKNATFITLESPLYSGTNQGPTQSC |
NCBI Accession
|
YP_009508362.1
|
Location
|
2136-2438 |
Protein Name
|
AC4 |
Coding Region
|
ATGGGGAACCTCATCTTCACGTGCTCATCCAGTTCGAAGGGAAGTACCAGTGCACGAATAACAGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCAAGCTCGGACGTCAAGTCCTATCTGGAGAAGGACGGAGATACCCTCGAATGGGGAGAGTTTCAGATCGACGGACGATCTGCTAGAGGAGGTCAACAGACGGCCAACGACGCTTACGCCGCAGCGCTTAACACAGGCAGTAAGTCAGAGGCTCTCAGAGTCATTAAGGAGTTAG |
Protein Sequence
|
MGNLIFTCSSSSKGSTSARITDSSTWYPQPGQHISIRTFRELNQARTSSPIWRRTEIPSNGESFRSTDDLLEEVNRRPTTLTPQRLTQAVSQRLSESLRS |