Eupatorium yellow vein virus
Basic Information
Genus |
Begomovirus
|
NCBI Assembly |
GCF_002822325.1 |
Isolate |
Japan: Yamaguchi prefecture |
Release date |
2019/6/28 |
Submitter |
Kitamura,K., Murayama,A., Ikegami,M. |
Host |
|
Vector |
|
Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCCGATTTTTTTAATGAGCCCTCCTGTCGGTTGATCCTGACCATCCTTTGAAGCCTAATTAAATACTTGTCCCCTAAGTCTTTTTCGTATTTAAATACGTATGCCCTAGCTTTATACTTGTATAATGTGGGATCCATTGCTTAACGAATTCCCTGAAACCGTTCACGGTTTTAGGTGTATGCTTGCAATTAAATACCTACAAGGTGTCGAGTCTACGTATTCTCCAGATACGATAGGATACGATCTCATACGTGATCTTATTGCAGTCGTTCGTGCCAAGAACTATGTCGAAGCGTCCTGCCGATATAGTGATTTCCACACCCGCCTCCAAGGTACGTCGCCGGCTCAACTTCGACAGCCCGTATGTCAGCCGTGCGAATGCCCCCACTGTCCTCGTCACAAACAGAAGGAGAACATGGGCTCAAAGGCCCATGTATCGGAAGCCCAGGATGTACCGAATGTACAGAAGCCCTGATGTTCCTAAGGGTTGTGAAGGCCCGTGTAAGGTCCAGTCGTTTGAGAAGAAAAACGATGTTGGTCATTCTGGTACATTGTTATGTGTTTCTGATGTTACTCGTGGTAACGGTCTTACTCATCGTTCTGGGAAGAGATTTTGTATAAAATCTTGTTATATTATTGGTAAAATCTGGATGGATGAGAACATCAAGACTAAAAACCACACTAATACTGTCATGTTTTGGTTAGTTAGAGATAGACGTCCTGTTACTACTCCGTATGGATTTCAAGAGGCATTCAACATGTTTGATAATGAACCCAGTACAGCAACTATCAAGCAGGATCTAAGGGATCGTTTGCAGGTTCTACACAAGTTCAGTGCTACTGTCACTGGTGGACAGTATGCGTCTAAGGAACAGGCAATCGTCAAGAAGTTCTGGAAGTTGAATCATCATGTGACATACAACCATCAAGAGAGTGCTAAATATGAGAATCATACTGAGAATGCATTAATATTGTATATGGCTAGTACTCATGCCAGTAATCCCGTGTATGCAACTTTGAAAATCAGGATCTATTTTTATGATTCTGTTCAGAATTAATAAACTTTGAATTTTATATCATGAAATGTCTGTACATATATTGTTCCTTGCAATCTATTATACAAAACATGATCAACTGCTCTAATTACATTATTAATTGAAATCACACCCAAACTATCTAAGTAGTTCATTACTTGTGTCCTAAAGACCCTCAAGAAACGCCATGTCTGAGGATGTAAGCGACTCCAGATCTTGAAAATCAGGAAACACTTGTGCAAACCCAGCTGGGATCTCAGGTTGTGGTTGAACTGTATCTGTAATGTTATCACGTCCTGATCTCTGTTGAATGACTGTTGATCGTGCCTGGTGATTTTGAAATAGAGGGGATTTGGTACTGTCCAGATATACGCGCCACTCTGCGCCTGAGCTGCAGTAATGATGGTCCCTGTGCGTGAATCCATAATTTGCACAGTCTAAGCTCACGTAGACAGAACACCCGCAGCCTAGGTCAATCCTCCGCCTGCGAAGGTTCTTCTTCTTGGCTATCCTGTGCTGGACTTTGATGGGCACCTGAGTAGAGTGGGCTGTAGAGGGTGACGAAGGTTGCATTTTTTATAGCCCAGGCTTTTAATGCGGAGTTCTTTTCTTCGTCTAGAAACTCCGTATATGAAGACGTTGGTCCTGGATTGCAGAGGAAGATTGTTGGGATTCCACCTTTAATTTGAATTGGTCTCCCGTACTTCGTGTTGCTTTGCCAGTCCCTTTGGGCCCCCATGAATTCCTTGAAATGCTTTAGATAGTGGGGGTCTACATCATCAACGACGTTGTACCATGCGCCATTGCTGTAGATCTTCGGACTCAGGTCCAGATGACCACATAGATAGTTATGAGGACCCAATGACCTAGCCCACATTGTCTTGCCTGTCCTACTGTCACCCTCTATCACAATACTCATCGGTCTCCATGGCCGCGCAGCGGAAGACTTCACGTTTTCTGCAGCCCATTCCTCAATTTCCTCAGGAACTTGATCAAATGAAGAACTAGAAAAAGGACAAACAAAAACCTCCAACGGAGGAGCAAAAATCCTATCTAAATTGCTATTTAAATTATGAAACTGTAAAACATAATCTTTGGGAGCTTTCTCCCTTAATATATTGAGTGCCGATGACTTAGATCCTGAGTTGATTGCCTCGGCATATGCGTCGTTGGCATTTTGGCAACCTCCTCTAGCTGATCGTCCATCGACTTGGAAAACTCCAGAATCAAGGATGTCTCCGTCTTTCTCCATGTAGGTCTTGACATCTGACGAGCTTTTAGCCGCCTGAATGTTCGGATGGAAATGTGCTGATCTGTTTGGGGAAACGAGATCGAAGAATCTTTGATTTCTGCAGGTGTATTTGCCTTCGAACTGGATGAGGACGTGGAGATGAGGGCTCCCATCTTCGTGCAGTTCACGACAGATTCGTATAAACAATTTATTTGTTGGGGTTTGGAGTTGTTTGATCTGCGAGAGTGCTTCCTCTTTTGTAAGAGAGCAGTGTGGATATGTGAGAAAAAAGTTTTTCGCATTTATTTTAAAACGATTTGGAGTAGGCATGTTGACCGGTCAATCGGAGGCTCTCAAAGTTCTATGGAATTGGGGGCAATGGGGGCGCATTTATAGTATAGCCCCCAAATGGCATTTCCGTAATTTCTGGGGGTAGGAGCGTGTCTTTTTGAAATTCAAAATCGCCAAAGCGGCCATCCGTATAATATT
Gene Information
NCBI Accession
|
YP_009664841.1
|
Location
|
136-486 |
Gene Name
|
V2 |
Protein Name
|
hypothetical protein |
Coding Region
|
ATGTGGGATCCATTGCTTAACGAATTCCCTGAAACCGTTCACGGTTTTAGGTGTATGCTTGCAATTAAATACCTACAAGGTGTCGAGTCTACGTATTCTCCAGATACGATAGGATACGATCTCATACGTGATCTTATTGCAGTCGTTCGTGCCAAGAACTATGTCGAAGCGTCCTGCCGATATAGTGATTTCCACACCCGCCTCCAAGGTACGTCGCCGGCTCAACTTCGACAGCCCGTATGTCAGCCGTGCGAATGCCCCCACTGTCCTCGTCACAAACAGAAGGAGAACATGGGCTCAAAGGCCCATGTATCGGAAGCCCAGGATGTACCGAATGTACAGAAGCCCTGA |
Protein Sequence
|
MWDPLLNEFPETVHGFRCMLAIKYLQGVESTYSPDTIGYDLIRDLIAVVRAKNYVEASCRYSDFHTRLQGTSPAQLRQPVCQPCECPHCPRHKQKENMGSKAHVSEAQDVPNVQKP |
NCBI Accession
|
YP_009664842.1
|
Location
|
269-553 |
Gene Name
|
C5 |
Protein Name
|
hypothetical protein |
Coding Region
|
ATGACCAACATCGTTTTTCTTCTCAAACGACTGGACCTTACACGGGCCTTCACAACCCTTAGGAACATCAGGGCTTCTGTACATTCGGTACATCCTGGGCTTCCGATACATGGGCCTTTGAGCCCATGTTCTCCTTCTGTTTGTGACGAGGACAGTGGGGGCATTCGCACGGCTGACATACGGGCTGTCGAAGTTGAGCCGGCGACGTACCTTGGAGGCGGGTGTGGAAATCACTATATCGGCAGGACGCTTCGACATAGTTCTTGGCACGAACGACTGCAATAA |
Protein Sequence
|
MTNIVFLLKRLDLTRAFTTLRNIRASVHSVHPGLPIHGPLSPCSPSVCDEDSGGIRTADIRAVEVEPATYLGGGCGNHYIGRTLRHSSWHERLQ |
NCBI Accession
|
YP_009664843.1
|
Location
|
296-1069 |
Gene Name
|
V1 |
Protein Name
|
coat protein |
Coding Region
|
ATGTCGAAGCGTCCTGCCGATATAGTGATTTCCACACCCGCCTCCAAGGTACGTCGCCGGCTCAACTTCGACAGCCCGTATGTCAGCCGTGCGAATGCCCCCACTGTCCTCGTCACAAACAGAAGGAGAACATGGGCTCAAAGGCCCATGTATCGGAAGCCCAGGATGTACCGAATGTACAGAAGCCCTGATGTTCCTAAGGGTTGTGAAGGCCCGTGTAAGGTCCAGTCGTTTGAGAAGAAAAACGATGTTGGTCATTCTGGTACATTGTTATGTGTTTCTGATGTTACTCGTGGTAACGGTCTTACTCATCGTTCTGGGAAGAGATTTTGTATAAAATCTTGTTATATTATTGGTAAAATCTGGATGGATGAGAACATCAAGACTAAAAACCACACTAATACTGTCATGTTTTGGTTAGTTAGAGATAGACGTCCTGTTACTACTCCGTATGGATTTCAAGAGGCATTCAACATGTTTGATAATGAACCCAGTACAGCAACTATCAAGCAGGATCTAAGGGATCGTTTGCAGGTTCTACACAAGTTCAGTGCTACTGTCACTGGTGGACAGTATGCGTCTAAGGAACAGGCAATCGTCAAGAAGTTCTGGAAGTTGAATCATCATGTGACATACAACCATCAAGAGAGTGCTAAATATGAGAATCATACTGAGAATGCATTAATATTGTATATGGCTAGTACTCATGCCAGTAATCCCGTGTATGCAACTTTGAAAATCAGGATCTATTTTTATGATTCTGTTCAGAATTAA |
Protein Sequence
|
MSKRPADIVISTPASKVRRRLNFDSPYVSRANAPTVLVTNRRRTWAQRPMYRKPRMYRMYRSPDVPKGCEGPCKVQSFEKKNDVGHSGTLLCVSDVTRGNGLTHRSGKRFCIKSCYIIGKIWMDENIKTKNHTNTVMFWLVRDRRPVTTPYGFQEAFNMFDNEPSTATIKQDLRDRLQVLHKFSATVTGGQYASKEQAIVKKFWKLNHHVTYNHQESAKYENHTENALILYMASTHASNPVYATLKIRIYFYDSVQN |
NCBI Accession
|
YP_009664844.1
|
Location
|
1066-1470 |
Gene Name
|
C3 |
Protein Name
|
hypothetical protein |
Coding Region
|
ATGGATTCACGCACAGGGACCATCATTACTGCAGCTCAGGCGCAGAGTGGCGCGTATATCTGGACAGTACCAAATCCCCTCTATTTCAAAATCACCAGGCACGATCAACAGTCATTCAACAGAGATCAGGACGTGATAACATTACAGATACAGTTCAACCACAACCTGAGATCCCAGCTGGGTTTGCACAAGTGTTTCCTGATTTTCAAGATCTGGAGTCGCTTACATCCTCAGACATGGCGTTTCTTGAGGGTCTTTAGGACACAAGTAATGAACTACTTAGATAGTTTGGGTGTGATTTCAATTAATAATGTAATTAGAGCAGTTGATCATGTTTTGTATAATAGATTGCAAGGAACAATATATGTACAGACATTTCATGATATAAAATTCAAAGTTTATTAA |
Protein Sequence
|
MDSRTGTIITAAQAQSGAYIWTVPNPLYFKITRHDQQSFNRDQDVITLQIQFNHNLRSQLGLHKCFLIFKIWSRLHPQTWRFLRVFRTQVMNYLDSLGVISINNVIRAVDHVLYNRLQGTIYVQTFHDIKFKVY |
NCBI Accession
|
YP_009664845.1
|
Location
|
1211-1618 |
Gene Name
|
C2 |
Protein Name
|
hypothetical protein |
Coding Region
|
ATGCAACCTTCGTCACCCTCTACAGCCCACTCTACTCAGGTGCCCATCAAAGTCCAGCACAGGATAGCCAAGAAGAAGAACCTTCGCAGGCGGAGGATTGACCTAGGCTGCGGGTGTTCTGTCTACGTGAGCTTAGACTGTGCAAATTATGGATTCACGCACAGGGACCATCATTACTGCAGCTCAGGCGCAGAGTGGCGCGTATATCTGGACAGTACCAAATCCCCTCTATTTCAAAATCACCAGGCACGATCAACAGTCATTCAACAGAGATCAGGACGTGATAACATTACAGATACAGTTCAACCACAACCTGAGATCCCAGCTGGGTTTGCACAAGTGTTTCCTGATTTTCAAGATCTGGAGTCGCTTACATCCTCAGACATGGCGTTTCTTGAGGGTCTTTAG |
Protein Sequence
|
MQPSSPSTAHSTQVPIKVQHRIAKKKNLRRRRIDLGCGCSVYVSLDCANYGFTHRDHHYCSSGAEWRVYLDSTKSPLFQNHQARSTVIQQRSGRDNITDTVQPQPEIPAGFAQVFPDFQDLESLTSSDMAFLEGL |
NCBI Accession
|
YP_009664846.1
|
Location
|
1518-2606 |
Gene Name
|
C1 |
Protein Name
|
replication-associated protein |
Coding Region
|
ATGCCTACTCCAAATCGTTTTAAAATAAATGCGAAAAACTTTTTTCTCACATATCCACACTGCTCTCTTACAAAAGAGGAAGCACTCTCGCAGATCAAACAACTCCAAACCCCAACAAATAAATTGTTTATACGAATCTGTCGTGAACTGCACGAAGATGGGAGCCCTCATCTCCACGTCCTCATCCAGTTCGAAGGCAAATACACCTGCAGAAATCAAAGATTCTTCGATCTCGTTTCCCCAAACAGATCAGCACATTTCCATCCGAACATTCAGGCGGCTAAAAGCTCGTCAGATGTCAAGACCTACATGGAGAAAGACGGAGACATCCTTGATTCTGGAGTTTTCCAAGTCGATGGACGATCAGCTAGAGGAGGTTGCCAAAATGCCAACGACGCATATGCCGAGGCAATCAACTCAGGATCTAAGTCATCGGCACTCAATATATTAAGGGAGAAAGCTCCCAAAGATTATGTTTTACAGTTTCATAATTTAAATAGCAATTTAGATAGGATTTTTGCTCCTCCGTTGGAGGTTTTTGTTTGTCCTTTTTCTAGTTCTTCATTTGATCAAGTTCCTGAGGAAATTGAGGAATGGGCTGCAGAAAACGTGAAGTCTTCCGCTGCGCGGCCATGGAGACCGATGAGTATTGTGATAGAGGGTGACAGTAGGACAGGCAAGACAATGTGGGCTAGGTCATTGGGTCCTCATAACTATCTATGTGGTCATCTGGACCTGAGTCCGAAGATCTACAGCAATGGCGCATGGTACAACGTCGTTGATGATGTAGACCCCCACTATCTAAAGCATTTCAAGGAATTCATGGGGGCCCAAAGGGACTGGCAAAGCAACACGAAGTACGGGAGACCAATTCAAATTAAAGGTGGAATCCCAACAATCTTCCTCTGCAATCCAGGACCAACGTCTTCATATACGGAGTTTCTAGACGAAGAAAAGAACTCCGCATTAAAAGCCTGGGCTATAAAAAATGCAACCTTCGTCACCCTCTACAGCCCACTCTACTCAGGTGCCCATCAAAGTCCAGCACAGGATAGCCAAGAAGAAGAACCTTCGCAGGCGGAGGATTGA |
Protein Sequence
|
MPTPNRFKINAKNFFLTYPHCSLTKEEALSQIKQLQTPTNKLFIRICRELHEDGSPHLHVLIQFEGKYTCRNQRFFDLVSPNRSAHFHPNIQAAKSSSDVKTYMEKDGDILDSGVFQVDGRSARGGCQNANDAYAEAINSGSKSSALNILREKAPKDYVLQFHNLNSNLDRIFAPPLEVFVCPFSSSSFDQVPEEIEEWAAENVKSSAARPWRPMSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKIYSNGAWYNVVDDVDPHYLKHFKEFMGAQRDWQSNTKYGRPIQIKGGIPTIFLCNPGPTSSYTEFLDEEKNSALKAWAIKNATFVTLYSPLYSGAHQSPAQDSQEEEPSQAED |
NCBI Accession
|
YP_009664847.1
|
Location
|
2156-2578 |
Gene Name
|
C4 |
Protein Name
|
hypothetical protein |
Coding Region
|
ATGCGAAAAACTTTTTTCTCACATATCCACACTGCTCTCTTACAAAAGAGGAAGCACTCTCGCAGATCAAACAACTCCAAACCCCAACAAATAAATTGTTTATACGAATCTGTCGTGAACTGCACGAAGATGGGAGCCCTCATCTCCACGTCCTCATCCAGTTCGAAGGCAAATACACCTGCAGAAATCAAAGATTCTTCGATCTCGTTTCCCCAAACAGATCAGCACATTTCCATCCGAACATTCAGGCGGCTAAAAGCTCGTCAGATGTCAAGACCTACATGGAGAAAGACGGAGACATCCTTGATTCTGGAGTTTTCCAAGTCGATGGACGATCAGCTAGAGGAGGTTGCCAAAATGCCAACGACGCATATGCCGAGGCAATCAACTCAGGATCTAAGTCATCGGCACTCAATATATTAA |
Protein Sequence
|
MRKTFFSHIHTALLQKRKHSRRSNNSKPQQINCLYESVVNCTKMGALISTSSSSSKANTPAEIKDSSISFPQTDQHISIRTFRRLKARQMSRPTWRKTETSLILEFSKSMDDQLEEVAKMPTTHMPRQSTQDLSHRHSIY |