Emilia yellow vein Thailand virus
Basic Information
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCGATTTTTTTTTAGTGGGCCCCGCACACGCGCCTGTCCAATCTTATCCGTTGCTCAAAGCTTAATTATTAAATGGTCCCCTATAAAACTTGGTCCCTACGTTCTCGTTTTAAACATGTGGGATCCTTTATTAAACGAGTTTCCCGAAACCGTACACGGTTTTAGGTGTATGCTAGCAATTAAGTATTTGCAATTAGTAGAAAATACGTATTCTCCTGATACATTAGGTTACGATTTAATTCGTGATTTAATTCTAGTTATCCGTGCTAGGGATTATGTCGAAGCGTCCCGCAGATATAGTCATTTCCACTCCCGCATCCAAGGTACGTCGTCGGCTGAACTTCGACAGCCCGTATACCAGCCGTGCTGTTGCCCCCACTGTCCTCGTCACAAACAAAAGGAGGTCATGGGTGAATCGGCCCATGTACCGAAAGCCCAGGATGTACAGAATGTACAAAAGCCCTGATGTGCCCAAAGGATGTGAAGGCCCATGTAAGGTCCAGTCTTATGAACAGAGGCATGATATATCACATGTTGGTAAAGTATTATGTGTTAGTGATGTTACTCGTGGAAATGGGCTTACCCATCGTGTGGGTAAGAGGTTTTGTGTGAAGTCCATTTATGTGTTGGGCAAAATATGGATGGATGAAAATATTAAGACCAAGAATCATACTAATACTGTCATGTTCTATTTGGTCCGTGATAGAAGGCCTTTTGGTACTGCTATGGATTTTGGTCAGGTGTTTAACATGTATGACAATGAGCCCAGTACTGCTACTATCAAGAATGATCTTCGAGATCGTTATCAAGTTTTAAGGAAATTCACTTCAACAGTTACAGGTGGTCAATATGCTTCTAAGGAACAGGCGTTGGTTAAGAAATTTATGAAGATTAATAATTATGTAGTTTATAATCATCAAGAAGCTGCTAAGTATGACAACCATACTGAGAATGCCTTGTTATTGTATATGGCTTGTACTCATGCCAGTAATCCAGTGTATGCTACTTTAAAGATCAGAATCTATTTTTATGATTCTGTTCAGAATTAATAAATATTAAATTTTATTATGTGTGAAAATTGTACATCGATTGTTCCATCAATTACATTGTTTAATACATGATTACAAGCTCTAATTACATTGTTTATGCTAATTACACCTAAACTATTTAAATACTTCATACATTGATACTTAAATATTCTTAAGAAACGCCAAGTCGGAGGATGTAAACGAGTCCATATTTGGCAGGTTAGAAAACATTGATGTATCCCCAAAGCTTTCCTCAGGTTGTAGTTGAACTGGATCTGAACCGTTATTATGTCGTGGTTCCTCAGAAATGGTCTTTCCAGGTGTTGGGTTATCTTGAAATATAGGGGATTTGTTATCTCCCAGATATACACGCCACTCTCTGCTTGAGCTGCAGTGATGAGTTCCCCTGTGCGTGAATCCATATGAAGCGCAATTTATTGCGATGAAATATGAACACCCACACGGCAGGTCAACTCTCCTCCTGCGGACTGCCTTCTTCTTGGCGATTTGGTGTTGCACCTTGATAGGAACCTGAGTAGAGTGGGCTTTCGAGGGTGACGAAGATCGCATTCTTTGTGGCCCAATTCTTGAGTGCGGTATTCTTTTCTTCGTCCAAAAACTCTTTATAACTTGAGTTGGGCCCTGGATTGCAGAGGAAGATTGTGGGGATCCCTCCTTTAATTTGAACTGGCTTTCCGTATTTTGTATTGCTTTGCCAGTCCCTTTGGGCCCCCATAAATTCTTTAAAGTGCTTTAGATAGTGCGGATCAACGTCATCAATGACGTTGTACCACGCATTATTGCTGTACACTTTAGGGCTGAGGTCTAGATGGCCACACAAATAGTTGTGTGGTCCTAGTGATCTGGCCCACATTGTCTTCCCTGTCCTGCTATCACCCTCGATTACTATACTTACCGGTCTTAATGGCCGCGCAGCGGCACTGACGACATTATCGGCAGCCCATTCATCAAGTTCTTCTGGAACTTGATCAAAAGAAGAAGAAGAAAAAGGAGATATATATTCCTCTATTGGAGGAGTAAAAATCCTATCTAAATTACTAGTTAAATTATGAAATTGTAATACAAAATCTTTGGGAGCTTTCTCCCTTAATATATTGAGGGCCGCAGCTTTGGACCCTGAGTTGATTGCCTCGGCATATGCGTCGTTGGCAGTTTGGCAACCTCCTCTAGCCGATCTTCCATCGATTTGGAAAGATCCAAAATCAAGCACGTCTCCGTCTTTGTCCATGTAGGATTTAACATCTGACGAGCTTTTAGCTGCCTGAATGTTCGGATGGAAATGTGCTGACCTGGTTGGGGATGTGAGGTCGAAGAATCTGTTGTTCTGGCATTTGAATTTGCCTTCGAACTGGATGAGAACATGCAGGTGAGGATTCCCATCTTCGTGTAGTTCTCTGCAGATTCTTATGAACAATTTATTGGTTGGTGTTGTTAGGTTTTTTAATTGGGAAAGTGCTTCCTCTTTTGTTAGTGAGCATTGCGGGTATGTGAGGAAGTAATTTTTGGCATTTATTAAAAATTTTCTGGGTTGAGGCATGTTGACTTGGTCAATCGGGTCCTCTCAAACTTGTCTATGCAATTGGGGAATGGGTCCTTATTTATAGTTGAGGACCTAAATGGCATTATTGTAATTTTTAAAAAGAAATTCAAAATTCAAATCCCAAAAGCGGCCATCCGTATAATATT
Gene Information
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NCBI Accession
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ASL70127.1
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Location
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127-477 |
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Gene Name
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AV2 |
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Protein Name
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AV2 protein |
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Coding Region
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ATGTGGGATCCTTTATTAAACGAGTTTCCCGAAACCGTACACGGTTTTAGGTGTATGCTAGCAATTAAGTATTTGCAATTAGTAGAAAATACGTATTCTCCTGATACATTAGGTTACGATTTAATTCGTGATTTAATTCTAGTTATCCGTGCTAGGGATTATGTCGAAGCGTCCCGCAGATATAGTCATTTCCACTCCCGCATCCAAGGTACGTCGTCGGCTGAACTTCGACAGCCCGTATACCAGCCGTGCTGTTGCCCCCACTGTCCTCGTCACAAACAAAAGGAGGTCATGGGTGAATCGGCCCATGTACCGAAAGCCCAGGATGTACAGAATGTACAAAAGCCCTGA |
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Protein Sequence
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MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDLILVIRARDYVEASRRYSHFHSRIQGTSSAELRQPVYQPCCCPHCPRHKQKEVMGESAHVPKAQDVQNVQKP |
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NCBI Accession
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ASL70128.1
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Location
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287-1060 |
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Gene Name
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AV1 |
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Protein Name
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coat protein |
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Coding Region
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ATGTCGAAGCGTCCCGCAGATATAGTCATTTCCACTCCCGCATCCAAGGTACGTCGTCGGCTGAACTTCGACAGCCCGTATACCAGCCGTGCTGTTGCCCCCACTGTCCTCGTCACAAACAAAAGGAGGTCATGGGTGAATCGGCCCATGTACCGAAAGCCCAGGATGTACAGAATGTACAAAAGCCCTGATGTGCCCAAAGGATGTGAAGGCCCATGTAAGGTCCAGTCTTATGAACAGAGGCATGATATATCACATGTTGGTAAAGTATTATGTGTTAGTGATGTTACTCGTGGAAATGGGCTTACCCATCGTGTGGGTAAGAGGTTTTGTGTGAAGTCCATTTATGTGTTGGGCAAAATATGGATGGATGAAAATATTAAGACCAAGAATCATACTAATACTGTCATGTTCTATTTGGTCCGTGATAGAAGGCCTTTTGGTACTGCTATGGATTTTGGTCAGGTGTTTAACATGTATGACAATGAGCCCAGTACTGCTACTATCAAGAATGATCTTCGAGATCGTTATCAAGTTTTAAGGAAATTCACTTCAACAGTTACAGGTGGTCAATATGCTTCTAAGGAACAGGCGTTGGTTAAGAAATTTATGAAGATTAATAATTATGTAGTTTATAATCATCAAGAAGCTGCTAAGTATGACAACCATACTGAGAATGCCTTGTTATTGTATATGGCTTGTACTCATGCCAGTAATCCAGTGTATGCTACTTTAAAGATCAGAATCTATTTTTATGATTCTGTTCAGAATTAA |
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Protein Sequence
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MSKRPADIVISTPASKVRRRLNFDSPYTSRAVAPTVLVTNKRRSWVNRPMYRKPRMYRMYKSPDVPKGCEGPCKVQSYEQRHDISHVGKVLCVSDVTRGNGLTHRVGKRFCVKSIYVLGKIWMDENIKTKNHTNTVMFYLVRDRRPFGTAMDFGQVFNMYDNEPSTATIKNDLRDRYQVLRKFTSTVTGGQYASKEQALVKKFMKINNYVVYNHQEAAKYDNHTENALLLYMACTHASNPVYATLKIRIYFYDSVQN |
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NCBI Accession
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ASL70129.1
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Location
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1057-1461 |
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Gene Name
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AC3 |
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Protein Name
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replication enhancer protein |
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Coding Region
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ATGGATTCACGCACAGGGGAACTCATCACTGCAGCTCAAGCAGAGAGTGGCGTGTATATCTGGGAGATAACAAATCCCCTATATTTCAAGATAACCCAACACCTGGAAAGACCATTTCTGAGGAACCACGACATAATAACGGTTCAGATCCAGTTCAACTACAACCTGAGGAAAGCTTTGGGGATACATCAATGTTTTCTAACCTGCCAAATATGGACTCGTTTACATCCTCCGACTTGGCGTTTCTTAAGAATATTTAAGTATCAATGTATGAAGTATTTAAATAGTTTAGGTGTAATTAGCATAAACAATGTAATTAGAGCTTGTAATCATGTATTAAACAATGTAATTGATGGAACAATCGATGTACAATTTTCACACATAATAAAATTTAATATTTATTAA |
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Protein Sequence
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MDSRTGELITAAQAESGVYIWEITNPLYFKITQHLERPFLRNHDIITVQIQFNYNLRKALGIHQCFLTCQIWTRLHPPTWRFLRIFKYQCMKYLNSLGVISINNVIRACNHVLNNVIDGTIDVQFSHIIKFNIY |
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NCBI Accession
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ASL70130.1
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Location
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1202-1609 |
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Gene Name
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AC2 |
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Protein Name
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transcriptional activator protein |
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Coding Region
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ATGCGATCTTCGTCACCCTCGAAAGCCCACTCTACTCAGGTTCCTATCAAGGTGCAACACCAAATCGCCAAGAAGAAGGCAGTCCGCAGGAGGAGAGTTGACCTGCCGTGTGGGTGTTCATATTTCATCGCAATAAATTGCGCTTCATATGGATTCACGCACAGGGGAACTCATCACTGCAGCTCAAGCAGAGAGTGGCGTGTATATCTGGGAGATAACAAATCCCCTATATTTCAAGATAACCCAACACCTGGAAAGACCATTTCTGAGGAACCACGACATAATAACGGTTCAGATCCAGTTCAACTACAACCTGAGGAAAGCTTTGGGGATACATCAATGTTTTCTAACCTGCCAAATATGGACTCGTTTACATCCTCCGACTTGGCGTTTCTTAAGAATATTTAA |
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Protein Sequence
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MRSSSPSKAHSTQVPIKVQHQIAKKKAVRRRRVDLPCGCSYFIAINCASYGFTHRGTHHCSSSREWRVYLGDNKSPIFQDNPTPGKTISEEPRHNNGSDPVQLQPEESFGDTSMFSNLPNMDSFTSSDLAFLKNI |
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NCBI Accession
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ASL70132.1
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Location
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1509-2597 |
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Gene Name
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AC1 |
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Protein Name
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replication associated protein |
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Coding Region
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ATGCCTCAACCCAGAAAATTTTTAATAAATGCCAAAAATTACTTCCTCACATACCCGCAATGCTCACTAACAAAAGAGGAAGCACTTTCCCAATTAAAAAACCTAACAACACCAACCAATAAATTGTTCATAAGAATCTGCAGAGAACTACACGAAGATGGGAATCCTCACCTGCATGTTCTCATCCAGTTCGAAGGCAAATTCAAATGCCAGAACAACAGATTCTTCGACCTCACATCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGCAGCTAAAAGCTCGTCAGATGTTAAATCCTACATGGACAAAGACGGAGACGTGCTTGATTTTGGATCTTTCCAAATCGATGGAAGATCGGCTAGAGGAGGTTGCCAAACTGCCAACGACGCATATGCCGAGGCAATCAACTCAGGGTCCAAAGCTGCGGCCCTCAATATATTAAGGGAGAAAGCTCCCAAAGATTTTGTATTACAATTTCATAATTTAACTAGTAATTTAGATAGGATTTTTACTCCTCCAATAGAGGAATATATATCTCCTTTTTCTTCTTCTTCTTTTGATCAAGTTCCAGAAGAACTTGATGAATGGGCTGCCGATAATGTCGTCAGTGCCGCTGCGCGGCCATTAAGACCGGTAAGTATAGTAATCGAGGGTGATAGCAGGACAGGGAAGACAATGTGGGCCAGATCACTAGGACCACACAACTATTTGTGTGGCCATCTAGACCTCAGCCCTAAAGTGTACAGCAATAATGCGTGGTACAACGTCATTGATGACGTTGATCCGCACTATCTAAAGCACTTTAAAGAATTTATGGGGGCCCAAAGGGACTGGCAAAGCAATACAAAATACGGAAAGCCAGTTCAAATTAAAGGAGGGATCCCCACAATCTTCCTCTGCAATCCAGGGCCCAACTCAAGTTATAAAGAGTTTTTGGACGAAGAAAAGAATACCGCACTCAAGAATTGGGCCACAAAGAATGCGATCTTCGTCACCCTCGAAAGCCCACTCTACTCAGGTTCCTATCAAGGTGCAACACCAAATCGCCAAGAAGAAGGCAGTCCGCAGGAGGAGAGTTGA |
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Protein Sequence
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MPQPRKFLINAKNYFLTYPQCSLTKEEALSQLKNLTTPTNKLFIRICRELHEDGNPHLHVLIQFEGKFKCQNNRFFDLTSPTRSAHFHPNIQAAKSSSDVKSYMDKDGDVLDFGSFQIDGRSARGGCQTANDAYAEAINSGSKAAALNILREKAPKDFVLQFHNLTSNLDRIFTPPIEEYISPFSSSSFDQVPEELDEWAADNVVSAAARPLRPVSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNNAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNTALKNWATKNAIFVTLESPLYSGSYQGATPNRQEEGSPQEES |
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NCBI Accession
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ASL70131.1
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Location
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2147-2440 |
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Gene Name
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AC4 |
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Protein Name
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AC4 protein |
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Coding Region
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ATGGGAATCCTCACCTGCATGTTCTCATCCAGTTCGAAGGCAAATTCAAATGCCAGAACAACAGATTCTTCGACCTCACATCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGCAGCTAAAAGCTCGTCAGATGTTAAATCCTACATGGACAAAGACGGAGACGTGCTTGATTTTGGATCTTTCCAAATCGATGGAAGATCGGCTAGAGGAGGTTGCCAAACTGCCAACGACGCATATGCCGAGGCAATCAACTCAGGGTCCAAAGCTGCGGCCCTCAATATATTAA |
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Protein Sequence
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MGILTCMFSSSSKANSNARTTDSSTSHPQPGQHISIRTFRQLKARQMLNPTWTKTETCLILDLSKSMEDRLEEVAKLPTTHMPRQSTQGPKLRPSIY |