Eclipta yellow vein virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_000895255.1
Isolate Pakistan
Release date 2015/2/22
Submitter Khatri,S.M., Nawaz-ul-Rehman,M.S., Fauquet,C.M.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_016660
ACCGGATGGCCGCGCGATTTTTTTGTGGGTCCCTCCACTAACTCTTGTCTGCCAATCATATGACGCGCTGAAAGCTTAAATAATTATCCCGCCTATTATAAGTACTTCGTCGCTAAGTTATAGTTTGAAAAATGTGGGATCCACTGTTAAACGAGTTCCCTGAGACTGTTCACGGGTTTCGTTGCATGCTTGCGATTAAATATCTTCAACAACTGTCTGAAGAATACTCACCTGATACGGTAGGTTACGATCTAATTCGCGATTTAATTTCTATTTTACGTTCCAGGAATTATGTCGAAGCGTCCTGCCGATATCGTCATTTCTACCCCCGCGTCGAAGGTGCGTCGTCGACTGAACTTCGACAGCCCCTATGCAACCCGTGCAGTTGTCCCCACTGTCCGCGTCACAAAGTCTCGCATGTGGGCGAACAGGCCCATGAACCGGAAGCCCAGAATGTACAGGATGTACAGAAGCCCTGATGTTCCAAGAGGCTGTGAGGGTCCGTGTAAGGTCCAATCCTTTGAGTCCAGACACGATGTAGTCCATATAGGTAAGGTCATGTGTATTAGTGATGTTACTCGCGGTACTGGGCTGACCCATAGAGTTGGGAAACGTTTCTGTGTTAAATCAGTCTATGTATTGGGTAAGATCTGGATGGATGAAAACATAAAGTCCAAAAACCACACTAACAATGTGATGTTCTTCTTGGTCCGTGATCGACGGCCTGTGGATAAGCCTCAGGATTTTGGAGAGGTCTTCAACATGTTTGACAACGAGCCCAGCACCGCTACTGTCAAGAATGTTCATCGAGATCGCTACCAGGTGTTGAGGAAATGGTATGCAACAGTTACGGGTGGTCAATATGGAGCTAAGGAACAGGCCTTGGTCAAGAAGTTTGTCCGAGTTAACAATTATGTTGTTTACAATCAGCAAGAGGCAGGGAAATATGAGAATCATTCTGAGAATGCCCTGATGTTGTATATGGCATGTACTCATGCCTCTAATCCAGTTTACGCCACTCTTAAGATTAGGATCTACTTCTACGATTCTGTAACCAATTGATATTAATAAAGATCGAATTTTATTTCTGAATTCATGTCTACGTACATAGTTTGTTCTATTTTATTGTACAATACATGATCTACTGCTCTAATAATCGAATTAATTGAGATTACACCCAGATTGTTGAGATACTTGAGGACTTGGGTCTTGAATACCTTTAAGAAAAGACCAGTCGGAGGGTGTAAGGTCGTCCAGATTTGGAAGGTCAGAAAACATTTGTGCACTCCCAGAGCTCTCCGAAGGTTGTAGTTGAATTGGATTCTGATCTTTATTAAGTCCATATTGGTCGTGAATGGCCGGTTGTCGTGGCTGAGGATCTTGAAATATAGGGGATTTGGAACGTCCCAGATATAGGCGCCATTCCATGCTTGAGCTGCAGTGATGGGTTCCCCTGTGCGTAAATCCATGGTTGAAGCAGTTAATAGATAAATAATAAGAACACCCGCATTCAAGATCTACTCTCCTCCTCCTGTTGCGCCTCTTCGCTTCCCTGTGCTGTACTTTGATTGGAACCTGAGTACAGTGGTCCCTCAAGGGTGACGAAGATCGCATTCTTCACTGCCCAGTTCTTTAGTGCGGTGTTCTTTTCCTCATCTAGGAATTCTTTATAACTGCTGTTGGGACCAGGATTGCAGAGGAAGATTGTTGGTATTCCGCCTTTAATTTGAACTGGCTTCCCGTACTTTGTGTTGGATTGCCAGTCCCTTTGGGCCCCCATGAATTCTTTAAAGTGCTTGAGGAAGTGCGGATCTACGTCATCAATGACGTTATACCAAGCGTCGTTACTGTACACCTTTGGGCTTAGATCTAAATGCCCACATAAATAGTTATGTGGGCCTAAAGACCTAGCCCACATTGTCTTCCCAGTACGACTGTCACCCTCAATCACTATACTTTGAGGTCTCAAGGGCCGCGCAGCGGCACTGACGATGTTCTCGGCAGCCCACTCTTCAAGTTCTTCTGGAACTTGATCAAAGGAAGAGGAAGAAAAAGGAGAGACATAAACCTCCATTGGAGGTGTAAAAATCCTATCTAAATTAGCATTTAAATTATGAAATTGTAGTACATAATCTTTTGGTGCTAATTCTTTAATGATTCTAATAGCCTCTGACTTACTGCCTGCGTTAAGTGCTGCGGCGTAAGCGTCATTGGCTGACTGTTGTCCCCCTCTTGCAGATCTTCCATCGATCTGAAACTCTCCCCAGTCGAGGGTGTCTCCGTCCTTCTCGACGTATGACTTGACGTCCGAGCTTGATTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCTGGTTGGGGAGACCAAGTCGAAGAATCGGTGATTCGTGCACTGGTACTTTCCCTCGAACTGGATGAGCATGTGTAGATGAGGTTTCCCATTTTGATGAAGCTCTCTGCAGATCTTGATATATTTTATTGAAGTTGGGGTATTTAGGTTTTTGATTTGGGAAAGTGCTTCCTCTTTTGTTAGAGAGCAGTCGGGATAAGTGAGGAAGTAGTTTTTGGCGTTTAATTTAAAGGCACGTGGCATTTTGGCAATCGGTGTACACTCTAATTCTCTGGTAATCGGTGTAATGGGGTACAATATATAGGTGTACACCAAATGGCATTATTGTAATTTGGGAAAGTAATTCAAAATCCTCACGCTCCAAAAAGCGGCCATCCGTCTAATATT

Gene Information

NCBI Accession YP_005087576.1
Location 132-479
Protein Name V2
Coding Region ATGTGGGATCCACTGTTAAACGAGTTCCCTGAGACTGTTCACGGGTTTCGTTGCATGCTTGCGATTAAATATCTTCAACAACTGTCTGAAGAATACTCACCTGATACGGTAGGTTACGATCTAATTCGCGATTTAATTTCTATTTTACGTTCCAGGAATTATGTCGAAGCGTCCTGCCGATATCGTCATTTCTACCCCCGCGTCGAAGGTGCGTCGTCGACTGAACTTCGACAGCCCCTATGCAACCCGTGCAGTTGTCCCCACTGTCCGCGTCACAAAGTCTCGCATGTGGGCGAACAGGCCCATGAACCGGAAGCCCAGAATGTACAGGATGTACAGAAGCCCTGA
Protein Sequence MWDPLLNEFPETVHGFRCMLAIKYLQQLSEEYSPDTVGYDLIRDLISILRSRNYVEASCRYRHFYPRVEGASSTELRQPLCNPCSCPHCPRHKVSHVGEQAHEPEAQNVQDVQKP

NCBI Accession YP_005087577.1
Location 292-1062
Protein Name V1
Coding Region ATGTCGAAGCGTCCTGCCGATATCGTCATTTCTACCCCCGCGTCGAAGGTGCGTCGTCGACTGAACTTCGACAGCCCCTATGCAACCCGTGCAGTTGTCCCCACTGTCCGCGTCACAAAGTCTCGCATGTGGGCGAACAGGCCCATGAACCGGAAGCCCAGAATGTACAGGATGTACAGAAGCCCTGATGTTCCAAGAGGCTGTGAGGGTCCGTGTAAGGTCCAATCCTTTGAGTCCAGACACGATGTAGTCCATATAGGTAAGGTCATGTGTATTAGTGATGTTACTCGCGGTACTGGGCTGACCCATAGAGTTGGGAAACGTTTCTGTGTTAAATCAGTCTATGTATTGGGTAAGATCTGGATGGATGAAAACATAAAGTCCAAAAACCACACTAACAATGTGATGTTCTTCTTGGTCCGTGATCGACGGCCTGTGGATAAGCCTCAGGATTTTGGAGAGGTCTTCAACATGTTTGACAACGAGCCCAGCACCGCTACTGTCAAGAATGTTCATCGAGATCGCTACCAGGTGTTGAGGAAATGGTATGCAACAGTTACGGGTGGTCAATATGGAGCTAAGGAACAGGCCTTGGTCAAGAAGTTTGTCCGAGTTAACAATTATGTTGTTTACAATCAGCAAGAGGCAGGGAAATATGAGAATCATTCTGAGAATGCCCTGATGTTGTATATGGCATGTACTCATGCCTCTAATCCAGTTTACGCCACTCTTAAGATTAGGATCTACTTCTACGATTCTGTAACCAATTGA
Protein Sequence MSKRPADIVISTPASKVRRRLNFDSPYATRAVVPTVRVTKSRMWANRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGTGLTHRVGKRFCVKSVYVLGKIWMDENIKSKNHTNNVMFFLVRDRRPVDKPQDFGEVFNMFDNEPSTATVKNVHRDRYQVLRKWYATVTGGQYGAKEQALVKKFVRVNNYVVYNQQEAGKYENHSENALMLYMACTHASNPVYATLKIRIYFYDSVTN

NCBI Accession YP_005087578.1
Location 1065-1469
Protein Name C3
Coding Region ATGGATTTACGCACAGGGGAACCCATCACTGCAGCTCAAGCATGGAATGGCGCCTATATCTGGGACGTTCCAAATCCCCTATATTTCAAGATCCTCAGCCACGACAACCGGCCATTCACGACCAATATGGACTTAATAAAGATCAGAATCCAATTCAACTACAACCTTCGGAGAGCTCTGGGAGTGCACAAATGTTTTCTGACCTTCCAAATCTGGACGACCTTACACCCTCCGACTGGTCTTTTCTTAAAGGTATTCAAGACCCAAGTCCTCAAGTATCTCAACAATCTGGGTGTAATCTCAATTAATTCGATTATTAGAGCAGTAGATCATGTATTGTACAATAAAATAGAACAAACTATGTACGTAGACATGAATTCAGAAATAAAATTCGATCTTTATTAA
Protein Sequence MDLRTGEPITAAQAWNGAYIWDVPNPLYFKILSHDNRPFTTNMDLIKIRIQFNYNLRRALGVHKCFLTFQIWTTLHPPTGLFLKVFKTQVLKYLNNLGVISINSIIRAVDHVLYNKIEQTMYVDMNSEIKFDLY

NCBI Accession YP_005087579.1
Location 1162-1614
Protein Name C2
Coding Region ATGCGATCTTCGTCACCCTTGAGGGACCACTGTACTCAGGTTCCAATCAAAGTACAGCACAGGGAAGCGAAGAGGCGCAACAGGAGGAGGAGAGTAGATCTTGAATGCGGGTGTTCTTATTATTTATCTATTAACTGCTTCAACCATGGATTTACGCACAGGGGAACCCATCACTGCAGCTCAAGCATGGAATGGCGCCTATATCTGGGACGTTCCAAATCCCCTATATTTCAAGATCCTCAGCCACGACAACCGGCCATTCACGACCAATATGGACTTAATAAAGATCAGAATCCAATTCAACTACAACCTTCGGAGAGCTCTGGGAGTGCACAAATGTTTTCTGACCTTCCAAATCTGGACGACCTTACACCCTCCGACTGGTCTTTTCTTAAAGGTATTCAAGACCCAAGTCCTCAAGTATCTCAACAATCTGGGTGTAATCTCAATTAA
Protein Sequence MRSSSPLRDHCTQVPIKVQHREAKRRNRRRRVDLECGCSYYLSINCFNHGFTHRGTHHCSSSMEWRLYLGRSKSPIFQDPQPRQPAIHDQYGLNKDQNPIQLQPSESSGSAQMFSDLPNLDDLTPSDWSFLKGIQDPSPQVSQQSGCNLN

NCBI Accession YP_005087580.1
Location 1511-2596
Protein Name C1
Coding Region ATGCCACGTGCCTTTAAATTAAACGCCAAAAACTACTTCCTCACTTATCCCGACTGCTCTCTAACAAAAGAGGAAGCACTTTCCCAAATCAAAAACCTAAATACCCCAACTTCAATAAAATATATCAAGATCTGCAGAGAGCTTCATCAAAATGGGAAACCTCATCTACACATGCTCATCCAGTTCGAGGGAAAGTACCAGTGCACGAATCACCGATTCTTCGACTTGGTCTCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCAAGCTCGGACGTCAAGTCATACGTCGAGAAGGACGGAGACACCCTCGACTGGGGAGAGTTTCAGATCGATGGAAGATCTGCAAGAGGGGGACAACAGTCAGCCAATGACGCTTACGCCGCAGCACTTAACGCAGGCAGTAAGTCAGAGGCTATTAGAATCATTAAAGAATTAGCACCAAAAGATTATGTACTACAATTTCATAATTTAAATGCTAATTTAGATAGGATTTTTACACCTCCAATGGAGGTTTATGTCTCTCCTTTTTCTTCCTCTTCCTTTGATCAAGTTCCAGAAGAACTTGAAGAGTGGGCTGCCGAGAACATCGTCAGTGCCGCTGCGCGGCCCTTGAGACCTCAAAGTATAGTGATTGAGGGTGACAGTCGTACTGGGAAGACAATGTGGGCTAGGTCTTTAGGCCCACATAACTATTTATGTGGGCATTTAGATCTAAGCCCAAAGGTGTACAGTAACGACGCTTGGTATAACGTCATTGATGACGTAGATCCGCACTTCCTCAAGCACTTTAAAGAATTCATGGGGGCCCAAAGGGACTGGCAATCCAACACAAAGTACGGGAAGCCAGTTCAAATTAAAGGCGGAATACCAACAATCTTCCTCTGCAATCCTGGTCCCAACAGCAGTTATAAAGAATTCCTAGATGAGGAAAAGAACACCGCACTAAAGAACTGGGCAGTGAAGAATGCGATCTTCGTCACCCTTGAGGGACCACTGTACTCAGGTTCCAATCAAAGTACAGCACAGGGAAGCGAAGAGGCGCAACAGGAGGAGGAGAGTAGATCTTGA
Protein Sequence MPRAFKLNAKNYFLTYPDCSLTKEEALSQIKNLNTPTSIKYIKICRELHQNGKPHLHMLIQFEGKYQCTNHRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYVEKDGDTLDWGEFQIDGRSARGGQQSANDAYAAALNAGSKSEAIRIIKELAPKDYVLQFHNLNANLDRIFTPPMEVYVSPFSSSSFDQVPEELEEWAAENIVSAAARPLRPQSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNTALKNWAVKNAIFVTLEGPLYSGSNQSTAQGSEEAQQEEESRS

NCBI Accession YP_005087581.1
Location 2143-2445
Protein Name C4
Coding Region ATGGGAAACCTCATCTACACATGCTCATCCAGTTCGAGGGAAAGTACCAGTGCACGAATCACCGATTCTTCGACTTGGTCTCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCAAGCTCGGACGTCAAGTCATACGTCGAGAAGGACGGAGACACCCTCGACTGGGGAGAGTTTCAGATCGATGGAAGATCTGCAAGAGGGGGACAACAGTCAGCCAATGACGCTTACGCCGCAGCACTTAACGCAGGCAGTAAGTCAGAGGCTATTAGAATCATTAAAGAATTAG
Protein Sequence MGNLIYTCSSSSRESTSARITDSSTWSPQPGQHISIRTFRELNQARTSSHTSRRTETPSTGESFRSMEDLQEGDNSQPMTLTPQHLTQAVSQRLLESLKN