Eclipta yellow vein virus
Basic Information
Genus |
Begomovirus
|
NCBI Assembly |
GCF_000895255.1 |
Isolate |
Pakistan |
Release date |
2015/2/22 |
Submitter |
Khatri,S.M., Nawaz-ul-Rehman,M.S., Fauquet,C.M. |
Host |
|
Vector |
|
Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCGCGATTTTTTTGTGGGTCCCTCCACTAACTCTTGTCTGCCAATCATATGACGCGCTGAAAGCTTAAATAATTATCCCGCCTATTATAAGTACTTCGTCGCTAAGTTATAGTTTGAAAAATGTGGGATCCACTGTTAAACGAGTTCCCTGAGACTGTTCACGGGTTTCGTTGCATGCTTGCGATTAAATATCTTCAACAACTGTCTGAAGAATACTCACCTGATACGGTAGGTTACGATCTAATTCGCGATTTAATTTCTATTTTACGTTCCAGGAATTATGTCGAAGCGTCCTGCCGATATCGTCATTTCTACCCCCGCGTCGAAGGTGCGTCGTCGACTGAACTTCGACAGCCCCTATGCAACCCGTGCAGTTGTCCCCACTGTCCGCGTCACAAAGTCTCGCATGTGGGCGAACAGGCCCATGAACCGGAAGCCCAGAATGTACAGGATGTACAGAAGCCCTGATGTTCCAAGAGGCTGTGAGGGTCCGTGTAAGGTCCAATCCTTTGAGTCCAGACACGATGTAGTCCATATAGGTAAGGTCATGTGTATTAGTGATGTTACTCGCGGTACTGGGCTGACCCATAGAGTTGGGAAACGTTTCTGTGTTAAATCAGTCTATGTATTGGGTAAGATCTGGATGGATGAAAACATAAAGTCCAAAAACCACACTAACAATGTGATGTTCTTCTTGGTCCGTGATCGACGGCCTGTGGATAAGCCTCAGGATTTTGGAGAGGTCTTCAACATGTTTGACAACGAGCCCAGCACCGCTACTGTCAAGAATGTTCATCGAGATCGCTACCAGGTGTTGAGGAAATGGTATGCAACAGTTACGGGTGGTCAATATGGAGCTAAGGAACAGGCCTTGGTCAAGAAGTTTGTCCGAGTTAACAATTATGTTGTTTACAATCAGCAAGAGGCAGGGAAATATGAGAATCATTCTGAGAATGCCCTGATGTTGTATATGGCATGTACTCATGCCTCTAATCCAGTTTACGCCACTCTTAAGATTAGGATCTACTTCTACGATTCTGTAACCAATTGATATTAATAAAGATCGAATTTTATTTCTGAATTCATGTCTACGTACATAGTTTGTTCTATTTTATTGTACAATACATGATCTACTGCTCTAATAATCGAATTAATTGAGATTACACCCAGATTGTTGAGATACTTGAGGACTTGGGTCTTGAATACCTTTAAGAAAAGACCAGTCGGAGGGTGTAAGGTCGTCCAGATTTGGAAGGTCAGAAAACATTTGTGCACTCCCAGAGCTCTCCGAAGGTTGTAGTTGAATTGGATTCTGATCTTTATTAAGTCCATATTGGTCGTGAATGGCCGGTTGTCGTGGCTGAGGATCTTGAAATATAGGGGATTTGGAACGTCCCAGATATAGGCGCCATTCCATGCTTGAGCTGCAGTGATGGGTTCCCCTGTGCGTAAATCCATGGTTGAAGCAGTTAATAGATAAATAATAAGAACACCCGCATTCAAGATCTACTCTCCTCCTCCTGTTGCGCCTCTTCGCTTCCCTGTGCTGTACTTTGATTGGAACCTGAGTACAGTGGTCCCTCAAGGGTGACGAAGATCGCATTCTTCACTGCCCAGTTCTTTAGTGCGGTGTTCTTTTCCTCATCTAGGAATTCTTTATAACTGCTGTTGGGACCAGGATTGCAGAGGAAGATTGTTGGTATTCCGCCTTTAATTTGAACTGGCTTCCCGTACTTTGTGTTGGATTGCCAGTCCCTTTGGGCCCCCATGAATTCTTTAAAGTGCTTGAGGAAGTGCGGATCTACGTCATCAATGACGTTATACCAAGCGTCGTTACTGTACACCTTTGGGCTTAGATCTAAATGCCCACATAAATAGTTATGTGGGCCTAAAGACCTAGCCCACATTGTCTTCCCAGTACGACTGTCACCCTCAATCACTATACTTTGAGGTCTCAAGGGCCGCGCAGCGGCACTGACGATGTTCTCGGCAGCCCACTCTTCAAGTTCTTCTGGAACTTGATCAAAGGAAGAGGAAGAAAAAGGAGAGACATAAACCTCCATTGGAGGTGTAAAAATCCTATCTAAATTAGCATTTAAATTATGAAATTGTAGTACATAATCTTTTGGTGCTAATTCTTTAATGATTCTAATAGCCTCTGACTTACTGCCTGCGTTAAGTGCTGCGGCGTAAGCGTCATTGGCTGACTGTTGTCCCCCTCTTGCAGATCTTCCATCGATCTGAAACTCTCCCCAGTCGAGGGTGTCTCCGTCCTTCTCGACGTATGACTTGACGTCCGAGCTTGATTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCTGGTTGGGGAGACCAAGTCGAAGAATCGGTGATTCGTGCACTGGTACTTTCCCTCGAACTGGATGAGCATGTGTAGATGAGGTTTCCCATTTTGATGAAGCTCTCTGCAGATCTTGATATATTTTATTGAAGTTGGGGTATTTAGGTTTTTGATTTGGGAAAGTGCTTCCTCTTTTGTTAGAGAGCAGTCGGGATAAGTGAGGAAGTAGTTTTTGGCGTTTAATTTAAAGGCACGTGGCATTTTGGCAATCGGTGTACACTCTAATTCTCTGGTAATCGGTGTAATGGGGTACAATATATAGGTGTACACCAAATGGCATTATTGTAATTTGGGAAAGTAATTCAAAATCCTCACGCTCCAAAAAGCGGCCATCCGTCTAATATT
Gene Information
NCBI Accession
|
YP_005087576.1
|
Location
|
132-479 |
Protein Name
|
V2 |
Coding Region
|
ATGTGGGATCCACTGTTAAACGAGTTCCCTGAGACTGTTCACGGGTTTCGTTGCATGCTTGCGATTAAATATCTTCAACAACTGTCTGAAGAATACTCACCTGATACGGTAGGTTACGATCTAATTCGCGATTTAATTTCTATTTTACGTTCCAGGAATTATGTCGAAGCGTCCTGCCGATATCGTCATTTCTACCCCCGCGTCGAAGGTGCGTCGTCGACTGAACTTCGACAGCCCCTATGCAACCCGTGCAGTTGTCCCCACTGTCCGCGTCACAAAGTCTCGCATGTGGGCGAACAGGCCCATGAACCGGAAGCCCAGAATGTACAGGATGTACAGAAGCCCTGA |
Protein Sequence
|
MWDPLLNEFPETVHGFRCMLAIKYLQQLSEEYSPDTVGYDLIRDLISILRSRNYVEASCRYRHFYPRVEGASSTELRQPLCNPCSCPHCPRHKVSHVGEQAHEPEAQNVQDVQKP |
NCBI Accession
|
YP_005087577.1
|
Location
|
292-1062 |
Protein Name
|
V1 |
Coding Region
|
ATGTCGAAGCGTCCTGCCGATATCGTCATTTCTACCCCCGCGTCGAAGGTGCGTCGTCGACTGAACTTCGACAGCCCCTATGCAACCCGTGCAGTTGTCCCCACTGTCCGCGTCACAAAGTCTCGCATGTGGGCGAACAGGCCCATGAACCGGAAGCCCAGAATGTACAGGATGTACAGAAGCCCTGATGTTCCAAGAGGCTGTGAGGGTCCGTGTAAGGTCCAATCCTTTGAGTCCAGACACGATGTAGTCCATATAGGTAAGGTCATGTGTATTAGTGATGTTACTCGCGGTACTGGGCTGACCCATAGAGTTGGGAAACGTTTCTGTGTTAAATCAGTCTATGTATTGGGTAAGATCTGGATGGATGAAAACATAAAGTCCAAAAACCACACTAACAATGTGATGTTCTTCTTGGTCCGTGATCGACGGCCTGTGGATAAGCCTCAGGATTTTGGAGAGGTCTTCAACATGTTTGACAACGAGCCCAGCACCGCTACTGTCAAGAATGTTCATCGAGATCGCTACCAGGTGTTGAGGAAATGGTATGCAACAGTTACGGGTGGTCAATATGGAGCTAAGGAACAGGCCTTGGTCAAGAAGTTTGTCCGAGTTAACAATTATGTTGTTTACAATCAGCAAGAGGCAGGGAAATATGAGAATCATTCTGAGAATGCCCTGATGTTGTATATGGCATGTACTCATGCCTCTAATCCAGTTTACGCCACTCTTAAGATTAGGATCTACTTCTACGATTCTGTAACCAATTGA |
Protein Sequence
|
MSKRPADIVISTPASKVRRRLNFDSPYATRAVVPTVRVTKSRMWANRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGTGLTHRVGKRFCVKSVYVLGKIWMDENIKSKNHTNNVMFFLVRDRRPVDKPQDFGEVFNMFDNEPSTATVKNVHRDRYQVLRKWYATVTGGQYGAKEQALVKKFVRVNNYVVYNQQEAGKYENHSENALMLYMACTHASNPVYATLKIRIYFYDSVTN |
NCBI Accession
|
YP_005087578.1
|
Location
|
1065-1469 |
Protein Name
|
C3 |
Coding Region
|
ATGGATTTACGCACAGGGGAACCCATCACTGCAGCTCAAGCATGGAATGGCGCCTATATCTGGGACGTTCCAAATCCCCTATATTTCAAGATCCTCAGCCACGACAACCGGCCATTCACGACCAATATGGACTTAATAAAGATCAGAATCCAATTCAACTACAACCTTCGGAGAGCTCTGGGAGTGCACAAATGTTTTCTGACCTTCCAAATCTGGACGACCTTACACCCTCCGACTGGTCTTTTCTTAAAGGTATTCAAGACCCAAGTCCTCAAGTATCTCAACAATCTGGGTGTAATCTCAATTAATTCGATTATTAGAGCAGTAGATCATGTATTGTACAATAAAATAGAACAAACTATGTACGTAGACATGAATTCAGAAATAAAATTCGATCTTTATTAA |
Protein Sequence
|
MDLRTGEPITAAQAWNGAYIWDVPNPLYFKILSHDNRPFTTNMDLIKIRIQFNYNLRRALGVHKCFLTFQIWTTLHPPTGLFLKVFKTQVLKYLNNLGVISINSIIRAVDHVLYNKIEQTMYVDMNSEIKFDLY |
NCBI Accession
|
YP_005087579.1
|
Location
|
1162-1614 |
Protein Name
|
C2 |
Coding Region
|
ATGCGATCTTCGTCACCCTTGAGGGACCACTGTACTCAGGTTCCAATCAAAGTACAGCACAGGGAAGCGAAGAGGCGCAACAGGAGGAGGAGAGTAGATCTTGAATGCGGGTGTTCTTATTATTTATCTATTAACTGCTTCAACCATGGATTTACGCACAGGGGAACCCATCACTGCAGCTCAAGCATGGAATGGCGCCTATATCTGGGACGTTCCAAATCCCCTATATTTCAAGATCCTCAGCCACGACAACCGGCCATTCACGACCAATATGGACTTAATAAAGATCAGAATCCAATTCAACTACAACCTTCGGAGAGCTCTGGGAGTGCACAAATGTTTTCTGACCTTCCAAATCTGGACGACCTTACACCCTCCGACTGGTCTTTTCTTAAAGGTATTCAAGACCCAAGTCCTCAAGTATCTCAACAATCTGGGTGTAATCTCAATTAA |
Protein Sequence
|
MRSSSPLRDHCTQVPIKVQHREAKRRNRRRRVDLECGCSYYLSINCFNHGFTHRGTHHCSSSMEWRLYLGRSKSPIFQDPQPRQPAIHDQYGLNKDQNPIQLQPSESSGSAQMFSDLPNLDDLTPSDWSFLKGIQDPSPQVSQQSGCNLN |
NCBI Accession
|
YP_005087580.1
|
Location
|
1511-2596 |
Protein Name
|
C1 |
Coding Region
|
ATGCCACGTGCCTTTAAATTAAACGCCAAAAACTACTTCCTCACTTATCCCGACTGCTCTCTAACAAAAGAGGAAGCACTTTCCCAAATCAAAAACCTAAATACCCCAACTTCAATAAAATATATCAAGATCTGCAGAGAGCTTCATCAAAATGGGAAACCTCATCTACACATGCTCATCCAGTTCGAGGGAAAGTACCAGTGCACGAATCACCGATTCTTCGACTTGGTCTCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCAAGCTCGGACGTCAAGTCATACGTCGAGAAGGACGGAGACACCCTCGACTGGGGAGAGTTTCAGATCGATGGAAGATCTGCAAGAGGGGGACAACAGTCAGCCAATGACGCTTACGCCGCAGCACTTAACGCAGGCAGTAAGTCAGAGGCTATTAGAATCATTAAAGAATTAGCACCAAAAGATTATGTACTACAATTTCATAATTTAAATGCTAATTTAGATAGGATTTTTACACCTCCAATGGAGGTTTATGTCTCTCCTTTTTCTTCCTCTTCCTTTGATCAAGTTCCAGAAGAACTTGAAGAGTGGGCTGCCGAGAACATCGTCAGTGCCGCTGCGCGGCCCTTGAGACCTCAAAGTATAGTGATTGAGGGTGACAGTCGTACTGGGAAGACAATGTGGGCTAGGTCTTTAGGCCCACATAACTATTTATGTGGGCATTTAGATCTAAGCCCAAAGGTGTACAGTAACGACGCTTGGTATAACGTCATTGATGACGTAGATCCGCACTTCCTCAAGCACTTTAAAGAATTCATGGGGGCCCAAAGGGACTGGCAATCCAACACAAAGTACGGGAAGCCAGTTCAAATTAAAGGCGGAATACCAACAATCTTCCTCTGCAATCCTGGTCCCAACAGCAGTTATAAAGAATTCCTAGATGAGGAAAAGAACACCGCACTAAAGAACTGGGCAGTGAAGAATGCGATCTTCGTCACCCTTGAGGGACCACTGTACTCAGGTTCCAATCAAAGTACAGCACAGGGAAGCGAAGAGGCGCAACAGGAGGAGGAGAGTAGATCTTGA |
Protein Sequence
|
MPRAFKLNAKNYFLTYPDCSLTKEEALSQIKNLNTPTSIKYIKICRELHQNGKPHLHMLIQFEGKYQCTNHRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYVEKDGDTLDWGEFQIDGRSARGGQQSANDAYAAALNAGSKSEAIRIIKELAPKDYVLQFHNLNANLDRIFTPPMEVYVSPFSSSSFDQVPEELEEWAAENIVSAAARPLRPQSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNTALKNWAVKNAIFVTLEGPLYSGSNQSTAQGSEEAQQEEESRS |
NCBI Accession
|
YP_005087581.1
|
Location
|
2143-2445 |
Protein Name
|
C4 |
Coding Region
|
ATGGGAAACCTCATCTACACATGCTCATCCAGTTCGAGGGAAAGTACCAGTGCACGAATCACCGATTCTTCGACTTGGTCTCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCAAGCTCGGACGTCAAGTCATACGTCGAGAAGGACGGAGACACCCTCGACTGGGGAGAGTTTCAGATCGATGGAAGATCTGCAAGAGGGGGACAACAGTCAGCCAATGACGCTTACGCCGCAGCACTTAACGCAGGCAGTAAGTCAGAGGCTATTAGAATCATTAAAGAATTAG |
Protein Sequence
|
MGNLIYTCSSSSRESTSARITDSSTWSPQPGQHISIRTFRELNQARTSSHTSRRTETPSTGESFRSMEDLQEGDNSQPMTLTPQHLTQAVSQRLLESLKN |