Ageratum enation virus
Basic Information
Genus |
Begomovirus
|
NCBI Assembly |
GCF_000859025.1 |
Isolate |
Nepal |
Release date |
2015/2/13 |
Submitter |
Briddon,R.W., Bull,S.E., Markham,P.G. |
Host |
|
Vector |
|
Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCGAATTTTTTGTGGCCCCCGCAACGCATTTACATGTGGACCAATGAAATTGGCTCCTCGTGGCTTAATTGTTTTGTGGTCCCCTATTTAAACTTGCTCACCAAGTAGTGCGCTCCGCACTATGTGGGATCCATTAGTAAACGAGTTTCCCGAAACCGTTCACGGTTTTAGATGTATGTTAGCAGTTAAATATCTGCAGTTAGTAGAGAAGACTTATTCGCCTGACACATTAGGGCACGATTTAATTAGGGATTTAATTTCAGTTATTAGGGCTAGAAATTATGTCGAAGCGACCAGCAGATATAATCATTTCCACGCCCGCTTCGAAGGGACGCCGACGTCTCAACTTCGACAGCCCATATGTGAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACCAAAGCAAGAGCATGGGCGAACAGGCCCATGAACAGAAAACCCAGGATGTACAGGATGTACAGAAGTCCTGATGTCCCTAGAGGATGTGAAGGTCCATGTAAGGGCCAGTCTTTTGAGTCTAGACATGACATTCAGCATATAGGTAAAGTTATGTGTGTCAGTGATGTTACGCGTGGAACTGGGCTGACTCATCGAGTGGGTAAAAGGTTTTGTGTTAAATCCGTTTATGTCTTGGGTAAGATCTGGATGGATGAAAATATTAAGACCAAGAACCACACTAACAGTGTTATGTTTTTTTTAGTTAGGGATCGTAGGCCTGTCGATAAACCTCAAGATTTTGGAGAGGTTTTTAACATGTTTGATAATGAGCCCAGTACGGCTACTGTGAAGAATGTTCATCGTGATAGGTATCAAGTGCTTCGGAAATGGCATGCAACTGTTACGGGTGGACAATATGCGTCAAAGGAACAAGCTCTTGTGAAGAAGTTTGTTAGGGTTAATAATTATGTTGTGTATAATCAGCAAGAAGCTGGCAAGTATGAGAATCATTCTGAGAATGCGTTAATGTTGTATATGGCATGTACTCATGCCTCTAACCCAGTGTATGCTACTTTGAAGATACGGATCTATTTCTATGATTCTGTAACAAATTAATAAATATTGAATTTTATTGAATAAGATTGGTCTACATATACAATGTGTTCTAATACATCCCATAATACATGATCAACTGCACGAATTACATTATTAATACTGATAATTCCTAAATTATTTAAATATTTAAGCACTTGGGTCTTAAAGACCCTTAAGAATTGCCCAGTCGGAGGCTGTGAAGTCATCCAGATTCGGTAGGCTAGAAAACACTTGTGTATCTCCAACGCTTTCCTCAGGTTGTAATTGAACTGTATTTGGACGGTGATGATGTCCTCTTTCATAAGAAATGGCCGGTTGTTGTGTTCTGTTATCTTGAAATACAGGGGATTTTGAATCTCCCAGATAAACACGCCATTCTCTGCTTGAGAAGCTTTGATGAGTTCCGCTGTGCGTGAATCCATGGTTGTGGCAGGCTAATGCTATGAAGTATGAACACCCACAAGGGAGATCAACACGTCGACGCCTCGTCCCCTTCTTGGCTAGCCTGTGCTGCACTTTGATTGGAACCTGAGTAGAGTGGGCCTTCGAGGGTGACGAAGATCGCATTCTTTAAAGCCCAATTTTTGAGAGCATTATTCTTCTCTTCATCCAAGAACTCTTTATAACTTGAATTAGGTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCGCCTTTAATTTGAACTGGCTTTCCGTACTTGGTATTTGATTGCCAGTCCCTTTGGGCCCCCATGAATTCCTTAAAGTGCTTTAGGTAGTGAGGATCTACGTCATCGATGATGTTATACCACGCATCATTGCTGTAAACTTTGGGGCTTAGATCTAAATGACCGCATAGGTAATTATGAGGCCCTAATGACCTAGCCCACATCGTTTTACCCGTACGACTGTCTCCCTCAATTACTATACTTTGAGGCCTCAGAGGCCGCGCAGCGGCATTCATGACATTTTCTGAGACCCATTCTTCAAGTTCTTCAGGAACTTGATCAAAAGAAGAAGATAAAAAAGGCGAAACATAAACCTCCAACGGAGGAGTAAAAATCCTATCTAAATTAGAATTTAAATTATGATATTGAAAAATAAATTTTTCTGGGAGTTTCTCCTTTATTATAGCCATTGCAGCTTCTTTAGAACCTGCATTTAGGGCTTCTGCAGCAGCATCATTAGCTGTCTGTTGACCTCCTCGTGCAGATCTCCCATCGATCTGGAACTCTCCCCATTCGAGGGTGTCTCCGTCCTTGTCGATGTAGGACTTGACGTCGGTGCTGGATTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCTGTTTGGGGAGACCAGGTCGAAGAATCGTTGATTCTTGCACTGATATTTCCCTTCGAACTGGATGAGCACATGGAGATGAGGGCTCCCATCTTCGTGTAGTTCTCTGCAGATCTTGATGTATTTTTTGTTTGTTGGGGGTTGGAGATTTAATAATTGGGAAAGTGCCTCTTCTTTAGTAAGGGAGCACTTGGGATAAGTGAGAAAATAATTTTTGGCATTTATTTTTAACCGATTCGGGGCTGCCATGTTGACTTAGTCAATCGGTGTCTCTCAACCTTCTCTATGTATCGGTGTATCGGAGTCCTATATATATGGAGACTCCAATGGCATAATTGTAATAACAAAACTTTAATTTGAAATCCTTAACGCTCCAAAGCGGCCATCCGTATAATATT
Gene Information
NCBI Accession
|
NP_598186.1
|
Location
|
133-480 |
Gene Name
|
V1 |
Protein Name
|
V1 protein |
Coding Region
|
ATGTGGGATCCATTAGTAAACGAGTTTCCCGAAACCGTTCACGGTTTTAGATGTATGTTAGCAGTTAAATATCTGCAGTTAGTAGAGAAGACTTATTCGCCTGACACATTAGGGCACGATTTAATTAGGGATTTAATTTCAGTTATTAGGGCTAGAAATTATGTCGAAGCGACCAGCAGATATAATCATTTCCACGCCCGCTTCGAAGGGACGCCGACGTCTCAACTTCGACAGCCCATATGTGAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACCAAAGCAAGAGCATGGGCGAACAGGCCCATGAACAGAAAACCCAGGATGTACAGGATGTACAGAAGTCCTGA |
Protein Sequence
|
MWDPLVNEFPETVHGFRCMLAVKYLQLVEKTYSPDTLGHDLIRDLISVIRARNYVEATSRYNHFHARFEGTPTSQLRQPICEPCCCPHCPRHQSKSMGEQAHEQKTQDVQDVQKS |
NCBI Accession
|
NP_598187.1
|
Location
|
293-1063 |
Gene Name
|
coat protein |
Protein Name
|
coat protein |
Coding Region
|
ATGTCGAAGCGACCAGCAGATATAATCATTTCCACGCCCGCTTCGAAGGGACGCCGACGTCTCAACTTCGACAGCCCATATGTGAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACCAAAGCAAGAGCATGGGCGAACAGGCCCATGAACAGAAAACCCAGGATGTACAGGATGTACAGAAGTCCTGATGTCCCTAGAGGATGTGAAGGTCCATGTAAGGGCCAGTCTTTTGAGTCTAGACATGACATTCAGCATATAGGTAAAGTTATGTGTGTCAGTGATGTTACGCGTGGAACTGGGCTGACTCATCGAGTGGGTAAAAGGTTTTGTGTTAAATCCGTTTATGTCTTGGGTAAGATCTGGATGGATGAAAATATTAAGACCAAGAACCACACTAACAGTGTTATGTTTTTTTTAGTTAGGGATCGTAGGCCTGTCGATAAACCTCAAGATTTTGGAGAGGTTTTTAACATGTTTGATAATGAGCCCAGTACGGCTACTGTGAAGAATGTTCATCGTGATAGGTATCAAGTGCTTCGGAAATGGCATGCAACTGTTACGGGTGGACAATATGCGTCAAAGGAACAAGCTCTTGTGAAGAAGTTTGTTAGGGTTAATAATTATGTTGTGTATAATCAGCAAGAAGCTGGCAAGTATGAGAATCATTCTGAGAATGCGTTAATGTTGTATATGGCATGTACTCATGCCTCTAACCCAGTGTATGCTACTTTGAAGATACGGATCTATTTCTATGATTCTGTAACAAATTAA |
Protein Sequence
|
MSKRPADIIISTPASKGRRRLNFDSPYVSRAAAPIVRVTKARAWANRPMNRKPRMYRMYRSPDVPRGCEGPCKGQSFESRHDIQHIGKVMCVSDVTRGTGLTHRVGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEPSTATVKNVHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENHSENALMLYMACTHASNPVYATLKIRIYFYDSVTN |
NCBI Accession
|
NP_598188.1
|
Location
|
1060-1464 |
Gene Name
|
C3 |
Protein Name
|
C3 protein |
Coding Region
|
ATGGATTCACGCACAGCGGAACTCATCAAAGCTTCTCAAGCAGAGAATGGCGTGTTTATCTGGGAGATTCAAAATCCCCTGTATTTCAAGATAACAGAACACAACAACCGGCCATTTCTTATGAAAGAGGACATCATCACCGTCCAAATACAGTTCAATTACAACCTGAGGAAAGCGTTGGAGATACACAAGTGTTTTCTAGCCTACCGAATCTGGATGACTTCACAGCCTCCGACTGGGCAATTCTTAAGGGTCTTTAAGACCCAAGTGCTTAAATATTTAAATAATTTAGGAATTATCAGTATTAATAATGTAATTCGTGCAGTTGATCATGTATTATGGGATGTATTAGAACACATTGTATATGTAGACCAATCTTATTCAATAAAATTCAATATTTATTAA |
Protein Sequence
|
MDSRTAELIKASQAENGVFIWEIQNPLYFKITEHNNRPFLMKEDIITVQIQFNYNLRKALEIHKCFLAYRIWMTSQPPTGQFLRVFKTQVLKYLNNLGIISINNVIRAVDHVLWDVLEHIVYVDQSYSIKFNIY |
NCBI Accession
|
NP_598189.1
|
Location
|
1205-1609 |
Gene Name
|
C2 |
Protein Name
|
C2 protein |
Coding Region
|
ATGCGATCTTCGTCACCCTCGAAGGCCCACTCTACTCAGGTTCCAATCAAAGTGCAGCACAGGCTAGCCAAGAAGGGGACGAGGCGTCGACGTGTTGATCTCCCTTGTGGGTGTTCATACTTCATAGCATTAGCCTGCCACAACCATGGATTCACGCACAGCGGAACTCATCAAAGCTTCTCAAGCAGAGAATGGCGTGTTTATCTGGGAGATTCAAAATCCCCTGTATTTCAAGATAACAGAACACAACAACCGGCCATTTCTTATGAAAGAGGACATCATCACCGTCCAAATACAGTTCAATTACAACCTGAGGAAAGCGTTGGAGATACACAAGTGTTTTCTAGCCTACCGAATCTGGATGACTTCACAGCCTCCGACTGGGCAATTCTTAAGGGTCTTTAA |
Protein Sequence
|
MRSSSPSKAHSTQVPIKVQHRLAKKGTRRRRVDLPCGCSYFIALACHNHGFTHSGTHQSFSSREWRVYLGDSKSPVFQDNRTQQPAISYERGHHHRPNTVQLQPEESVGDTQVFSSLPNLDDFTASDWAILKGL |
NCBI Accession
|
NP_598190.1
|
Location
|
1512-2597 |
Gene Name
|
Rep |
Protein Name
|
replication associated protein |
Coding Region
|
ATGGCAGCCCCGAATCGGTTAAAAATAAATGCCAAAAATTATTTTCTCACTTATCCCAAGTGCTCCCTTACTAAAGAAGAGGCACTTTCCCAATTATTAAATCTCCAACCCCCAACAAACAAAAAATACATCAAGATCTGCAGAGAACTACACGAAGATGGGAGCCCTCATCTCCATGTGCTCATCCAGTTCGAAGGGAAATATCAGTGCAAGAATCAACGATTCTTCGACCTGGTCTCCCCAAACAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCACCGACGTCAAGTCCTACATCGACAAGGACGGAGACACCCTCGAATGGGGAGAGTTCCAGATCGATGGGAGATCTGCACGAGGAGGTCAACAGACAGCTAATGATGCTGCTGCAGAAGCCCTAAATGCAGGTTCTAAAGAAGCTGCAATGGCTATAATAAAGGAGAAACTCCCAGAAAAATTTATTTTTCAATATCATAATTTAAATTCTAATTTAGATAGGATTTTTACTCCTCCGTTGGAGGTTTATGTTTCGCCTTTTTTATCTTCTTCTTTTGATCAAGTTCCTGAAGAACTTGAAGAATGGGTCTCAGAAAATGTCATGAATGCCGCTGCGCGGCCTCTGAGGCCTCAAAGTATAGTAATTGAGGGAGACAGTCGTACGGGTAAAACGATGTGGGCTAGGTCATTAGGGCCTCATAATTACCTATGCGGTCATTTAGATCTAAGCCCCAAAGTTTACAGCAATGATGCGTGGTATAACATCATCGATGACGTAGATCCTCACTACCTAAAGCACTTTAAGGAATTCATGGGGGCCCAAAGGGACTGGCAATCAAATACCAAGTACGGAAAGCCAGTTCAAATTAAAGGCGGAATTCCCACTATCTTCCTCTGCAATCCAGGACCTAATTCAAGTTATAAAGAGTTCTTGGATGAAGAGAAGAATAATGCTCTCAAAAATTGGGCTTTAAAGAATGCGATCTTCGTCACCCTCGAAGGCCCACTCTACTCAGGTTCCAATCAAAGTGCAGCACAGGCTAGCCAAGAAGGGGACGAGGCGTCGACGTGTTGA |
Protein Sequence
|
MAAPNRLKINAKNYFLTYPKCSLTKEEALSQLLNLQPPTNKKYIKICRELHEDGSPHLHVLIQFEGKYQCKNQRFFDLVSPNRSAHFHPNIQGAKSSTDVKSYIDKDGDTLEWGEFQIDGRSARGGQQTANDAAAEALNAGSKEAAMAIIKEKLPEKFIFQYHNLNSNLDRIFTPPLEVYVSPFLSSSFDQVPEELEEWVSENVMNAAARPLRPQSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNIIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNNALKNWALKNAIFVTLEGPLYSGSNQSAAQASQEGDEASTC |
NCBI Accession
|
NP_598191.1
|
Location
|
2183-2440 |
Gene Name
|
C4 |
Protein Name
|
C4 protein |
Coding Region
|
ATGGGAGCCCTCATCTCCATGTGCTCATCCAGTTCGAAGGGAAATATCAGTGCAAGAATCAACGATTCTTCGACCTGGTCTCCCCAAACAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCACCGACGTCAAGTCCTACATCGACAAGGACGGAGACACCCTCGAATGGGGAGAGTTCCAGATCGATGGGAGATCTGCACGAGGAGGTCAACAGACAGCTAATGATGCTGCTGCAGAAGCCCTAA |
Protein Sequence
|
MGALISMCSSSSKGNISARINDSSTWSPQTGQHISIRTFRELNPAPTSSPTSTRTETPSNGESSRSMGDLHEEVNRQLMMLLQKP |