Ageratum enation virus


Basic Information

Genus Begomovirus
NCBI Assembly GCF_000859025.1
Isolate Nepal
Release date 2015/2/13
Submitter Briddon,R.W., Bull,S.E., Markham,P.G.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization


JBrowse


Genome

NC_003434
ACCGGATGGCCGCGAATTTTTTGTGGCCCCCGCAACGCATTTACATGTGGACCAATGAAATTGGCTCCTCGTGGCTTAATTGTTTTGTGGTCCCCTATTTAAACTTGCTCACCAAGTAGTGCGCTCCGCACTATGTGGGATCCATTAGTAAACGAGTTTCCCGAAACCGTTCACGGTTTTAGATGTATGTTAGCAGTTAAATATCTGCAGTTAGTAGAGAAGACTTATTCGCCTGACACATTAGGGCACGATTTAATTAGGGATTTAATTTCAGTTATTAGGGCTAGAAATTATGTCGAAGCGACCAGCAGATATAATCATTTCCACGCCCGCTTCGAAGGGACGCCGACGTCTCAACTTCGACAGCCCATATGTGAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACCAAAGCAAGAGCATGGGCGAACAGGCCCATGAACAGAAAACCCAGGATGTACAGGATGTACAGAAGTCCTGATGTCCCTAGAGGATGTGAAGGTCCATGTAAGGGCCAGTCTTTTGAGTCTAGACATGACATTCAGCATATAGGTAAAGTTATGTGTGTCAGTGATGTTACGCGTGGAACTGGGCTGACTCATCGAGTGGGTAAAAGGTTTTGTGTTAAATCCGTTTATGTCTTGGGTAAGATCTGGATGGATGAAAATATTAAGACCAAGAACCACACTAACAGTGTTATGTTTTTTTTAGTTAGGGATCGTAGGCCTGTCGATAAACCTCAAGATTTTGGAGAGGTTTTTAACATGTTTGATAATGAGCCCAGTACGGCTACTGTGAAGAATGTTCATCGTGATAGGTATCAAGTGCTTCGGAAATGGCATGCAACTGTTACGGGTGGACAATATGCGTCAAAGGAACAAGCTCTTGTGAAGAAGTTTGTTAGGGTTAATAATTATGTTGTGTATAATCAGCAAGAAGCTGGCAAGTATGAGAATCATTCTGAGAATGCGTTAATGTTGTATATGGCATGTACTCATGCCTCTAACCCAGTGTATGCTACTTTGAAGATACGGATCTATTTCTATGATTCTGTAACAAATTAATAAATATTGAATTTTATTGAATAAGATTGGTCTACATATACAATGTGTTCTAATACATCCCATAATACATGATCAACTGCACGAATTACATTATTAATACTGATAATTCCTAAATTATTTAAATATTTAAGCACTTGGGTCTTAAAGACCCTTAAGAATTGCCCAGTCGGAGGCTGTGAAGTCATCCAGATTCGGTAGGCTAGAAAACACTTGTGTATCTCCAACGCTTTCCTCAGGTTGTAATTGAACTGTATTTGGACGGTGATGATGTCCTCTTTCATAAGAAATGGCCGGTTGTTGTGTTCTGTTATCTTGAAATACAGGGGATTTTGAATCTCCCAGATAAACACGCCATTCTCTGCTTGAGAAGCTTTGATGAGTTCCGCTGTGCGTGAATCCATGGTTGTGGCAGGCTAATGCTATGAAGTATGAACACCCACAAGGGAGATCAACACGTCGACGCCTCGTCCCCTTCTTGGCTAGCCTGTGCTGCACTTTGATTGGAACCTGAGTAGAGTGGGCCTTCGAGGGTGACGAAGATCGCATTCTTTAAAGCCCAATTTTTGAGAGCATTATTCTTCTCTTCATCCAAGAACTCTTTATAACTTGAATTAGGTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCGCCTTTAATTTGAACTGGCTTTCCGTACTTGGTATTTGATTGCCAGTCCCTTTGGGCCCCCATGAATTCCTTAAAGTGCTTTAGGTAGTGAGGATCTACGTCATCGATGATGTTATACCACGCATCATTGCTGTAAACTTTGGGGCTTAGATCTAAATGACCGCATAGGTAATTATGAGGCCCTAATGACCTAGCCCACATCGTTTTACCCGTACGACTGTCTCCCTCAATTACTATACTTTGAGGCCTCAGAGGCCGCGCAGCGGCATTCATGACATTTTCTGAGACCCATTCTTCAAGTTCTTCAGGAACTTGATCAAAAGAAGAAGATAAAAAAGGCGAAACATAAACCTCCAACGGAGGAGTAAAAATCCTATCTAAATTAGAATTTAAATTATGATATTGAAAAATAAATTTTTCTGGGAGTTTCTCCTTTATTATAGCCATTGCAGCTTCTTTAGAACCTGCATTTAGGGCTTCTGCAGCAGCATCATTAGCTGTCTGTTGACCTCCTCGTGCAGATCTCCCATCGATCTGGAACTCTCCCCATTCGAGGGTGTCTCCGTCCTTGTCGATGTAGGACTTGACGTCGGTGCTGGATTTAGCTCCCTGAATGTTCGGATGGAAATGTGCTGACCTGTTTGGGGAGACCAGGTCGAAGAATCGTTGATTCTTGCACTGATATTTCCCTTCGAACTGGATGAGCACATGGAGATGAGGGCTCCCATCTTCGTGTAGTTCTCTGCAGATCTTGATGTATTTTTTGTTTGTTGGGGGTTGGAGATTTAATAATTGGGAAAGTGCCTCTTCTTTAGTAAGGGAGCACTTGGGATAAGTGAGAAAATAATTTTTGGCATTTATTTTTAACCGATTCGGGGCTGCCATGTTGACTTAGTCAATCGGTGTCTCTCAACCTTCTCTATGTATCGGTGTATCGGAGTCCTATATATATGGAGACTCCAATGGCATAATTGTAATAACAAAACTTTAATTTGAAATCCTTAACGCTCCAAAGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession NP_598186.1
Location 133-480
Gene Name V1
Protein Name V1 protein
Coding Region ATGTGGGATCCATTAGTAAACGAGTTTCCCGAAACCGTTCACGGTTTTAGATGTATGTTAGCAGTTAAATATCTGCAGTTAGTAGAGAAGACTTATTCGCCTGACACATTAGGGCACGATTTAATTAGGGATTTAATTTCAGTTATTAGGGCTAGAAATTATGTCGAAGCGACCAGCAGATATAATCATTTCCACGCCCGCTTCGAAGGGACGCCGACGTCTCAACTTCGACAGCCCATATGTGAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACCAAAGCAAGAGCATGGGCGAACAGGCCCATGAACAGAAAACCCAGGATGTACAGGATGTACAGAAGTCCTGA
Protein Sequence MWDPLVNEFPETVHGFRCMLAVKYLQLVEKTYSPDTLGHDLIRDLISVIRARNYVEATSRYNHFHARFEGTPTSQLRQPICEPCCCPHCPRHQSKSMGEQAHEQKTQDVQDVQKS

NCBI Accession NP_598187.1
Location 293-1063
Gene Name coat protein
Protein Name coat protein
Coding Region ATGTCGAAGCGACCAGCAGATATAATCATTTCCACGCCCGCTTCGAAGGGACGCCGACGTCTCAACTTCGACAGCCCATATGTGAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACCAAAGCAAGAGCATGGGCGAACAGGCCCATGAACAGAAAACCCAGGATGTACAGGATGTACAGAAGTCCTGATGTCCCTAGAGGATGTGAAGGTCCATGTAAGGGCCAGTCTTTTGAGTCTAGACATGACATTCAGCATATAGGTAAAGTTATGTGTGTCAGTGATGTTACGCGTGGAACTGGGCTGACTCATCGAGTGGGTAAAAGGTTTTGTGTTAAATCCGTTTATGTCTTGGGTAAGATCTGGATGGATGAAAATATTAAGACCAAGAACCACACTAACAGTGTTATGTTTTTTTTAGTTAGGGATCGTAGGCCTGTCGATAAACCTCAAGATTTTGGAGAGGTTTTTAACATGTTTGATAATGAGCCCAGTACGGCTACTGTGAAGAATGTTCATCGTGATAGGTATCAAGTGCTTCGGAAATGGCATGCAACTGTTACGGGTGGACAATATGCGTCAAAGGAACAAGCTCTTGTGAAGAAGTTTGTTAGGGTTAATAATTATGTTGTGTATAATCAGCAAGAAGCTGGCAAGTATGAGAATCATTCTGAGAATGCGTTAATGTTGTATATGGCATGTACTCATGCCTCTAACCCAGTGTATGCTACTTTGAAGATACGGATCTATTTCTATGATTCTGTAACAAATTAA
Protein Sequence MSKRPADIIISTPASKGRRRLNFDSPYVSRAAAPIVRVTKARAWANRPMNRKPRMYRMYRSPDVPRGCEGPCKGQSFESRHDIQHIGKVMCVSDVTRGTGLTHRVGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEPSTATVKNVHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENHSENALMLYMACTHASNPVYATLKIRIYFYDSVTN

NCBI Accession NP_598188.1
Location 1060-1464
Gene Name C3
Protein Name C3 protein
Coding Region ATGGATTCACGCACAGCGGAACTCATCAAAGCTTCTCAAGCAGAGAATGGCGTGTTTATCTGGGAGATTCAAAATCCCCTGTATTTCAAGATAACAGAACACAACAACCGGCCATTTCTTATGAAAGAGGACATCATCACCGTCCAAATACAGTTCAATTACAACCTGAGGAAAGCGTTGGAGATACACAAGTGTTTTCTAGCCTACCGAATCTGGATGACTTCACAGCCTCCGACTGGGCAATTCTTAAGGGTCTTTAAGACCCAAGTGCTTAAATATTTAAATAATTTAGGAATTATCAGTATTAATAATGTAATTCGTGCAGTTGATCATGTATTATGGGATGTATTAGAACACATTGTATATGTAGACCAATCTTATTCAATAAAATTCAATATTTATTAA
Protein Sequence MDSRTAELIKASQAENGVFIWEIQNPLYFKITEHNNRPFLMKEDIITVQIQFNYNLRKALEIHKCFLAYRIWMTSQPPTGQFLRVFKTQVLKYLNNLGIISINNVIRAVDHVLWDVLEHIVYVDQSYSIKFNIY

NCBI Accession NP_598189.1
Location 1205-1609
Gene Name C2
Protein Name C2 protein
Coding Region ATGCGATCTTCGTCACCCTCGAAGGCCCACTCTACTCAGGTTCCAATCAAAGTGCAGCACAGGCTAGCCAAGAAGGGGACGAGGCGTCGACGTGTTGATCTCCCTTGTGGGTGTTCATACTTCATAGCATTAGCCTGCCACAACCATGGATTCACGCACAGCGGAACTCATCAAAGCTTCTCAAGCAGAGAATGGCGTGTTTATCTGGGAGATTCAAAATCCCCTGTATTTCAAGATAACAGAACACAACAACCGGCCATTTCTTATGAAAGAGGACATCATCACCGTCCAAATACAGTTCAATTACAACCTGAGGAAAGCGTTGGAGATACACAAGTGTTTTCTAGCCTACCGAATCTGGATGACTTCACAGCCTCCGACTGGGCAATTCTTAAGGGTCTTTAA
Protein Sequence MRSSSPSKAHSTQVPIKVQHRLAKKGTRRRRVDLPCGCSYFIALACHNHGFTHSGTHQSFSSREWRVYLGDSKSPVFQDNRTQQPAISYERGHHHRPNTVQLQPEESVGDTQVFSSLPNLDDFTASDWAILKGL

NCBI Accession NP_598190.1
Location 1512-2597
Gene Name Rep
Protein Name replication associated protein
Coding Region ATGGCAGCCCCGAATCGGTTAAAAATAAATGCCAAAAATTATTTTCTCACTTATCCCAAGTGCTCCCTTACTAAAGAAGAGGCACTTTCCCAATTATTAAATCTCCAACCCCCAACAAACAAAAAATACATCAAGATCTGCAGAGAACTACACGAAGATGGGAGCCCTCATCTCCATGTGCTCATCCAGTTCGAAGGGAAATATCAGTGCAAGAATCAACGATTCTTCGACCTGGTCTCCCCAAACAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCACCGACGTCAAGTCCTACATCGACAAGGACGGAGACACCCTCGAATGGGGAGAGTTCCAGATCGATGGGAGATCTGCACGAGGAGGTCAACAGACAGCTAATGATGCTGCTGCAGAAGCCCTAAATGCAGGTTCTAAAGAAGCTGCAATGGCTATAATAAAGGAGAAACTCCCAGAAAAATTTATTTTTCAATATCATAATTTAAATTCTAATTTAGATAGGATTTTTACTCCTCCGTTGGAGGTTTATGTTTCGCCTTTTTTATCTTCTTCTTTTGATCAAGTTCCTGAAGAACTTGAAGAATGGGTCTCAGAAAATGTCATGAATGCCGCTGCGCGGCCTCTGAGGCCTCAAAGTATAGTAATTGAGGGAGACAGTCGTACGGGTAAAACGATGTGGGCTAGGTCATTAGGGCCTCATAATTACCTATGCGGTCATTTAGATCTAAGCCCCAAAGTTTACAGCAATGATGCGTGGTATAACATCATCGATGACGTAGATCCTCACTACCTAAAGCACTTTAAGGAATTCATGGGGGCCCAAAGGGACTGGCAATCAAATACCAAGTACGGAAAGCCAGTTCAAATTAAAGGCGGAATTCCCACTATCTTCCTCTGCAATCCAGGACCTAATTCAAGTTATAAAGAGTTCTTGGATGAAGAGAAGAATAATGCTCTCAAAAATTGGGCTTTAAAGAATGCGATCTTCGTCACCCTCGAAGGCCCACTCTACTCAGGTTCCAATCAAAGTGCAGCACAGGCTAGCCAAGAAGGGGACGAGGCGTCGACGTGTTGA
Protein Sequence MAAPNRLKINAKNYFLTYPKCSLTKEEALSQLLNLQPPTNKKYIKICRELHEDGSPHLHVLIQFEGKYQCKNQRFFDLVSPNRSAHFHPNIQGAKSSTDVKSYIDKDGDTLEWGEFQIDGRSARGGQQTANDAAAEALNAGSKEAAMAIIKEKLPEKFIFQYHNLNSNLDRIFTPPLEVYVSPFLSSSFDQVPEELEEWVSENVMNAAARPLRPQSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNIIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNNALKNWALKNAIFVTLEGPLYSGSNQSAAQASQEGDEASTC

NCBI Accession NP_598191.1
Location 2183-2440
Gene Name C4
Protein Name C4 protein
Coding Region ATGGGAGCCCTCATCTCCATGTGCTCATCCAGTTCGAAGGGAAATATCAGTGCAAGAATCAACGATTCTTCGACCTGGTCTCCCCAAACAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCACCGACGTCAAGTCCTACATCGACAAGGACGGAGACACCCTCGAATGGGGAGAGTTCCAGATCGATGGGAGATCTGCACGAGGAGGTCAACAGACAGCTAATGATGCTGCTGCAGAAGCCCTAA
Protein Sequence MGALISMCSSSSKGNISARINDSSTWSPQTGQHISIRTFRELNPAPTSSPTSTRTETPSNGESSRSMGDLHEEVNRQLMMLLQKP